RNA–Protein interactions for RNA: ENST00000590049.5

CAPNS1-209, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5

Gene CAPNS1, Length 592 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-209ENST00000590049 DDX56Q9NY93 547 aaKnown RBP11.79□□□□□ -0.52
CAPNS1-209ENST00000590049 SLC12A6Q9UHW9 1150 aa11.79□□□□□ -0.52
CAPNS1-209ENST00000590049 HEATR9A2RTY3 570 aa11.78□□□□□ -0.52
CAPNS1-209ENST00000590049 CACNG3O60359 315 aa11.78□□□□□ -0.52
CAPNS1-209ENST00000590049 LRCH4O75427 683 aa11.78□□□□□ -0.52
CAPNS1-209ENST00000590049 APOEP02649 317 aa11.78□□□□□ -0.52
CAPNS1-209ENST00000590049 FYNP06241 537 aa11.78□□□□□ -0.52
CAPNS1-209ENST00000590049 MBL2P11226 248 aaPredicted RBP11.78□□□□□ -0.52
CAPNS1-209ENST00000590049 TCP1P17987 556 aaKnown RBP11.78□□□□□ -0.52
CAPNS1-209ENST00000590049 CTNNA2P26232 953 aa11.78□□□□□ -0.52
CAPNS1-209ENST00000590049 MIPP30301 263 aa11.78□□□□□ -0.52
CAPNS1-209ENST00000590049 CCR1P32246 355 aa11.78□□□□□ -0.52
CAPNS1-209ENST00000590049 ADRA1BP35368 520 aa11.78□□□□□ -0.52
CAPNS1-209ENST00000590049 AIF1P55008 147 aa11.78□□□□□ -0.52
CAPNS1-209ENST00000590049 RWDD2BP57060 319 aa11.78□□□□□ -0.52
CAPNS1-209ENST00000590049 TBX4P57082 545 aa11.78□□□□□ -0.52
CAPNS1-209ENST00000590049 MTA1Q13330 715 aa11.78□□□□□ -0.52
CAPNS1-209ENST00000590049 ENPP2Q13822 863 aa11.78□□□□□ -0.52
CAPNS1-209ENST00000590049 BOLA3Q53S33 107 aa11.78□□□□□ -0.52
CAPNS1-209ENST00000590049 SEL1L2Q5TEA6 688 aa11.78□□□□□ -0.52
CAPNS1-209ENST00000590049 LRRC38Q5VT99 294 aa11.78□□□□□ -0.52
CAPNS1-209ENST00000590049 TRNP1Q6NT89 227 aa11.78□□□□□ -0.52
CAPNS1-209ENST00000590049 MSANTD2Q6P1R3 559 aa11.78□□□□□ -0.52
CAPNS1-209ENST00000590049 TAC4Q86UU9 113 aa11.78□□□□□ -0.52
CAPNS1-209ENST00000590049 CCDC50Q8IVM0 306 aa11.78□□□□□ -0.52
CAPNS1-209ENST00000590049 ZNF276Q8N554 614 aa11.78□□□□□ -0.52
CAPNS1-209ENST00000590049 IFI44Q8TCB0 444 aa11.78□□□□□ -0.52
CAPNS1-209ENST00000590049 PGAP3Q96FM1 320 aaPredicted RBP11.78□□□□□ -0.52
CAPNS1-209ENST00000590049 C5orf34Q96MH7 638 aa11.78□□□□□ -0.52
CAPNS1-209ENST00000590049 WDR24Q96S15 920 aa11.78□□□□□ -0.52
CAPNS1-209ENST00000590049 MARCH2Q9P0N8 246 aa11.78□□□□□ -0.52
CAPNS1-209ENST00000590049 PCSK1NQ9UHG2 260 aa11.78□□□□□ -0.52
CAPNS1-209ENST00000590049 SFMBT1Q9UHJ3 866 aa11.78□□□□□ -0.52
CAPNS1-209ENST00000590049 NUDT5Q9UKK9 219 aa11.78□□□□□ -0.52
CAPNS1-209ENST00000590049 PACSIN2Q9UNF0 486 aaPredicted RBP11.78□□□□□ -0.52
CAPNS1-209ENST00000590049 CSPG4Q6UVK1 2322 aa11.78□□□□□ -0.52
CAPNS1-209ENST00000590049 PLXNA2O75051 1894 aa11.78□□□□□ -0.52
CAPNS1-209ENST00000590049 SLC12A8A0AV02 714 aa11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 NVLO15381 856 aaKnown RBP11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 IRAK2O43187 625 aa11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 OLFM2O95897 454 aa11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 KRT1P04264 644 aa11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 ATP1A1P05023 1023 aaKnown RBP11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 CTNNA1P35221 906 aaKnown RBP11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 HDAC4P56524 1084 aa11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 COG7P83436 770 aa11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 NNTQ13423 1086 aa11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 KRT81Q14533 505 aa11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 EFHC2Q5JST6 749 aa11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 BRMS1LQ5PSV4 323 aa11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 ERMARDQ5T6L9 678 aa11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 CCDC181Q5TID7 509 aa11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 KLHDC10Q6PID8 442 aa11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 TAOK1Q7L7X3 1001 aa11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 POLNQ7Z5Q5 900 aa11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 FAM131BQ86XD5 332 aa11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 MAP7D3Q8IWC1 876 aa11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 UNC45BQ8IWX7 931 aa11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 FBXO39Q8N4B4 442 aa11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 ATP6V0D2Q8N8Y2 350 aa11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 KCTD6Q8NC69 237 aa11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 HSPH1Q92598 858 aa11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 CENPIQ92674 756 aaPredicted RBP11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 NT5C3BQ969T7 300 aa11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 HES6Q96HZ4 224 aa11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 RBM41Q96IZ5 413 aaKnown RBP11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 APOLD1Q96LR9 279 aa11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 CCSER2Q9H7U1 834 aa11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 LATS2Q9NRM7 1088 aa11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 OSER1Q9NX31 292 aa11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 THAP10Q9P2Z0 257 aaPredicted RBP11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 TLR6Q9Y2C9 796 aa11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 HBS1LQ9Y450 684 aaKnown RBP11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 PCDHA3Q9Y5H8 950 aa11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 SAR1BQ9Y6B6 198 aa11.77□□□□□ -0.53
CAPNS1-209ENST00000590049 COL27A1Q8IZC6 1860 aaPredicted RBP11.76□□□□□ -0.53
CAPNS1-209ENST00000590049 EFCAB7A8K855 629 aa11.76□□□□□ -0.53
CAPNS1-209ENST00000590049 NEDD8-MDP1E9PL57 170 aa11.76□□□□□ -0.53
CAPNS1-209ENST00000590049 FFAR2O15552 330 aa11.76□□□□□ -0.53
CAPNS1-209ENST00000590049 MSI1O43347 362 aaKnown RBP11.76□□□□□ -0.53
CAPNS1-209ENST00000590049 COCHO43405 550 aa11.76□□□□□ -0.53
CAPNS1-209ENST00000590049 URI1O94763 535 aaPredicted RBP11.76□□□□□ -0.53
CAPNS1-209ENST00000590049 ENDOD1O94919 500 aa11.76□□□□□ -0.53
CAPNS1-209ENST00000590049 ZRANB2O95218 330 aaKnown RBP eCLIP11.76□□□□□ -0.53
CAPNS1-209ENST00000590049 ALPPL2P10696 532 aa11.76□□□□□ -0.53
CAPNS1-209ENST00000590049 UGT1A5P35504 534 aa11.76□□□□□ -0.53
CAPNS1-209ENST00000590049 HARS2P49590 506 aaKnown RBP11.76□□□□□ -0.53
CAPNS1-209ENST00000590049 DGKGP49619 791 aa11.76□□□□□ -0.53
CAPNS1-209ENST00000590049 TAS2R40P59535 323 aa11.76□□□□□ -0.53
CAPNS1-209ENST00000590049 EIF3IQ13347 325 aaKnown RBP11.76□□□□□ -0.53
CAPNS1-209ENST00000590049 TUBB2AQ13885 445 aa11.76□□□□□ -0.53
CAPNS1-209ENST00000590049 TRIP4Q15650 581 aaPredicted RBP11.76□□□□□ -0.53
CAPNS1-209ENST00000590049 NUGGCQ68CJ6 796 aa11.76□□□□□ -0.53
CAPNS1-209ENST00000590049 SP5Q6BEB4 398 aaPredicted RBP11.76□□□□□ -0.53
CAPNS1-209ENST00000590049 GDF7Q7Z4P5 450 aa11.76□□□□□ -0.53
CAPNS1-209ENST00000590049 SPATS2Q86XZ4 545 aaKnown RBP11.76□□□□□ -0.53
CAPNS1-209ENST00000590049 TP53INP2Q8IXH6 220 aa11.76□□□□□ -0.53
CAPNS1-209ENST00000590049 OR2T3Q8NH03 318 aa11.76□□□□□ -0.53
CAPNS1-209ENST00000590049 TEKT4Q8WW24 435 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms