RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 CXorf40AQ8TE69 158 aa18.19■□□□□ 0.5
H3F3B-209ENST00000589949 LRRC61Q9BV99 259 aa18.19■□□□□ 0.5
H3F3B-209ENST00000589949 DHX35Q9H5Z1 703 aaKnown RBP18.19■□□□□ 0.5
H3F3B-209ENST00000589949 HAUS4Q9H6D7 363 aa18.19■□□□□ 0.5
H3F3B-209ENST00000589949 PCDH12Q9NPG4 1184 aa18.19■□□□□ 0.5
H3F3B-209ENST00000589949 PARVAQ9NVD7 372 aa18.19■□□□□ 0.5
H3F3B-209ENST00000589949 MYO6Q9UM54 1294 aa18.19■□□□□ 0.5
H3F3B-209ENST00000589949 FASNP49327 2511 aaKnown RBP18.19■□□□□ 0.5
H3F3B-209ENST00000589949 CPED1A4D0V7 1026 aa18.18■□□□□ 0.5
H3F3B-209ENST00000589949 H3BM21 787 aa18.18■□□□□ 0.5
H3F3B-209ENST00000589949 MUSKO15146 869 aa18.18■□□□□ 0.5
H3F3B-209ENST00000589949 CSO75390 466 aaKnown RBP18.18■□□□□ 0.5
H3F3B-209ENST00000589949 EIF4A3P38919 411 aaKnown RBP18.18■□□□□ 0.5
H3F3B-209ENST00000589949 NDST2P52849 883 aa18.18■□□□□ 0.5
H3F3B-209ENST00000589949 RAD51Q06609 339 aa18.18■□□□□ 0.5
H3F3B-209ENST00000589949 UGP2Q16851 508 aa18.18■□□□□ 0.5
H3F3B-209ENST00000589949 TBC1D25Q3MII6 688 aa18.18■□□□□ 0.5
H3F3B-209ENST00000589949 PERM1Q5SV97 790 aa18.18■□□□□ 0.5
H3F3B-209ENST00000589949 CRTC1Q6UUV9 634 aa18.18■□□□□ 0.5
H3F3B-209ENST00000589949 SLC35F3Q8IY50 421 aa18.18■□□□□ 0.5
H3F3B-209ENST00000589949 TSEN2Q8NCE0 465 aaKnown RBP18.18■□□□□ 0.5
H3F3B-209ENST00000589949 FGF11Q92914 225 aa18.18■□□□□ 0.5
H3F3B-209ENST00000589949 FUBP1Q96AE4 644 aaKnown RBP18.18■□□□□ 0.5
H3F3B-209ENST00000589949 BOCQ9BWV1 1114 aa18.18■□□□□ 0.5
H3F3B-209ENST00000589949 SUV39H2Q9H5I1 410 aa18.18■□□□□ 0.5
H3F3B-209ENST00000589949 PRORYQ9H606 182 aa18.18■□□□□ 0.5
H3F3B-209ENST00000589949 APOBEC3BQ9UH17 382 aaKnown RBP18.18■□□□□ 0.5
H3F3B-209ENST00000589949 MGAQ8IWI9 3026 aa18.17■□□□□ 0.5
H3F3B-209ENST00000589949 PMS2P1A4D2B8 440 aa18.17■□□□□ 0.5
H3F3B-209ENST00000589949 EEF2KO00418 725 aaKnown RBP18.17■□□□□ 0.5
H3F3B-209ENST00000589949 TPP1O14773 563 aa18.17■□□□□ 0.5
H3F3B-209ENST00000589949 USP12O75317 370 aa18.17■□□□□ 0.5
H3F3B-209ENST00000589949 MBD3O95983 291 aa18.17■□□□□ 0.5
H3F3B-209ENST00000589949 FTLP02792 175 aaPredicted RBP18.17■□□□□ 0.5
H3F3B-209ENST00000589949 SKILP12757 684 aa18.17■□□□□ 0.5
H3F3B-209ENST00000589949 C6P13671 934 aa18.17■□□□□ 0.5
H3F3B-209ENST00000589949 TCF4P15884 667 aa18.17■□□□□ 0.5
H3F3B-209ENST00000589949 TSHRP16473 764 aa18.17■□□□□ 0.5
H3F3B-209ENST00000589949 ERCC2P18074 760 aa18.17■□□□□ 0.5
H3F3B-209ENST00000589949 MIPP30301 263 aa18.17■□□□□ 0.5
H3F3B-209ENST00000589949 THOP1P52888 689 aa18.17■□□□□ 0.5
H3F3B-209ENST00000589949 ADKP55263 362 aaKnown RBP18.17■□□□□ 0.5
H3F3B-209ENST00000589949 YPEL5P62699 121 aa18.17■□□□□ 0.5
H3F3B-209ENST00000589949 TCEA2Q15560 299 aa18.17■□□□□ 0.5
H3F3B-209ENST00000589949 ASIC2Q16515 512 aa18.17■□□□□ 0.5
H3F3B-209ENST00000589949 ERMARDQ5T6L9 678 aa18.17■□□□□ 0.5
H3F3B-209ENST00000589949 MACC1Q6ZN28 852 aa18.17■□□□□ 0.5
H3F3B-209ENST00000589949 RFX8Q6ZV50 586 aa18.17■□□□□ 0.5
H3F3B-209ENST00000589949 EFL1Q7Z2Z2 1120 aaKnown RBP18.17■□□□□ 0.5
H3F3B-209ENST00000589949 MAPK15Q8TD08 544 aa18.17■□□□□ 0.5
H3F3B-209ENST00000589949 BPIFA3Q9BQP9 254 aa18.17■□□□□ 0.5
H3F3B-209ENST00000589949 USP29Q9HBJ7 922 aa18.17■□□□□ 0.5
H3F3B-209ENST00000589949 AIPL1Q9NZN9 384 aa18.17■□□□□ 0.5
H3F3B-209ENST00000589949 SALL4Q9UJQ4 1053 aa18.17■□□□□ 0.5
H3F3B-209ENST00000589949 PTPRQQ9UMZ3 2332 aa18.17■□□□□ 0.5
H3F3B-209ENST00000589949 RP1P56715 2156 aa18.16■□□□□ 0.5
H3F3B-209ENST00000589949 EME2A4GXA9 379 aaPredicted RBP18.16■□□□□ 0.5
H3F3B-209ENST00000589949 LMO7DNF2Z398 122 aa18.16■□□□□ 0.5
H3F3B-209ENST00000589949 RIOK3O14730 519 aaKnown RBP18.16■□□□□ 0.5
H3F3B-209ENST00000589949 YY2O15391 372 aa18.16■□□□□ 0.5
H3F3B-209ENST00000589949 CCDC172P0C7W6 258 aa18.16■□□□□ 0.5
H3F3B-209ENST00000589949 HTR7P34969 479 aa18.16■□□□□ 0.5
H3F3B-209ENST00000589949 MMP12P39900 470 aa18.16■□□□□ 0.5
H3F3B-209ENST00000589949 PRKCIP41743 596 aa18.16■□□□□ 0.5
H3F3B-209ENST00000589949 LIG3P49916 1009 aa18.16■□□□□ 0.5
H3F3B-209ENST00000589949 DUSP3P51452 185 aaPredicted RBP18.16■□□□□ 0.5
H3F3B-209ENST00000589949 CCDC173Q0VFZ6 552 aa18.16■□□□□ 0.5
H3F3B-209ENST00000589949 RALGDSQ12967 914 aa18.16■□□□□ 0.5
H3F3B-209ENST00000589949 PTK2BQ14289 1009 aa18.16■□□□□ 0.5
H3F3B-209ENST00000589949 ISXQ2M1V0 245 aa18.16■□□□□ 0.5
H3F3B-209ENST00000589949 ALG11Q2TAA5 492 aa18.16■□□□□ 0.5
H3F3B-209ENST00000589949 FAXCQ5TGI0 409 aa18.16■□□□□ 0.5
H3F3B-209ENST00000589949 SRLQ86TD4 932 aa18.16■□□□□ 0.5
H3F3B-209ENST00000589949 PLA2G15Q8NCC3 412 aa18.16■□□□□ 0.5
H3F3B-209ENST00000589949 HCAR2Q8TDS4 363 aa18.16■□□□□ 0.5
H3F3B-209ENST00000589949 TSACCQ96A04 125 aaPredicted RBP18.16■□□□□ 0.5
H3F3B-209ENST00000589949 DEPDC7Q96QD5 511 aa18.16■□□□□ 0.5
H3F3B-209ENST00000589949 IL12RB2Q99665 862 aa18.16■□□□□ 0.5
H3F3B-209ENST00000589949 NCAPGQ9BPX3 1015 aa18.16■□□□□ 0.5
H3F3B-209ENST00000589949 ABCG4Q9H172 646 aa18.16■□□□□ 0.5
H3F3B-209ENST00000589949 CWC15Q9P013 229 aaKnown RBP18.16■□□□□ 0.5
H3F3B-209ENST00000589949 SPASTQ9UBP0 616 aa18.16■□□□□ 0.5
H3F3B-209ENST00000589949 OR1A2Q9Y585 309 aa18.16■□□□□ 0.5
H3F3B-209ENST00000589949 A0A1B0GTH6 734 aa18.15■□□□□ 0.5
H3F3B-209ENST00000589949 TTC24A2A3L6 582 aaPredicted RBP18.15■□□□□ 0.5
H3F3B-209ENST00000589949 GOLGA6L22H0YM25 854 aa18.15■□□□□ 0.5
H3F3B-209ENST00000589949 LZTS3O60299 673 aaPredicted RBP18.15■□□□□ 0.5
H3F3B-209ENST00000589949 LRCH4O75427 683 aa18.15■□□□□ 0.5
H3F3B-209ENST00000589949 GM2AP17900 193 aa18.15■□□□□ 0.5
H3F3B-209ENST00000589949 IL1R2P27930 398 aa18.15■□□□□ 0.5
H3F3B-209ENST00000589949 GABREP78334 506 aa18.15■□□□□ 0.5
H3F3B-209ENST00000589949 TLE3Q04726 772 aa18.15■□□□□ 0.5
H3F3B-209ENST00000589949 DPYSQ14117 519 aa18.15■□□□□ 0.5
H3F3B-209ENST00000589949 INPP5AQ14642 412 aa18.15■□□□□ 0.5
H3F3B-209ENST00000589949 LRRC14Q15048 493 aa18.15■□□□□ 0.5
H3F3B-209ENST00000589949 NR0B2Q15466 257 aa18.15■□□□□ 0.5
H3F3B-209ENST00000589949 PPP6R3Q5H9R7 873 aaPredicted RBP18.15■□□□□ 0.5
H3F3B-209ENST00000589949 SPACA3Q8IXA5 215 aa18.15■□□□□ 0.5
H3F3B-209ENST00000589949 BTN2A2Q8WVV5 523 aa18.15■□□□□ 0.5
H3F3B-209ENST00000589949 HIC2Q96JB3 615 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms