RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 SF3A2Q15428 464 aaKnown RBP21.63■■□□□ 1.05
RETREG3-204ENST00000586796 UGP2Q16851 508 aa21.63■■□□□ 1.05
RETREG3-204ENST00000586796 SEL1L3Q68CR1 1132 aa21.63■■□□□ 1.05
RETREG3-204ENST00000586796 TCEAL6Q6IPX3 200 aa21.63■■□□□ 1.05
RETREG3-204ENST00000586796 PRPF39Q86UA1 669 aaKnown RBP21.63■■□□□ 1.05
RETREG3-204ENST00000586796 SLC13A5Q86YT5 568 aaPredicted RBP21.63■■□□□ 1.05
RETREG3-204ENST00000586796 CDKL3Q8IVW4 592 aaPredicted RBP21.63■■□□□ 1.05
RETREG3-204ENST00000586796 TTC13Q8NBP0 860 aa21.63■■□□□ 1.05
RETREG3-204ENST00000586796 ARRDC2Q8TBH0 407 aa21.63■■□□□ 1.05
RETREG3-204ENST00000586796 HCAR2Q8TDS4 363 aa21.63■■□□□ 1.05
RETREG3-204ENST00000586796 DNASE2BQ8WZ79 361 aa21.63■■□□□ 1.05
RETREG3-204ENST00000586796 TCEAL3Q969E4 200 aa21.63■■□□□ 1.05
RETREG3-204ENST00000586796 FEM1CQ96JP0 617 aa21.63■■□□□ 1.05
RETREG3-204ENST00000586796 EBF2Q9HAK2 575 aa21.63■■□□□ 1.05
RETREG3-204ENST00000586796 VPS45Q9NRW7 570 aa21.63■■□□□ 1.05
RETREG3-204ENST00000586796 KLHL8Q9P2G9 620 aaPredicted RBP21.63■■□□□ 1.05
RETREG3-204ENST00000586796 JRKLQ9Y4A0 524 aa21.63■■□□□ 1.05
RETREG3-204ENST00000586796 PCDHB9Q9Y5E1 797 aa21.63■■□□□ 1.05
RETREG3-204ENST00000586796 RAI2Q9Y5P3 530 aa21.63■■□□□ 1.05
RETREG3-204ENST00000586796 SLCO1B1Q9Y6L6 691 aa21.63■■□□□ 1.05
RETREG3-204ENST00000586796 TSPAN11A1L157 253 aa21.62■■□□□ 1.05
RETREG3-204ENST00000586796 F5H423 210 aaPredicted RBP21.62■■□□□ 1.05
RETREG3-204ENST00000586796 MTSS1O43312 755 aa21.62■■□□□ 1.05
RETREG3-204ENST00000586796 AP1G1O43747 822 aa21.62■■□□□ 1.05
RETREG3-204ENST00000586796 CEP104O60308 925 aa21.62■■□□□ 1.05
RETREG3-204ENST00000586796 SOCS5O75159 536 aa21.62■■□□□ 1.05
RETREG3-204ENST00000586796 SERPINF2P08697 491 aa21.62■■□□□ 1.05
RETREG3-204ENST00000586796 GNSP15586 552 aa21.62■■□□□ 1.05
RETREG3-204ENST00000586796 MSNP26038 577 aaKnown RBP21.62■■□□□ 1.05
RETREG3-204ENST00000586796 CD27P26842 260 aa21.62■■□□□ 1.05
RETREG3-204ENST00000586796 DPP6P42658 865 aa21.62■■□□□ 1.05
RETREG3-204ENST00000586796 FAM193AP78312 1265 aa21.62■■□□□ 1.05
RETREG3-204ENST00000586796 IHHQ14623 411 aa21.62■■□□□ 1.05
RETREG3-204ENST00000586796 PLA2G2CQ5R387 149 aa21.62■■□□□ 1.05
RETREG3-204ENST00000586796 ARMC12Q5T9G4 340 aa21.62■■□□□ 1.05
RETREG3-204ENST00000586796 NEK5Q6P3R8 708 aa21.62■■□□□ 1.05
RETREG3-204ENST00000586796 PID1Q7Z2X4 250 aa21.62■■□□□ 1.05
RETREG3-204ENST00000586796 TRIM69Q86WT6 500 aa21.62■■□□□ 1.05
RETREG3-204ENST00000586796 HORMAD1Q86X24 394 aa21.62■■□□□ 1.05
RETREG3-204ENST00000586796 ECHDC3Q96DC8 303 aa21.62■■□□□ 1.05
RETREG3-204ENST00000586796 TEKT5Q96M29 485 aa21.62■■□□□ 1.05
RETREG3-204ENST00000586796 FERMT1Q9BQL6 677 aa21.62■■□□□ 1.05
RETREG3-204ENST00000586796 WRAP53Q9BUR4 548 aaKnown RBP21.62■■□□□ 1.05
RETREG3-204ENST00000586796 PCDH12Q9NPG4 1184 aa21.62■■□□□ 1.05
RETREG3-204ENST00000586796 FSCN3Q9NQT6 498 aa21.62■■□□□ 1.05
RETREG3-204ENST00000586796 ZFR2Q9UPR6 939 aaKnown RBP21.62■■□□□ 1.05
RETREG3-204ENST00000586796 USP34Q70CQ2 3546 aa21.62■■□□□ 1.05
RETREG3-204ENST00000586796 SDK1Q7Z5N4 2213 aa21.61■■□□□ 1.05
RETREG3-204ENST00000586796 A0A1W2PPC4 97 aa21.61■■□□□ 1.05
RETREG3-204ENST00000586796 A8MX80 341 aa21.61■■□□□ 1.05
RETREG3-204ENST00000586796 AREL1O15033 823 aa21.61■■□□□ 1.05
RETREG3-204ENST00000586796 SLC31A1O15431 190 aa21.61■■□□□ 1.05
RETREG3-204ENST00000586796 KCNN4O15554 427 aa21.61■■□□□ 1.05
RETREG3-204ENST00000586796 SPINT1O43278 529 aa21.61■■□□□ 1.05
RETREG3-204ENST00000586796 HTRA2O43464 458 aaPredicted RBP21.61■■□□□ 1.05
RETREG3-204ENST00000586796 TSPAN6O43657 245 aa21.61■■□□□ 1.05
RETREG3-204ENST00000586796 CPP00450 1065 aa21.61■■□□□ 1.05
RETREG3-204ENST00000586796 PRLRP16471 622 aa21.61■■□□□ 1.05
RETREG3-204ENST00000586796 POLR2LP62875 67 aaKnown RBP21.61■■□□□ 1.05
RETREG3-204ENST00000586796 DUOXA1Q1HG43 343 aa21.61■■□□□ 1.05
RETREG3-204ENST00000586796 TRIM61Q5EBN2 209 aa21.61■■□□□ 1.05
RETREG3-204ENST00000586796 ALG1LQ6GMV1 187 aa21.61■■□□□ 1.05
RETREG3-204ENST00000586796 ERAP2Q6P179 960 aa21.61■■□□□ 1.05
RETREG3-204ENST00000586796 KIAA2013Q8IYS2 634 aa21.61■■□□□ 1.05
RETREG3-204ENST00000586796 ZNF567Q8N184 647 aa21.61■■□□□ 1.05
RETREG3-204ENST00000586796 CXorf40AQ8TE69 158 aa21.61■■□□□ 1.05
RETREG3-204ENST00000586796 ATG4AQ8WYN0 398 aa21.61■■□□□ 1.05
RETREG3-204ENST00000586796 RBM15Q96T37 977 aaKnown RBP eCLIP21.61■■□□□ 1.05
RETREG3-204ENST00000586796 MYOCQ99972 504 aa21.61■■□□□ 1.05
RETREG3-204ENST00000586796 GLOD4Q9HC38 313 aa21.61■■□□□ 1.05
RETREG3-204ENST00000586796 SUSD2Q9UGT4 822 aa21.61■■□□□ 1.05
RETREG3-204ENST00000586796 CHKBQ9Y259 395 aa21.61■■□□□ 1.05
RETREG3-204ENST00000586796 SPAG17Q6Q759 2223 aa21.61■■□□□ 1.05
RETREG3-204ENST00000586796 IGLON5A6NGN9 336 aa21.6■■□□□ 1.05
RETREG3-204ENST00000586796 KHNYNO15037 678 aaKnown RBP21.6■■□□□ 1.05
RETREG3-204ENST00000586796 BCAT2O15382 392 aaPredicted RBP21.6■■□□□ 1.05
RETREG3-204ENST00000586796 MMP20O60882 483 aa21.6■■□□□ 1.05
RETREG3-204ENST00000586796 PGLSO95336 258 aa21.6■■□□□ 1.05
RETREG3-204ENST00000586796 ATP1A1P05023 1023 aaKnown RBP21.6■■□□□ 1.05
RETREG3-204ENST00000586796 MMP2P08253 660 aa21.6■■□□□ 1.05
RETREG3-204ENST00000586796 PDHA1P08559 390 aa21.6■■□□□ 1.05
RETREG3-204ENST00000586796 ZNF806P0C7X5 589 aa21.6■■□□□ 1.05
RETREG3-204ENST00000586796 RPS21P63220 83 aaKnown RBP21.6■■□□□ 1.05
RETREG3-204ENST00000586796 SKOR1P84550 965 aa21.6■■□□□ 1.05
RETREG3-204ENST00000586796 ELP6Q0PNE2 266 aa21.6■■□□□ 1.05
RETREG3-204ENST00000586796 CSRP2Q16527 193 aa21.6■■□□□ 1.05
RETREG3-204ENST00000586796 PEAR1Q5VY43 1037 aaPredicted RBP21.6■■□□□ 1.05
RETREG3-204ENST00000586796 KIAA1161Q6NSJ0 714 aa21.6■■□□□ 1.05
RETREG3-204ENST00000586796 C17orf53Q8N3J3 647 aaPredicted RBP21.6■■□□□ 1.05
RETREG3-204ENST00000586796 C12orf50Q8NA57 414 aaPredicted RBP21.6■■□□□ 1.05
RETREG3-204ENST00000586796 SPATA22Q8NHS9 363 aa21.6■■□□□ 1.05
RETREG3-204ENST00000586796 SERAC1Q96JX3 654 aa21.6■■□□□ 1.05
RETREG3-204ENST00000586796 SLC6A18Q96N87 628 aa21.6■■□□□ 1.05
RETREG3-204ENST00000586796 ORAI3Q9BRQ5 295 aa21.6■■□□□ 1.05
RETREG3-204ENST00000586796 SLC25A51Q9H1U9 297 aa21.6■■□□□ 1.05
RETREG3-204ENST00000586796 AASDHPPTQ9NRN7 309 aa21.6■■□□□ 1.05
RETREG3-204ENST00000586796 UBP1Q9NZI7 540 aa21.6■■□□□ 1.05
RETREG3-204ENST00000586796 A0A1B0GTW7 788 aa21.59■■□□□ 1.05
RETREG3-204ENST00000586796 RIOK3O14730 519 aaKnown RBP21.59■■□□□ 1.05
RETREG3-204ENST00000586796 LATO43561 262 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms