RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 TADA1Q96BN2 335 aa19.13■□□□□ 0.65
CLPTM1-209ENST00000588855 OXNAD1Q96HP4 312 aaPredicted RBP19.13■□□□□ 0.65
CLPTM1-209ENST00000588855 FCRL5Q96RD9 977 aa19.13■□□□□ 0.65
CLPTM1-209ENST00000588855 GORASP1Q9BQQ3 440 aa19.13■□□□□ 0.65
CLPTM1-209ENST00000588855 FAM86C1Q9NVL1 165 aa19.13■□□□□ 0.65
CLPTM1-209ENST00000588855 UBP1Q9NZI7 540 aa19.13■□□□□ 0.65
CLPTM1-209ENST00000588855 PCDHB9Q9Y5E1 797 aa19.13■□□□□ 0.65
CLPTM1-209ENST00000588855 FRYLO94915 3013 aa19.13■□□□□ 0.65
CLPTM1-209ENST00000588855 TNRC6BQ9UPQ9 1833 aaKnown RBP19.12■□□□□ 0.65
CLPTM1-209ENST00000588855 FAM47DPA6NHR8 397 aa19.12■□□□□ 0.65
CLPTM1-209ENST00000588855 UPK3BL1B0FP48 263 aa19.12■□□□□ 0.65
CLPTM1-209ENST00000588855 UPK3BL2E5RIL1 263 aa19.12■□□□□ 0.65
CLPTM1-209ENST00000588855 SPINT1O43278 529 aa19.12■□□□□ 0.65
CLPTM1-209ENST00000588855 MAP3K13O43283 966 aa19.12■□□□□ 0.65
CLPTM1-209ENST00000588855 FZD6O60353 706 aa19.12■□□□□ 0.65
CLPTM1-209ENST00000588855 PHF2O75151 1096 aa19.12■□□□□ 0.65
CLPTM1-209ENST00000588855 NDUFS2O75306 463 aa19.12■□□□□ 0.65
CLPTM1-209ENST00000588855 GCATO75600 419 aa19.12■□□□□ 0.65
CLPTM1-209ENST00000588855 PGLSO95336 258 aa19.12■□□□□ 0.65
CLPTM1-209ENST00000588855 CPP00450 1065 aa19.12■□□□□ 0.65
CLPTM1-209ENST00000588855 PRKCGP05129 697 aa19.12■□□□□ 0.65
CLPTM1-209ENST00000588855 PDHA1P08559 390 aa19.12■□□□□ 0.65
CLPTM1-209ENST00000588855 ETS1P14921 441 aa19.12■□□□□ 0.65
CLPTM1-209ENST00000588855 ITIH2P19823 946 aa19.12■□□□□ 0.65
CLPTM1-209ENST00000588855 STIP1P31948 543 aaKnown RBP19.12■□□□□ 0.65
CLPTM1-209ENST00000588855 RPL6Q02878 288 aaKnown RBP19.12■□□□□ 0.65
CLPTM1-209ENST00000588855 KCTD19Q17RG1 926 aaPredicted RBP19.12■□□□□ 0.65
CLPTM1-209ENST00000588855 ARMC12Q5T9G4 340 aa19.12■□□□□ 0.65
CLPTM1-209ENST00000588855 ARHGEF18Q6ZSZ5 1173 aa19.12■□□□□ 0.65
CLPTM1-209ENST00000588855 TTC7BQ86TV6 843 aa19.12■□□□□ 0.65
CLPTM1-209ENST00000588855 HCAR2Q8TDS4 363 aa19.12■□□□□ 0.65
CLPTM1-209ENST00000588855 ATOH1Q92858 354 aaPredicted RBP19.12■□□□□ 0.65
CLPTM1-209ENST00000588855 RAPGEFL1Q9UHV5 662 aa19.12■□□□□ 0.65
CLPTM1-209ENST00000588855 GGT7Q9UJ14 662 aa19.12■□□□□ 0.65
CLPTM1-209ENST00000588855 CHKBQ9Y259 395 aa19.12■□□□□ 0.65
CLPTM1-209ENST00000588855 ITM2BQ9Y287 266 aa19.12■□□□□ 0.65
CLPTM1-209ENST00000588855 DOCK9Q9BZ29 2069 aa19.12■□□□□ 0.65
CLPTM1-209ENST00000588855 LRRK1Q38SD2 2015 aa19.11■□□□□ 0.65
CLPTM1-209ENST00000588855 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.11■□□□□ 0.65
CLPTM1-209ENST00000588855 PRR23AA6NEV1 266 aa19.11■□□□□ 0.65
CLPTM1-209ENST00000588855 KIF2AO00139 706 aaPredicted RBP19.11■□□□□ 0.65
CLPTM1-209ENST00000588855 PMPCBO75439 489 aa19.11■□□□□ 0.65
CLPTM1-209ENST00000588855 DEKP35659 375 aaKnown RBP19.11■□□□□ 0.65
CLPTM1-209ENST00000588855 COILP38432 576 aaPredicted RBP19.11■□□□□ 0.65
CLPTM1-209ENST00000588855 PAFAH1B1P43034 410 aa19.11■□□□□ 0.65
CLPTM1-209ENST00000588855 CCDC15Q0P6D6 951 aa19.11■□□□□ 0.65
CLPTM1-209ENST00000588855 SIM2Q14190 667 aaPredicted RBP19.11■□□□□ 0.65
CLPTM1-209ENST00000588855 PCSK7Q16549 785 aa19.11■□□□□ 0.65
CLPTM1-209ENST00000588855 UGP2Q16851 508 aa19.11■□□□□ 0.65
CLPTM1-209ENST00000588855 P3H1Q32P28 736 aa19.11■□□□□ 0.65
CLPTM1-209ENST00000588855 PLK5Q496M5 336 aa19.11■□□□□ 0.65
CLPTM1-209ENST00000588855 KDELC1Q6UW63 502 aa19.11■□□□□ 0.65
CLPTM1-209ENST00000588855 C11orf74Q86VG3 221 aa19.11■□□□□ 0.65
CLPTM1-209ENST00000588855 TMEFF1Q8IYR6 380 aa19.11■□□□□ 0.65
CLPTM1-209ENST00000588855 TAB3Q8N5C8 712 aaPredicted RBP19.11■□□□□ 0.65
CLPTM1-209ENST00000588855 DEFB119Q8N690 84 aa19.11■□□□□ 0.65
CLPTM1-209ENST00000588855 SPOCK2Q92563 424 aa19.11■□□□□ 0.65
CLPTM1-209ENST00000588855 DUSP15Q9H1R2 295 aaPredicted RBP19.11■□□□□ 0.65
CLPTM1-209ENST00000588855 C6orf106Q9H6K1 298 aaPredicted RBP19.11■□□□□ 0.65
CLPTM1-209ENST00000588855 RNF14Q9UBS8 474 aa19.11■□□□□ 0.65
CLPTM1-209ENST00000588855 FAM153AQ9UHL3 310 aa19.11■□□□□ 0.65
CLPTM1-209ENST00000588855 FADS3Q9Y5Q0 445 aa19.11■□□□□ 0.65
CLPTM1-209ENST00000588855 SDK1Q7Z5N4 2213 aa19.11■□□□□ 0.65
CLPTM1-209ENST00000588855 METTL18O95568 372 aa19.1■□□□□ 0.65
CLPTM1-209ENST00000588855 PRLP01236 227 aa19.1■□□□□ 0.65
CLPTM1-209ENST00000588855 TUBB4AP04350 444 aa19.1■□□□□ 0.65
CLPTM1-209ENST00000588855 ZSCAN5DPP0CG00 497 aa19.1■□□□□ 0.65
CLPTM1-209ENST00000588855 CA4P22748 312 aa19.1■□□□□ 0.65
CLPTM1-209ENST00000588855 XPAP23025 273 aaPredicted RBP19.1■□□□□ 0.65
CLPTM1-209ENST00000588855 SLC14A2Q15849 920 aa19.1■□□□□ 0.65
CLPTM1-209ENST00000588855 FAXCQ5TGI0 409 aa19.1■□□□□ 0.65
CLPTM1-209ENST00000588855 PMS2CLQ68D20 193 aa19.1■□□□□ 0.65
CLPTM1-209ENST00000588855 CCDC137Q6PK04 289 aaKnown RBP19.1■□□□□ 0.65
CLPTM1-209ENST00000588855 PRR23BQ6ZRT6 265 aa19.1■□□□□ 0.65
CLPTM1-209ENST00000588855 GSTA5Q7RTV2 222 aa19.1■□□□□ 0.65
CLPTM1-209ENST00000588855 CCDC89Q8N998 374 aa19.1■□□□□ 0.65
CLPTM1-209ENST00000588855 OR2T34Q8NGX1 318 aa19.1■□□□□ 0.65
CLPTM1-209ENST00000588855 RAB7BQ96AH8 199 aa19.1■□□□□ 0.65
CLPTM1-209ENST00000588855 MLPHQ9BV36 600 aaPredicted RBP19.1■□□□□ 0.65
CLPTM1-209ENST00000588855 DDX47Q9H0S4 455 aaKnown RBP19.1■□□□□ 0.65
CLPTM1-209ENST00000588855 IRF2BPLQ9H1B7 796 aa19.1■□□□□ 0.65
CLPTM1-209ENST00000588855 PCDH9Q9HC56 1237 aa19.1■□□□□ 0.65
CLPTM1-209ENST00000588855 PCDH12Q9NPG4 1184 aa19.1■□□□□ 0.65
CLPTM1-209ENST00000588855 A0A1W2PQ67 120 aa19.1■□□□□ 0.65
CLPTM1-209ENST00000588855 LRRC72A6NJI9 287 aa19.1■□□□□ 0.65
CLPTM1-209ENST00000588855 AREL1O15033 823 aa19.1■□□□□ 0.65
CLPTM1-209ENST00000588855 AP1G1O43747 822 aa19.1■□□□□ 0.65
CLPTM1-209ENST00000588855 PPP2CBP62714 309 aa19.1■□□□□ 0.65
CLPTM1-209ENST00000588855 PPP2CAP67775 309 aa19.1■□□□□ 0.65
CLPTM1-209ENST00000588855 SEMG2Q02383 582 aa19.1■□□□□ 0.65
CLPTM1-209ENST00000588855 LPAL2Q16609 132 aa19.1■□□□□ 0.65
CLPTM1-209ENST00000588855 KDELC2Q7Z4H8 507 aa19.1■□□□□ 0.65
CLPTM1-209ENST00000588855 LPCAT1Q8NF37 534 aa19.1■□□□□ 0.65
CLPTM1-209ENST00000588855 ATL2Q8NHH9 583 aa19.1■□□□□ 0.65
CLPTM1-209ENST00000588855 PIH1D2Q8WWB5 315 aa19.1■□□□□ 0.65
CLPTM1-209ENST00000588855 SMIM14Q96QK8 99 aa19.1■□□□□ 0.65
CLPTM1-209ENST00000588855 TRIB3Q96RU7 358 aa19.1■□□□□ 0.65
CLPTM1-209ENST00000588855 EPC1Q9H2F5 836 aa19.1■□□□□ 0.65
CLPTM1-209ENST00000588855 KDM4CQ9H3R0 1056 aa19.1■□□□□ 0.65
CLPTM1-209ENST00000588855 VPS45Q9NRW7 570 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms