RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 RAB7BQ96AH8 199 aa15.26■□□□□ 0.03
SF3A2-204ENST00000589118 PDXPQ96GD0 296 aa15.26■□□□□ 0.03
SF3A2-204ENST00000589118 TMEM74Q96NL1 305 aa15.26■□□□□ 0.03
SF3A2-204ENST00000589118 KLC2Q9H0B6 622 aa15.26■□□□□ 0.03
SF3A2-204ENST00000589118 RDH14Q9HBH5 336 aa15.26■□□□□ 0.03
SF3A2-204ENST00000589118 MRPL40Q9NQ50 206 aaKnown RBP15.26■□□□□ 0.03
SF3A2-204ENST00000589118 GEMIN8Q9NWZ8 242 aaKnown RBP15.26■□□□□ 0.03
SF3A2-204ENST00000589118 NBPF19A0A087WUL8 3843 aa15.25■□□□□ 0.03
SF3A2-204ENST00000589118 ARHGEF17Q96PE2 2063 aaPredicted RBP15.25■□□□□ 0.03
SF3A2-204ENST00000589118 FOXN3O00409 490 aaPredicted RBP15.25■□□□□ 0.03
SF3A2-204ENST00000589118 KRT9P35527 623 aa15.25■□□□□ 0.03
SF3A2-204ENST00000589118 ARSDP51689 593 aa15.25■□□□□ 0.03
SF3A2-204ENST00000589118 SRP54P61011 504 aaKnown RBP15.25■□□□□ 0.03
SF3A2-204ENST00000589118 MTA1Q13330 715 aa15.25■□□□□ 0.03
SF3A2-204ENST00000589118 ELOCQ15369 112 aa15.25■□□□□ 0.03
SF3A2-204ENST00000589118 SLC25A52Q3SY17 297 aa15.25■□□□□ 0.03
SF3A2-204ENST00000589118 FAM102AQ5T9C2 384 aaPredicted RBP15.25■□□□□ 0.03
SF3A2-204ENST00000589118 XKR5Q6UX68 686 aa15.25■□□□□ 0.03
SF3A2-204ENST00000589118 FSTL5Q8N475 847 aaPredicted RBP15.25■□□□□ 0.03
SF3A2-204ENST00000589118 EMC1Q8N766 993 aa15.25■□□□□ 0.03
SF3A2-204ENST00000589118 PLA2G15Q8NCC3 412 aa15.25■□□□□ 0.03
SF3A2-204ENST00000589118 RCBTB1Q8NDN9 531 aa15.25■□□□□ 0.03
SF3A2-204ENST00000589118 GPR156Q8NFN8 814 aa15.25■□□□□ 0.03
SF3A2-204ENST00000589118 SCG3Q8WXD2 468 aaKnown RBP15.25■□□□□ 0.03
SF3A2-204ENST00000589118 SHC3Q92529 594 aa15.25■□□□□ 0.03
SF3A2-204ENST00000589118 ARHGEF2Q92974 986 aaKnown RBP15.25■□□□□ 0.03
SF3A2-204ENST00000589118 PGAP3Q96FM1 320 aaPredicted RBP15.25■□□□□ 0.03
SF3A2-204ENST00000589118 CCDC34Q96HJ3 373 aa15.25■□□□□ 0.03
SF3A2-204ENST00000589118 TBATAQ96M53 351 aa15.25■□□□□ 0.03
SF3A2-204ENST00000589118 APOOQ9BUR5 198 aa15.25■□□□□ 0.03
SF3A2-204ENST00000589118 SLC12A9Q9BXP2 914 aa15.25■□□□□ 0.03
SF3A2-204ENST00000589118 SEPT10Q9P0V9 454 aa15.25■□□□□ 0.03
SF3A2-204ENST00000589118 STAP1Q9ULZ2 295 aa15.25■□□□□ 0.03
SF3A2-204ENST00000589118 TEX15Q9BXT5 2789 aa15.24■□□□□ 0.03
SF3A2-204ENST00000589118 B4DGG1 531 aa15.24■□□□□ 0.03
SF3A2-204ENST00000589118 B4GAT1O43505 415 aa15.24■□□□□ 0.03
SF3A2-204ENST00000589118 RASGRP1O95267 797 aa15.24■□□□□ 0.03
SF3A2-204ENST00000589118 PIGNO95427 931 aa15.24■□□□□ 0.03
SF3A2-204ENST00000589118 POP4O95707 220 aaKnown RBP15.24■□□□□ 0.03
SF3A2-204ENST00000589118 PCCBP05166 539 aa15.24■□□□□ 0.03
SF3A2-204ENST00000589118 ALPIP09923 528 aa15.24■□□□□ 0.03
SF3A2-204ENST00000589118 ATP11AP98196 1134 aa15.24■□□□□ 0.03
SF3A2-204ENST00000589118 LRRC14Q15048 493 aa15.24■□□□□ 0.03
SF3A2-204ENST00000589118 RWDD4Q6NW29 188 aaKnown RBP15.24■□□□□ 0.03
SF3A2-204ENST00000589118 FOXR2Q6PJQ5 311 aa15.24■□□□□ 0.03
SF3A2-204ENST00000589118 ZNF783Q6ZMS7 281 aa15.24■□□□□ 0.03
SF3A2-204ENST00000589118 GKN2Q86XP6 184 aa15.24■□□□□ 0.03
SF3A2-204ENST00000589118 XYLT1Q86Y38 959 aa15.24■□□□□ 0.03
SF3A2-204ENST00000589118 ZSCAN1Q8NBB4 408 aa15.24■□□□□ 0.03
SF3A2-204ENST00000589118 FAM46DQ8NEK8 389 aa15.24■□□□□ 0.03
SF3A2-204ENST00000589118 OR1E3Q8WZA6 343 aa15.24■□□□□ 0.03
SF3A2-204ENST00000589118 ISG20Q96AZ6 181 aaKnown RBP15.24■□□□□ 0.03
SF3A2-204ENST00000589118 EXOC2Q96KP1 924 aa15.24■□□□□ 0.03
SF3A2-204ENST00000589118 SIX2Q9NPC8 291 aa15.24■□□□□ 0.03
SF3A2-204ENST00000589118 LRIT1Q9P2V4 623 aa15.24■□□□□ 0.03
SF3A2-204ENST00000589118 KLQ9UEF7 1012 aa15.24■□□□□ 0.03
SF3A2-204ENST00000589118 PCDHB11Q9Y5F2 797 aa15.24■□□□□ 0.03
SF3A2-204ENST00000589118 NBASA2RRP1 2371 aa15.24■□□□□ 0.03
SF3A2-204ENST00000589118 TMEM202A6NGA9 273 aa15.23■□□□□ 0.03
SF3A2-204ENST00000589118 TMX2-CTNND1H3BSU7 103 aa15.23■□□□□ 0.03
SF3A2-204ENST00000589118 RIOK3O14730 519 aaKnown RBP15.23■□□□□ 0.03
SF3A2-204ENST00000589118 GSRP00390 522 aa15.23■□□□□ 0.03
SF3A2-204ENST00000589118 F9P00740 461 aa15.23■□□□□ 0.03
SF3A2-204ENST00000589118 MARSP56192 900 aaKnown RBP15.23■□□□□ 0.03
SF3A2-204ENST00000589118 OR1D5P58170 312 aa15.23■□□□□ 0.03
SF3A2-204ENST00000589118 SNRPD1P62314 119 aaKnown RBP15.23■□□□□ 0.03
SF3A2-204ENST00000589118 PTK2Q05397 1052 aa15.23■□□□□ 0.03
SF3A2-204ENST00000589118 NFATC4Q14934 902 aa15.23■□□□□ 0.03
SF3A2-204ENST00000589118 POLD3Q15054 466 aaPredicted RBP15.23■□□□□ 0.03
SF3A2-204ENST00000589118 CDO1Q16878 200 aa15.23■□□□□ 0.03
SF3A2-204ENST00000589118 AMZ1Q400G9 498 aa15.23■□□□□ 0.03
SF3A2-204ENST00000589118 TAF3Q5VWG9 929 aa15.23■□□□□ 0.03
SF3A2-204ENST00000589118 LVRNQ6Q4G3 990 aa15.23■□□□□ 0.03
SF3A2-204ENST00000589118 ENOSF1Q7L5Y1 443 aa15.23■□□□□ 0.03
SF3A2-204ENST00000589118 SPRED1Q7Z699 444 aa15.23■□□□□ 0.03
SF3A2-204ENST00000589118 TAF8Q7Z7C8 310 aa15.23■□□□□ 0.03
SF3A2-204ENST00000589118 SLITRK4Q8IW52 837 aa15.23■□□□□ 0.03
SF3A2-204ENST00000589118 HAPLN3Q96S86 360 aa15.23■□□□□ 0.03
SF3A2-204ENST00000589118 TMEM168Q9H0V1 697 aa15.23■□□□□ 0.03
SF3A2-204ENST00000589118 SUDS3Q9H7L9 328 aaPredicted RBP15.23■□□□□ 0.03
SF3A2-204ENST00000589118 ZNF71Q9NQZ8 489 aaPredicted RBP15.23■□□□□ 0.03
SF3A2-204ENST00000589118 RRN3Q9NYV6 651 aa15.23■□□□□ 0.03
SF3A2-204ENST00000589118 APEX2Q9UBZ4 518 aa15.23■□□□□ 0.03
SF3A2-204ENST00000589118 DNAJC12Q9UKB3 198 aa15.23■□□□□ 0.03
SF3A2-204ENST00000589118 BUB1O43683 1085 aa15.22■□□□□ 0.03
SF3A2-204ENST00000589118 TMCC1O94876 653 aa15.22■□□□□ 0.03
SF3A2-204ENST00000589118 TNFP01375 233 aa15.22■□□□□ 0.03
SF3A2-204ENST00000589118 SFTPCP11686 197 aa15.22■□□□□ 0.03
SF3A2-204ENST00000589118 GP1BBP13224 206 aa15.22■□□□□ 0.03
SF3A2-204ENST00000589118 CR2P20023 1033 aa15.22■□□□□ 0.03
SF3A2-204ENST00000589118 MPSTP25325 297 aa15.22■□□□□ 0.03
SF3A2-204ENST00000589118 PON1P27169 355 aa15.22■□□□□ 0.03
SF3A2-204ENST00000589118 BLKP51451 505 aa15.22■□□□□ 0.03
SF3A2-204ENST00000589118 MAZP56270 477 aaKnown RBP15.22■□□□□ 0.03
SF3A2-204ENST00000589118 B4GALNT1Q00973 533 aa15.22■□□□□ 0.03
SF3A2-204ENST00000589118 C15orf59Q2T9L4 293 aaPredicted RBP15.22■□□□□ 0.03
SF3A2-204ENST00000589118 TMEM52BQ4KMG9 183 aa15.22■□□□□ 0.03
SF3A2-204ENST00000589118 CERCAMQ5T4B2 595 aa15.22■□□□□ 0.03
SF3A2-204ENST00000589118 OGFOD3Q6PK18 319 aa15.22■□□□□ 0.03
SF3A2-204ENST00000589118 BNIPLQ7Z465 357 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms