RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 HEPHQ9BQS7 1158 aa15.88■□□□□ 0.13
SKA2-209ENST00000583976 SLC17A9Q9BYT1 436 aa15.88■□□□□ 0.13
SKA2-209ENST00000583976 OSBPL2Q9H1P3 480 aa15.88■□□□□ 0.13
SKA2-209ENST00000583976 TCEAL2Q9H3H9 227 aaPredicted RBP15.88■□□□□ 0.13
SKA2-209ENST00000583976 PNMA8BQ9ULN7 279 aaPredicted RBP15.88■□□□□ 0.13
SKA2-209ENST00000583976 TFR2Q9UP52 801 aa15.88■□□□□ 0.13
SKA2-209ENST00000583976 PCDHA13Q9Y5I0 950 aa15.88■□□□□ 0.13
SKA2-209ENST00000583976 IGLON5A6NGN9 336 aa15.87■□□□□ 0.13
SKA2-209ENST00000583976 SCAMP1O15126 338 aa15.87■□□□□ 0.13
SKA2-209ENST00000583976 USP12O75317 370 aa15.87■□□□□ 0.13
SKA2-209ENST00000583976 RNF8O76064 485 aa15.87■□□□□ 0.13
SKA2-209ENST00000583976 LCA5LO95447 670 aa15.87■□□□□ 0.13
SKA2-209ENST00000583976 IGFALSP35858 605 aa15.87■□□□□ 0.13
SKA2-209ENST00000583976 PDE1CQ14123 709 aaPredicted RBP15.87■□□□□ 0.13
SKA2-209ENST00000583976 DEFB133Q30KQ1 61 aa15.87■□□□□ 0.13
SKA2-209ENST00000583976 ARL13BQ3SXY8 428 aa15.87■□□□□ 0.13
SKA2-209ENST00000583976 CARD16Q5EG05 197 aa15.87■□□□□ 0.13
SKA2-209ENST00000583976 ATXN7L2Q5T6C5 722 aaPredicted RBP15.87■□□□□ 0.13
SKA2-209ENST00000583976 ZNF783Q6ZMS7 281 aa15.87■□□□□ 0.13
SKA2-209ENST00000583976 NLRP14Q86W24 1093 aa15.87■□□□□ 0.13
SKA2-209ENST00000583976 ARFGAP1Q8N6T3 406 aa15.87■□□□□ 0.13
SKA2-209ENST00000583976 CCDC185Q8N715 623 aa15.87■□□□□ 0.13
SKA2-209ENST00000583976 SLC35G2Q8TBE7 412 aa15.87■□□□□ 0.13
SKA2-209ENST00000583976 HIC2Q96JB3 615 aa15.87■□□□□ 0.13
SKA2-209ENST00000583976 DEPDC7Q96QD5 511 aa15.87■□□□□ 0.13
SKA2-209ENST00000583976 HAPLN3Q96S86 360 aa15.87■□□□□ 0.13
SKA2-209ENST00000583976 CPNE5Q9HCH3 593 aa15.87■□□□□ 0.13
SKA2-209ENST00000583976 HECAQ9UBI9 543 aaPredicted RBP15.87■□□□□ 0.13
SKA2-209ENST00000583976 PCSK1NQ9UHG2 260 aa15.87■□□□□ 0.13
SKA2-209ENST00000583976 DNAI1Q9UI46 699 aa15.87■□□□□ 0.13
SKA2-209ENST00000583976 SPTY2D1-AS1A0A0U1RR47 76 aa15.86■□□□□ 0.13
SKA2-209ENST00000583976 MYO1FO00160 1098 aa15.86■□□□□ 0.13
SKA2-209ENST00000583976 IPO7O95373 1038 aaKnown RBP15.86■□□□□ 0.13
SKA2-209ENST00000583976 CSF2P04141 144 aa15.86■□□□□ 0.13
SKA2-209ENST00000583976 UGT2B4P06133 528 aa15.86■□□□□ 0.13
SKA2-209ENST00000583976 TGM2P21980 687 aa15.86■□□□□ 0.13
SKA2-209ENST00000583976 ADRA1BP35368 520 aa15.86■□□□□ 0.13
SKA2-209ENST00000583976 PCBP4P57723 403 aaKnown RBP15.86■□□□□ 0.13
SKA2-209ENST00000583976 HNRNPKP61978 463 aaKnown RBP eCLIP15.86■□□□□ 0.13
SKA2-209ENST00000583976 CCDC15Q0P6D6 951 aa15.86■□□□□ 0.13
SKA2-209ENST00000583976 EIF2B5Q13144 721 aaKnown RBP15.86■□□□□ 0.13
SKA2-209ENST00000583976 C3orf38Q5JPI3 329 aa15.86■□□□□ 0.13
SKA2-209ENST00000583976 RWDD4Q6NW29 188 aaKnown RBP15.86■□□□□ 0.13
SKA2-209ENST00000583976 EFL1Q7Z2Z2 1120 aaKnown RBP15.86■□□□□ 0.13
SKA2-209ENST00000583976 GPR155Q7Z3F1 870 aa15.86■□□□□ 0.13
SKA2-209ENST00000583976 SLFN11Q7Z7L1 901 aa15.86■□□□□ 0.13
SKA2-209ENST00000583976 FAM181AQ8N9Y4 354 aa15.86■□□□□ 0.13
SKA2-209ENST00000583976 ACRBPQ8NEB7 543 aa15.86■□□□□ 0.13
SKA2-209ENST00000583976 MAPK15Q8TD08 544 aa15.86■□□□□ 0.13
SKA2-209ENST00000583976 LMX1AQ8TE12 382 aa15.86■□□□□ 0.13
SKA2-209ENST00000583976 FNIP1Q8TF40 1166 aa15.86■□□□□ 0.13
SKA2-209ENST00000583976 IFT43Q96FT9 208 aa15.86■□□□□ 0.13
SKA2-209ENST00000583976 ASCL3Q9NQ33 180 aa15.86■□□□□ 0.13
SKA2-209ENST00000583976 TMEM51Q9NW97 253 aa15.86■□□□□ 0.13
SKA2-209ENST00000583976 UVRAGQ9P2Y5 699 aa15.86■□□□□ 0.13
SKA2-209ENST00000583976 IP6K2Q9UHH9 426 aa15.86■□□□□ 0.13
SKA2-209ENST00000583976 KIF26BQ2KJY2 2108 aa15.86■□□□□ 0.13
SKA2-209ENST00000583976 ASH1LQ9NR48 2969 aaKnown RBP15.86■□□□□ 0.13
SKA2-209ENST00000583976 RP1P56715 2156 aa15.86■□□□□ 0.13
SKA2-209ENST00000583976 LRP4O75096 1905 aa15.86■□□□□ 0.13
SKA2-209ENST00000583976 TENM4Q6N022 2769 aa15.85■□□□□ 0.13
SKA2-209ENST00000583976 C16orf96A6NNT2 1141 aa15.85■□□□□ 0.13
SKA2-209ENST00000583976 TMEM110-MUSTN1A8MSY1 372 aa15.85■□□□□ 0.13
SKA2-209ENST00000583976 KRIT1O00522 736 aa15.85■□□□□ 0.13
SKA2-209ENST00000583976 AP1G1O43747 822 aa15.85■□□□□ 0.13
SKA2-209ENST00000583976 LRIG2O94898 1065 aa15.85■□□□□ 0.13
SKA2-209ENST00000583976 CELA2BP08218 269 aaPredicted RBP15.85■□□□□ 0.13
SKA2-209ENST00000583976 JUNDP17535 347 aa15.85■□□□□ 0.13
SKA2-209ENST00000583976 ITIH2P19823 946 aa15.85■□□□□ 0.13
SKA2-209ENST00000583976 SSR1P43307 286 aaKnown RBP15.85■□□□□ 0.13
SKA2-209ENST00000583976 RABIFP47224 123 aa15.85■□□□□ 0.13
SKA2-209ENST00000583976 C19orf57Q0VDD7 668 aa15.85■□□□□ 0.13
SKA2-209ENST00000583976 PIGHQ14442 188 aaPredicted RBP15.85■□□□□ 0.13
SKA2-209ENST00000583976 TCEA2Q15560 299 aa15.85■□□□□ 0.13
SKA2-209ENST00000583976 PERM1Q5SV97 790 aa15.85■□□□□ 0.13
SKA2-209ENST00000583976 ZCCHC8Q6NZY4 707 aaKnown RBP15.85■□□□□ 0.13
SKA2-209ENST00000583976 PYROXD2Q8N2H3 581 aa15.85■□□□□ 0.13
SKA2-209ENST00000583976 ZNF843Q8N446 348 aa15.85■□□□□ 0.13
SKA2-209ENST00000583976 ZNF248Q8NDW4 579 aa15.85■□□□□ 0.13
SKA2-209ENST00000583976 ARHGEF2Q92974 986 aaKnown RBP15.85■□□□□ 0.13
SKA2-209ENST00000583976 DESI2Q9BSY9 194 aa15.85■□□□□ 0.13
SKA2-209ENST00000583976 LUC7LQ9NQ29 371 aaKnown RBP15.85■□□□□ 0.13
SKA2-209ENST00000583976 GPATCH2LQ9NWQ4 482 aa15.85■□□□□ 0.13
SKA2-209ENST00000583976 PPARGC1AQ9UBK2 798 aaKnown RBP15.85■□□□□ 0.13
SKA2-209ENST00000583976 INTUQ9ULD6 942 aa15.85■□□□□ 0.13
SKA2-209ENST00000583976 SATB2Q9UPW6 733 aa15.85■□□□□ 0.13
SKA2-209ENST00000583976 REXO2Q9Y3B8 237 aaKnown RBP15.85■□□□□ 0.13
SKA2-209ENST00000583976 LRRK1Q38SD2 2015 aa15.85■□□□□ 0.13
SKA2-209ENST00000583976 CPED1A4D0V7 1026 aa15.84■□□□□ 0.13
SKA2-209ENST00000583976 H3BM21 787 aa15.84■□□□□ 0.13
SKA2-209ENST00000583976 FPGTO14772 594 aa15.84■□□□□ 0.13
SKA2-209ENST00000583976 AQP9O43315 295 aa15.84■□□□□ 0.13
SKA2-209ENST00000583976 LRCH4O75427 683 aa15.84■□□□□ 0.13
SKA2-209ENST00000583976 GP1BAP07359 652 aa15.84■□□□□ 0.13
SKA2-209ENST00000583976 MIPP30301 263 aa15.84■□□□□ 0.13
SKA2-209ENST00000583976 NOP2P46087 812 aaKnown RBP15.84■□□□□ 0.13
SKA2-209ENST00000583976 PDX1P52945 283 aa15.84■□□□□ 0.13
SKA2-209ENST00000583976 PFN3P60673 137 aa15.84■□□□□ 0.13
SKA2-209ENST00000583976 C1orf61Q13536 156 aa15.84■□□□□ 0.13
SKA2-209ENST00000583976 MESDQ14696 234 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms