RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 LENG8Q96PV6 779 aaPredicted RBP16.58■□□□□ 0.24
DNMT1-221ENST00000589538 C1QTNF2Q9BXJ5 285 aa16.58■□□□□ 0.24
DNMT1-221ENST00000589538 BRD8Q9H0E9 1235 aa16.58■□□□□ 0.24
DNMT1-221ENST00000589538 ERVMER34-1Q9H9K5 563 aa16.58■□□□□ 0.24
DNMT1-221ENST00000589538 SCUBE2Q9NQ36 999 aa16.58■□□□□ 0.24
DNMT1-221ENST00000589538 GDF3Q9NR23 364 aa16.58■□□□□ 0.24
DNMT1-221ENST00000589538 TFR2Q9UP52 801 aa16.58■□□□□ 0.24
DNMT1-221ENST00000589538 HS3ST3A1Q9Y663 406 aa16.58■□□□□ 0.24
DNMT1-221ENST00000589538 ANKRD36A6QL64 1941 aa16.58■□□□□ 0.24
DNMT1-221ENST00000589538 PPP1R12AO14974 1030 aaPredicted RBP16.57■□□□□ 0.24
DNMT1-221ENST00000589538 MUSKO15146 869 aa16.57■□□□□ 0.24
DNMT1-221ENST00000589538 CEACAM1P13688 526 aa16.57■□□□□ 0.24
DNMT1-221ENST00000589538 CR2P20023 1033 aa16.57■□□□□ 0.24
DNMT1-221ENST00000589538 NR2C2P49116 596 aa16.57■□□□□ 0.24
DNMT1-221ENST00000589538 PDK1Q15118 436 aa16.57■□□□□ 0.24
DNMT1-221ENST00000589538 TAZQ16635 292 aa16.57■□□□□ 0.24
DNMT1-221ENST00000589538 TMEM52BQ4KMG9 183 aa16.57■□□□□ 0.24
DNMT1-221ENST00000589538 TFDP3Q5H9I0 405 aa16.57■□□□□ 0.24
DNMT1-221ENST00000589538 SEL1L3Q68CR1 1132 aa16.57■□□□□ 0.24
DNMT1-221ENST00000589538 MFSD7Q6UXD7 560 aa16.57■□□□□ 0.24
DNMT1-221ENST00000589538 DCP2Q8IU60 420 aaKnown RBP16.57■□□□□ 0.24
DNMT1-221ENST00000589538 PLD5Q8N7P1 536 aa16.57■□□□□ 0.24
DNMT1-221ENST00000589538 CCNYQ8ND76 341 aa16.57■□□□□ 0.24
DNMT1-221ENST00000589538 DENND6BQ8NEG7 585 aa16.57■□□□□ 0.24
DNMT1-221ENST00000589538 KIAA1524Q8TCG1 905 aa16.57■□□□□ 0.24
DNMT1-221ENST00000589538 SPOCK2Q92563 424 aa16.57■□□□□ 0.24
DNMT1-221ENST00000589538 ECHDC3Q96DC8 303 aa16.57■□□□□ 0.24
DNMT1-221ENST00000589538 KLHDC7BQ96G42 594 aa16.57■□□□□ 0.24
DNMT1-221ENST00000589538 POLR1EQ9GZS1 481 aaKnown RBP16.57■□□□□ 0.24
DNMT1-221ENST00000589538 TM7SF3Q9NS93 570 aa16.57■□□□□ 0.24
DNMT1-221ENST00000589538 SALL4Q9UJQ4 1053 aa16.57■□□□□ 0.24
DNMT1-221ENST00000589538 ATP8A1Q9Y2Q0 1164 aa16.57■□□□□ 0.24
DNMT1-221ENST00000589538 HEY1Q9Y5J3 304 aa16.57■□□□□ 0.24
DNMT1-221ENST00000589538 TP53BP1Q12888 1972 aaPredicted RBP16.57■□□□□ 0.24
DNMT1-221ENST00000589538 ASCC3Q8N3C0 2202 aaKnown RBP16.56■□□□□ 0.24
DNMT1-221ENST00000589538 CCDC66A2RUB6 948 aa16.56■□□□□ 0.24
DNMT1-221ENST00000589538 CFAP69A5D8W1 941 aa16.56■□□□□ 0.24
DNMT1-221ENST00000589538 IGLON5A6NGN9 336 aa16.56■□□□□ 0.24
DNMT1-221ENST00000589538 HTRA2O43464 458 aaPredicted RBP16.56■□□□□ 0.24
DNMT1-221ENST00000589538 NRDCO43847 1150 aa16.56■□□□□ 0.24
DNMT1-221ENST00000589538 TM7SF2O76062 418 aa16.56■□□□□ 0.24
DNMT1-221ENST00000589538 PAK4O96013 591 aaPredicted RBP16.56■□□□□ 0.24
DNMT1-221ENST00000589538 WNT1P04628 370 aa16.56■□□□□ 0.24
DNMT1-221ENST00000589538 CD59P13987 128 aa16.56■□□□□ 0.24
DNMT1-221ENST00000589538 CCNB1P14635 433 aa16.56■□□□□ 0.24
DNMT1-221ENST00000589538 PRLRP16471 622 aa16.56■□□□□ 0.24
DNMT1-221ENST00000589538 CDKN2BP42772 138 aa16.56■□□□□ 0.24
DNMT1-221ENST00000589538 ARRB1P49407 418 aaPredicted RBP16.56■□□□□ 0.24
DNMT1-221ENST00000589538 NXPH1P58417 271 aa16.56■□□□□ 0.24
DNMT1-221ENST00000589538 COPS2P61201 443 aa16.56■□□□□ 0.24
DNMT1-221ENST00000589538 PPIDQ08752 370 aaKnown RBP16.56■□□□□ 0.24
DNMT1-221ENST00000589538 INAVAQ3KP66 663 aa16.56■□□□□ 0.24
DNMT1-221ENST00000589538 PPM1JQ5JR12 505 aa16.56■□□□□ 0.24
DNMT1-221ENST00000589538 LAYNQ6UX15 382 aa16.56■□□□□ 0.24
DNMT1-221ENST00000589538 SPOCD1Q6ZMY3 1216 aa16.56■□□□□ 0.24
DNMT1-221ENST00000589538 PIP4P1Q86T03 277 aa16.56■□□□□ 0.24
DNMT1-221ENST00000589538 CCDC13Q8IYE1 715 aa16.56■□□□□ 0.24
DNMT1-221ENST00000589538 SYCE1Q8N0S2 351 aa16.56■□□□□ 0.24
DNMT1-221ENST00000589538 PGBD5Q8N414 524 aa16.56■□□□□ 0.24
DNMT1-221ENST00000589538 OR2I1PQ8NGU4 316 aa16.56■□□□□ 0.24
DNMT1-221ENST00000589538 EXD1Q8NHP7 514 aa16.56■□□□□ 0.24
DNMT1-221ENST00000589538 KLK6Q92876 244 aa16.56■□□□□ 0.24
DNMT1-221ENST00000589538 LACRTQ9GZZ8 138 aa16.56■□□□□ 0.24
DNMT1-221ENST00000589538 NT5MQ9NPB1 228 aa16.56■□□□□ 0.24
DNMT1-221ENST00000589538 PCDH12Q9NPG4 1184 aa16.56■□□□□ 0.24
DNMT1-221ENST00000589538 ITM2BQ9Y287 266 aa16.56■□□□□ 0.24
DNMT1-221ENST00000589538 DCHS1Q96JQ0 3298 aa16.55■□□□□ 0.24
DNMT1-221ENST00000589538 DOCK9Q9BZ29 2069 aa16.55■□□□□ 0.24
DNMT1-221ENST00000589538 TMEM131Q92545 1883 aa16.55■□□□□ 0.24
DNMT1-221ENST00000589538 A6NNZ2 444 aa16.55■□□□□ 0.24
DNMT1-221ENST00000589538 TRAFD1O14545 582 aaPredicted RBP16.55■□□□□ 0.24
DNMT1-221ENST00000589538 TOR1BO14657 336 aa16.55■□□□□ 0.24
DNMT1-221ENST00000589538 RIOK3O14730 519 aaKnown RBP16.55■□□□□ 0.24
DNMT1-221ENST00000589538 FPGTO14772 594 aa16.55■□□□□ 0.24
DNMT1-221ENST00000589538 WNT9AO14904 365 aa16.55■□□□□ 0.24
DNMT1-221ENST00000589538 FLRT2O43155 660 aa16.55■□□□□ 0.24
DNMT1-221ENST00000589538 SPINT1O43278 529 aa16.55■□□□□ 0.24
DNMT1-221ENST00000589538 PCDHGA12O60330 932 aa16.55■□□□□ 0.24
DNMT1-221ENST00000589538 KCNK5O95279 499 aa16.55■□□□□ 0.24
DNMT1-221ENST00000589538 MAP3K6O95382 1288 aa16.55■□□□□ 0.24
DNMT1-221ENST00000589538 KRT10P13645 584 aa16.55■□□□□ 0.24
DNMT1-221ENST00000589538 TGM2P21980 687 aa16.55■□□□□ 0.24
DNMT1-221ENST00000589538 CA4P22748 312 aa16.55■□□□□ 0.24
DNMT1-221ENST00000589538 CTNNA1P35221 906 aaKnown RBP16.55■□□□□ 0.24
DNMT1-221ENST00000589538 CETN2P41208 172 aa16.55■□□□□ 0.24
DNMT1-221ENST00000589538 NOVA1P51513 510 aaKnown RBP16.55■□□□□ 0.24
DNMT1-221ENST00000589538 ITKQ08881 620 aa16.55■□□□□ 0.24
DNMT1-221ENST00000589538 SLC10A2Q12908 348 aaPredicted RBP16.55■□□□□ 0.24
DNMT1-221ENST00000589538 PPP2R5EQ16537 467 aa16.55■□□□□ 0.24
DNMT1-221ENST00000589538 ALG1LQ6GMV1 187 aa16.55■□□□□ 0.24
DNMT1-221ENST00000589538 ABI3BPQ7Z7G0 1075 aa16.55■□□□□ 0.24
DNMT1-221ENST00000589538 NDUFAF2Q8N183 169 aa16.55■□□□□ 0.24
DNMT1-221ENST00000589538 UBE2Q2Q8WVN8 375 aa16.55■□□□□ 0.24
DNMT1-221ENST00000589538 ELF4Q99607 663 aaPredicted RBP16.55■□□□□ 0.24
DNMT1-221ENST00000589538 TSGA10Q9BZW7 698 aa16.55■□□□□ 0.24
DNMT1-221ENST00000589538 GOLPH3Q9H4A6 298 aa16.55■□□□□ 0.24
DNMT1-221ENST00000589538 NOD2Q9HC29 1040 aa16.55■□□□□ 0.24
DNMT1-221ENST00000589538 RBM22Q9NW64 420 aaKnown RBP eCLIP16.55■□□□□ 0.24
DNMT1-221ENST00000589538 FNDC3AQ9Y2H6 1198 aaKnown RBP16.55■□□□□ 0.24
DNMT1-221ENST00000589538 PCDHA3Q9Y5H8 950 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms