RNA–Protein interactions for RNA: ENST00000585460.1

PRKAR1A-206, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 2

Gene PRKAR1A, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-206	ENST00000585460	HCAR2	Q8TDS4	363 aa		16.54	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	KCNE4	Q8WWG9	221 aa		16.54	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	GLMN	Q92990	594 aa		16.54	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	C1QTNF7	Q9BXJ2	289 aa		16.54	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	DPH1	Q9BZG8	443 aa		16.54	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	LHX3	Q9UBR4	397 aa		16.54	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	FZD10	Q9ULW2	581 aa		16.54	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	PADI4	Q9UM07	663 aa		16.54	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	DAAM1	Q9Y4D1	1078 aa		16.54	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	MGA	Q8IWI9	3026 aa		16.54	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	BUB1B	O60566	1050 aa	Predicted RBP	16.53	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	RBMS1	P29558	406 aa	Known RBP	16.53	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	PEX5	P50542	639 aa		16.53	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	SUOX	P51687	545 aa		16.53	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	COPB1	P53618	953 aa	Known RBP	16.53	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	SKOR1	P84550	965 aa		16.53	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	IRF4	Q15306	451 aa		16.53	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	PARP15	Q460N3	678 aa		16.53	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	EFHC2	Q5JST6	749 aa		16.53	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	PPP1R15B	Q5SWA1	713 aa		16.53	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	NYAP1	Q6ZVC0	841 aa		16.53	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	TSACC	Q96A04	125 aa	Predicted RBP	16.53	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	AGPAT1	Q99943	283 aa		16.53	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	SUV39H2	Q9H5I1	410 aa		16.53	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	LMBRD1	Q9NUN5	540 aa		16.53	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	COQ6	Q9Y2Z9	468 aa		16.53	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	PCDHGA8	Q9Y5G5	932 aa		16.53	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	TDRD6	O60522	2096 aa	Known RBP	16.53	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	CFAP46	Q8IYW2	2715 aa		16.53	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	DOCK4	Q8N1I0	1966 aa		16.52	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	LRRC10B	A6NIK2	292 aa		16.52	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	TMEM110-MUSTN1	A8MSY1	372 aa		16.52	■□□□□ 0.24
PRKAR1A-206	ENST00000585460		J3KR12	359 aa		16.52	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	TCEA3	O75764	348 aa		16.52	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	PIGN	O95427	931 aa		16.52	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	TPM2	P07951	284 aa		16.52	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	UCN	P55089	124 aa		16.52	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	TMPRSS3	P57727	454 aa		16.52	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	LRRC14	Q15048	493 aa		16.52	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	UGP2	Q16851	508 aa		16.52	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	HID1	Q8IV36	788 aa		16.52	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	NEK11	Q8NG66	645 aa		16.52	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	NAT6	Q93015	286 aa		16.52	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	EXOC2	Q96KP1	924 aa		16.52	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	CCDC3	Q9BQI4	270 aa		16.52	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	CNPY3	Q9BT09	278 aa		16.52	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	LRRC19	Q9H756	370 aa		16.52	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	CATSPERB	Q9H7T0	1116 aa		16.52	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	PCDH12	Q9NPG4	1184 aa		16.52	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	GULP1	Q9UBP9	304 aa		16.52	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	LIMA1	Q9UHB6	759 aa	Known RBP	16.52	■□□□□ 0.24
PRKAR1A-206	ENST00000585460	CDRT15L2	A8MXV6	281 aa		16.51	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	ERVH48-1	M5A8F1	160 aa		16.51	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	NTN3	O00634	580 aa	Predicted RBP	16.51	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	XPA	P23025	273 aa	Predicted RBP	16.51	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	HK3	P52790	923 aa		16.51	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	RHD	Q02161	417 aa		16.51	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	OGDH	Q02218	1023 aa		16.51	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	CFHR1	Q03591	330 aa		16.51	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	ELP6	Q0PNE2	266 aa		16.51	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	INPP5A	Q14642	412 aa		16.51	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	ALG11	Q2TAA5	492 aa		16.51	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	ESRP1	Q6NXG1	681 aa	Known RBP	16.51	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	DNAJC24	Q6P3W2	148 aa		16.51	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	LVRN	Q6Q4G3	990 aa		16.51	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	ENPP7	Q6UWV6	458 aa		16.51	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	ZNF605	Q86T29	641 aa		16.51	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	CAMK1D	Q8IU85	385 aa		16.51	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	FSTL5	Q8N475	847 aa	Predicted RBP	16.51	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	SNRNP27	Q8WVK2	155 aa	Known RBP	16.51	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	WBP1	Q96G27	269 aa		16.51	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	PCMTD1	Q96MG8	357 aa	Predicted RBP	16.51	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	MCEE	Q96PE7	176 aa		16.51	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	APOO	Q9BUR5	198 aa		16.51	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	EDEM3	Q9BZQ6	932 aa		16.51	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	PDF	Q9HBH1	243 aa		16.51	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	SEPT11	Q9NVA2	429 aa	Known RBP	16.51	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	UBA2	Q9UBT2	640 aa	Predicted RBP	16.51	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	RABGEF1	Q9UJ41	708 aa		16.51	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	TSPAN11	A1L157	253 aa		16.5	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	LGALS16	A8MUM7	142 aa		16.5	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	TNFSF15	O95150	251 aa		16.5	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	C6	P13671	934 aa		16.5	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	LIG3	P49916	1009 aa		16.5	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	BLK	P51451	505 aa		16.5	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	PDX1	P52945	283 aa		16.5	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	AIF1	P55008	147 aa		16.5	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	VAC14	Q08AM6	782 aa		16.5	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	AGER	Q15109	404 aa		16.5	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	ELOC	Q15369	112 aa		16.5	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	TCEA2	Q15560	299 aa		16.5	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	TAF1B	Q53T94	588 aa	Predicted RBP	16.5	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	KCTD16	Q68DU8	428 aa		16.5	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	ACAD10	Q6JQN1	1059 aa		16.5	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	FOXR1	Q6PIV2	292 aa		16.5	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	RD3	Q7Z3Z2	195 aa		16.5	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	ZSWIM9	Q86XI8	627 aa		16.5	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	DNAAF5	Q86Y56	855 aa		16.5	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	MCOLN2	Q8IZK6	566 aa		16.5	■□□□□ 0.23
PRKAR1A-206	ENST00000585460	WDR36	Q8NI36	951 aa	Known RBP	16.5	■□□□□ 0.23

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms