RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 HLA-DQB2P05538 268 aa14□□□□□ -0.17
TRAF4-215ENST00000584944 CTSLP07711 333 aa14□□□□□ -0.17
TRAF4-215ENST00000584944 STIP1P31948 543 aaKnown RBP14□□□□□ -0.17
TRAF4-215ENST00000584944 CD86P42081 329 aa14□□□□□ -0.17
TRAF4-215ENST00000584944 DHPSP49366 369 aaPredicted RBP14□□□□□ -0.17
TRAF4-215ENST00000584944 SUOXP51687 545 aa14□□□□□ -0.17
TRAF4-215ENST00000584944 DSC2Q02487 901 aa14□□□□□ -0.17
TRAF4-215ENST00000584944 ZBTB17Q13105 803 aa14□□□□□ -0.17
TRAF4-215ENST00000584944 KLF1Q13351 362 aaPredicted RBP14□□□□□ -0.17
TRAF4-215ENST00000584944 ARMC12Q5T9G4 340 aa14□□□□□ -0.17
TRAF4-215ENST00000584944 SYT10Q6XYQ8 523 aa14□□□□□ -0.17
TRAF4-215ENST00000584944 FAM71DQ8N9W8 422 aa14□□□□□ -0.17
TRAF4-215ENST00000584944 RAB7BQ96AH8 199 aa14□□□□□ -0.17
TRAF4-215ENST00000584944 CAPZA3Q96KX2 299 aa14□□□□□ -0.17
TRAF4-215ENST00000584944 IL12RB2Q99665 862 aa14□□□□□ -0.17
TRAF4-215ENST00000584944 HERPUD2Q9BSE4 406 aa14□□□□□ -0.17
TRAF4-215ENST00000584944 GPR174Q9BXC1 333 aa14□□□□□ -0.17
TRAF4-215ENST00000584944 FSD1LQ9BXM9 530 aa14□□□□□ -0.17
TRAF4-215ENST00000584944 ADGRE3Q9BY15 652 aa14□□□□□ -0.17
TRAF4-215ENST00000584944 HDAC8Q9BY41 377 aa14□□□□□ -0.17
TRAF4-215ENST00000584944 NEUROG2Q9H2A3 272 aa14□□□□□ -0.17
TRAF4-215ENST00000584944 MUC22E2RYF6 1773 aaPredicted RBP14□□□□□ -0.17
TRAF4-215ENST00000584944 IGHV1OR15-9A0A0B4J2B8 117 aa13.99□□□□□ -0.17
TRAF4-215ENST00000584944 TTC24A2A3L6 582 aaPredicted RBP13.99□□□□□ -0.17
TRAF4-215ENST00000584944 E7EVH7 732 aa13.99□□□□□ -0.17
TRAF4-215ENST00000584944 MUSKO15146 869 aa13.99□□□□□ -0.17
TRAF4-215ENST00000584944 LIASO43766 372 aa13.99□□□□□ -0.17
TRAF4-215ENST00000584944 FOXD2O60548 495 aaPredicted RBP13.99□□□□□ -0.17
TRAF4-215ENST00000584944 OPHN1O60890 802 aa13.99□□□□□ -0.17
TRAF4-215ENST00000584944 ANXA9O76027 345 aa13.99□□□□□ -0.17
TRAF4-215ENST00000584944 FSBPO95073 299 aa13.99□□□□□ -0.17
TRAF4-215ENST00000584944 CPP00450 1065 aa13.99□□□□□ -0.17
TRAF4-215ENST00000584944 ADRB1P08588 477 aa13.99□□□□□ -0.17
TRAF4-215ENST00000584944 ADRB3P13945 408 aa13.99□□□□□ -0.17
TRAF4-215ENST00000584944 PRLRP16471 622 aa13.99□□□□□ -0.17
TRAF4-215ENST00000584944 PTPN3P26045 913 aa13.99□□□□□ -0.17
TRAF4-215ENST00000584944 RGRP47804 291 aa13.99□□□□□ -0.17
TRAF4-215ENST00000584944 LMAN1P49257 510 aa13.99□□□□□ -0.17
TRAF4-215ENST00000584944 FAM193AP78312 1265 aa13.99□□□□□ -0.17
TRAF4-215ENST00000584944 ELP6Q0PNE2 266 aa13.99□□□□□ -0.17
TRAF4-215ENST00000584944 CCNG2Q16589 344 aa13.99□□□□□ -0.17
TRAF4-215ENST00000584944 MAP7D1Q3KQU3 841 aa13.99□□□□□ -0.17
TRAF4-215ENST00000584944 RGL4Q8IZJ4 473 aa13.99□□□□□ -0.17
TRAF4-215ENST00000584944 PGBD5Q8N414 524 aa13.99□□□□□ -0.17
TRAF4-215ENST00000584944 AADATQ8N5Z0 425 aa13.99□□□□□ -0.17
TRAF4-215ENST00000584944 ACTRT1Q8TDG2 376 aa13.99□□□□□ -0.17
TRAF4-215ENST00000584944 HCAR2Q8TDS4 363 aa13.99□□□□□ -0.17
TRAF4-215ENST00000584944 COG1Q8WTW3 980 aa13.99□□□□□ -0.17
TRAF4-215ENST00000584944 MAGOHBQ96A72 148 aaKnown RBP13.99□□□□□ -0.17
TRAF4-215ENST00000584944 MS4A14Q96JA4 679 aa13.99□□□□□ -0.17
TRAF4-215ENST00000584944 LOXL4Q96JB6 756 aa13.99□□□□□ -0.17
TRAF4-215ENST00000584944 TEKT5Q96M29 485 aa13.99□□□□□ -0.17
TRAF4-215ENST00000584944 TMEM121Q9BTD3 319 aa13.99□□□□□ -0.17
TRAF4-215ENST00000584944 SLC25A51Q9H1U9 297 aa13.99□□□□□ -0.17
TRAF4-215ENST00000584944 C10orf88Q9H8K7 445 aa13.99□□□□□ -0.17
TRAF4-215ENST00000584944 GLOD4Q9HC38 313 aa13.99□□□□□ -0.17
TRAF4-215ENST00000584944 DKK3Q9UBP4 350 aa13.99□□□□□ -0.17
TRAF4-215ENST00000584944 FEZ2Q9UHY8 353 aaPredicted RBP13.99□□□□□ -0.17
TRAF4-215ENST00000584944 DNPEPQ9ULA0 475 aa13.99□□□□□ -0.17
TRAF4-215ENST00000584944 R3HDM2Q9Y2K5 976 aaKnown RBP13.99□□□□□ -0.17
TRAF4-215ENST00000584944 PCDHB9Q9Y5E1 797 aa13.99□□□□□ -0.17
TRAF4-215ENST00000584944 PCDHGC4Q9Y5F7 938 aa13.99□□□□□ -0.17
TRAF4-215ENST00000584944 RAI2Q9Y5P3 530 aa13.99□□□□□ -0.17
TRAF4-215ENST00000584944 NYNRINQ9P2P1 1898 aaKnown RBP13.99□□□□□ -0.17
TRAF4-215ENST00000584944 EML5Q05BV3 1969 aa13.98□□□□□ -0.17
TRAF4-215ENST00000584944 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.98□□□□□ -0.17
TRAF4-215ENST00000584944 F5H423 210 aaPredicted RBP13.98□□□□□ -0.17
TRAF4-215ENST00000584944 PLK4O00444 970 aa13.98□□□□□ -0.17
TRAF4-215ENST00000584944 PCSK7Q16549 785 aa13.98□□□□□ -0.17
TRAF4-215ENST00000584944 P3H1Q32P28 736 aa13.98□□□□□ -0.17
TRAF4-215ENST00000584944 PPM1JQ5JR12 505 aa13.98□□□□□ -0.17
TRAF4-215ENST00000584944 WDR45BQ5MNZ6 344 aa13.98□□□□□ -0.17
TRAF4-215ENST00000584944 PAPD7Q5XG87 772 aaKnown RBP13.98□□□□□ -0.17
TRAF4-215ENST00000584944 NCEH1Q6PIU2 408 aa13.98□□□□□ -0.17
TRAF4-215ENST00000584944 USP45Q70EL2 814 aa13.98□□□□□ -0.17
TRAF4-215ENST00000584944 ARMCX6Q7L4S7 300 aa13.98□□□□□ -0.17
TRAF4-215ENST00000584944 TMEFF1Q8IYR6 380 aa13.98□□□□□ -0.17
TRAF4-215ENST00000584944 ZNF567Q8N184 647 aa13.98□□□□□ -0.17
TRAF4-215ENST00000584944 DEFB119Q8N690 84 aa13.98□□□□□ -0.17
TRAF4-215ENST00000584944 OR2T34Q8NGX1 318 aa13.98□□□□□ -0.17
TRAF4-215ENST00000584944 ARRDC3Q96B67 414 aa13.98□□□□□ -0.17
TRAF4-215ENST00000584944 FEM1CQ96JP0 617 aa13.98□□□□□ -0.17
TRAF4-215ENST00000584944 SPATA13Q96N96 652 aa13.98□□□□□ -0.17
TRAF4-215ENST00000584944 RBM15Q96T37 977 aaKnown RBP eCLIP13.98□□□□□ -0.174e-6■■■■□ 20
TRAF4-215ENST00000584944 AP1M1Q9BXS5 423 aa13.98□□□□□ -0.17
TRAF4-215ENST00000584944 PCED1AQ9H1Q7 454 aa13.98□□□□□ -0.17
TRAF4-215ENST00000584944 KDM4CQ9H3R0 1056 aa13.98□□□□□ -0.17
TRAF4-215ENST00000584944 PREBQ9HCU5 417 aa13.98□□□□□ -0.17
TRAF4-215ENST00000584944 WSB2Q9NYS7 404 aaPredicted RBP13.98□□□□□ -0.17
TRAF4-215ENST00000584944 RNF14Q9UBS8 474 aa13.98□□□□□ -0.17
TRAF4-215ENST00000584944 TPX2Q9ULW0 747 aaKnown RBP13.98□□□□□ -0.17
TRAF4-215ENST00000584944 ATP8A1Q9Y2Q0 1164 aa13.98□□□□□ -0.17
TRAF4-215ENST00000584944 AAR2Q9Y312 384 aaKnown RBP13.98□□□□□ -0.17
TRAF4-215ENST00000584944 CKAP5Q14008 2032 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 CHD5Q8TDI0 1954 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 SHROOM3Q8TF72 1996 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 UPK3BL1B0FP48 263 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 UPK3BL2E5RIL1 263 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 TSPAN6O43657 245 aa13.97□□□□□ -0.17
TRAF4-215ENST00000584944 PMPCBO75439 489 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms