RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 GABRG3Q99928 467 aa16.51■□□□□ 0.23
CDK5RAP3-228ENST00000583363 NEUROG2Q9H2A3 272 aa16.51■□□□□ 0.23
CDK5RAP3-228ENST00000583363 LMAN1LQ9HAT1 526 aa16.51■□□□□ 0.23
CDK5RAP3-228ENST00000583363 LTB4R2Q9NPC1 389 aa16.51■□□□□ 0.23
CDK5RAP3-228ENST00000583363 RAB21Q9UL25 225 aa16.51■□□□□ 0.23
CDK5RAP3-228ENST00000583363 SHOC2Q9UQ13 582 aa16.51■□□□□ 0.23
CDK5RAP3-228ENST00000583363 MTF2Q9Y483 593 aaPredicted RBP16.51■□□□□ 0.23
CDK5RAP3-228ENST00000583363 DMXL1Q9Y485 3027 aa16.51■□□□□ 0.23
CDK5RAP3-228ENST00000583363 EP300Q09472 2414 aaPredicted RBP16.5■□□□□ 0.23
CDK5RAP3-228ENST00000583363 STK25O00506 426 aa16.5■□□□□ 0.23
CDK5RAP3-228ENST00000583363 TRAFD1O14545 582 aaPredicted RBP16.5■□□□□ 0.23
CDK5RAP3-228ENST00000583363 HTRA2O43464 458 aaPredicted RBP16.5■□□□□ 0.23
CDK5RAP3-228ENST00000583363 FZD6O60353 706 aa16.5■□□□□ 0.23
CDK5RAP3-228ENST00000583363 ADAM23O75077 832 aa16.5■□□□□ 0.23
CDK5RAP3-228ENST00000583363 RNF40O75150 1001 aa16.5■□□□□ 0.23
CDK5RAP3-228ENST00000583363 KLF8O95600 359 aaPredicted RBP16.5■□□□□ 0.23
CDK5RAP3-228ENST00000583363 PRLP01236 227 aa16.5■□□□□ 0.23
CDK5RAP3-228ENST00000583363 MCM3P25205 808 aa16.5■□□□□ 0.23
CDK5RAP3-228ENST00000583363 TARSP26639 723 aaKnown RBP16.5■□□□□ 0.23
CDK5RAP3-228ENST00000583363 GRIA1P42261 906 aa16.5■□□□□ 0.23
CDK5RAP3-228ENST00000583363 VSNL1P62760 191 aa16.5■□□□□ 0.23
CDK5RAP3-228ENST00000583363 SARNPP82979 210 aaKnown RBP16.5■□□□□ 0.23
CDK5RAP3-228ENST00000583363 CDK18Q07002 472 aa16.5■□□□□ 0.23
CDK5RAP3-228ENST00000583363 BCL2L1Q07817 233 aa16.5■□□□□ 0.23
CDK5RAP3-228ENST00000583363 TRAF2Q12933 501 aa16.5■□□□□ 0.23
CDK5RAP3-228ENST00000583363 OLIG2Q13516 323 aa16.5■□□□□ 0.23
CDK5RAP3-228ENST00000583363 PCSK7Q16549 785 aa16.5■□□□□ 0.23
CDK5RAP3-228ENST00000583363 HSF5Q4G112 596 aaPredicted RBP16.5■□□□□ 0.23
CDK5RAP3-228ENST00000583363 ARSIQ5FYB1 569 aa16.5■□□□□ 0.23
CDK5RAP3-228ENST00000583363 LRRC8BQ6P9F7 803 aa16.5■□□□□ 0.23
CDK5RAP3-228ENST00000583363 ERMP1Q7Z2K6 904 aa16.5■□□□□ 0.23
CDK5RAP3-228ENST00000583363 LINC00523Q86TU6 105 aa16.5■□□□□ 0.23
CDK5RAP3-228ENST00000583363 TXNDC5Q8NBS9 432 aaKnown RBP16.5■□□□□ 0.23
CDK5RAP3-228ENST00000583363 LRIG1Q96JA1 1093 aa16.5■□□□□ 0.23
CDK5RAP3-228ENST00000583363 FEM1CQ96JP0 617 aa16.5■□□□□ 0.23
CDK5RAP3-228ENST00000583363 ZNF641Q96N77 438 aaPredicted RBP16.5■□□□□ 0.23
CDK5RAP3-228ENST00000583363 TRIB3Q96RU7 358 aa16.5■□□□□ 0.23
CDK5RAP3-228ENST00000583363 TBL1YQ9BQ87 522 aa16.5■□□□□ 0.23
CDK5RAP3-228ENST00000583363 FICDQ9BVA6 458 aa16.5■□□□□ 0.23
CDK5RAP3-228ENST00000583363 SUV39H2Q9H5I1 410 aa16.5■□□□□ 0.23
CDK5RAP3-228ENST00000583363 ATP13A3Q9H7F0 1226 aa16.5■□□□□ 0.23
CDK5RAP3-228ENST00000583363 CASS4Q9NQ75 786 aa16.5■□□□□ 0.23
CDK5RAP3-228ENST00000583363 IL36AQ9UHA7 158 aa16.5■□□□□ 0.23
CDK5RAP3-228ENST00000583363 NFU1Q9UMS0 254 aa16.5■□□□□ 0.23
CDK5RAP3-228ENST00000583363 WASF2Q9Y6W5 498 aa16.5■□□□□ 0.23
CDK5RAP3-228ENST00000583363 MUC22E2RYF6 1773 aaPredicted RBP16.49■□□□□ 0.23
CDK5RAP3-228ENST00000583363 FAM170BA6NMN3 283 aa16.49■□□□□ 0.23
CDK5RAP3-228ENST00000583363 GOLGA8MH3BSY2 632 aa16.49■□□□□ 0.23
CDK5RAP3-228ENST00000583363 ALOX15BO15296 676 aa16.49■□□□□ 0.23
CDK5RAP3-228ENST00000583363 USP12O75317 370 aa16.49■□□□□ 0.23
CDK5RAP3-228ENST00000583363 PIGNO95427 931 aa16.49■□□□□ 0.23
CDK5RAP3-228ENST00000583363 CTSLP07711 333 aa16.49■□□□□ 0.23
CDK5RAP3-228ENST00000583363 CBLBQ13191 982 aa16.49■□□□□ 0.23
CDK5RAP3-228ENST00000583363 CAMK2GQ13555 558 aaPredicted RBP16.49■□□□□ 0.23
CDK5RAP3-228ENST00000583363 LRRC32Q14392 662 aa16.49■□□□□ 0.23
CDK5RAP3-228ENST00000583363 HLTFQ14527 1009 aaKnown RBP eCLIP16.49■□□□□ 0.23
CDK5RAP3-228ENST00000583363 NAPEPLDQ6IQ20 393 aa16.49■□□□□ 0.23
CDK5RAP3-228ENST00000583363 DENND5AQ6IQ26 1287 aa16.49■□□□□ 0.23
CDK5RAP3-228ENST00000583363 GDPD4Q6W3E5 623 aa16.49■□□□□ 0.23
CDK5RAP3-228ENST00000583363 ZNF534Q76KX8 674 aa16.49■□□□□ 0.23
CDK5RAP3-228ENST00000583363 KDELC2Q7Z4H8 507 aa16.49■□□□□ 0.23
CDK5RAP3-228ENST00000583363 CAND1Q86VP6 1230 aaKnown RBP16.49■□□□□ 0.23
CDK5RAP3-228ENST00000583363 ZCCHC9Q8N567 271 aaKnown RBP16.49■□□□□ 0.23
CDK5RAP3-228ENST00000583363 TMIEQ8NEW7 156 aa16.49■□□□□ 0.23
CDK5RAP3-228ENST00000583363 OR8D1Q8WZ84 308 aa16.49■□□□□ 0.23
CDK5RAP3-228ENST00000583363 IFT43Q96FT9 208 aa16.49■□□□□ 0.23
CDK5RAP3-228ENST00000583363 PWWP2AQ96N64 755 aa16.49■□□□□ 0.23
CDK5RAP3-228ENST00000583363 TDRD1Q9BXT4 1180 aaKnown RBP16.49■□□□□ 0.23
CDK5RAP3-228ENST00000583363 FRMD8Q9BZ67 464 aaPredicted RBP16.49■□□□□ 0.23
CDK5RAP3-228ENST00000583363 FOXP3Q9BZS1 431 aa16.49■□□□□ 0.23
CDK5RAP3-228ENST00000583363 ZDHHC6Q9H6R6 413 aa16.49■□□□□ 0.23
CDK5RAP3-228ENST00000583363 ARNT2Q9HBZ2 717 aa16.49■□□□□ 0.23
CDK5RAP3-228ENST00000583363 PPM1HQ9ULR3 514 aa16.49■□□□□ 0.23
CDK5RAP3-228ENST00000583363 CHKBQ9Y259 395 aa16.49■□□□□ 0.23
CDK5RAP3-228ENST00000583363 CACNA1AO00555 2505 aa16.48■□□□□ 0.23
CDK5RAP3-228ENST00000583363 SYNCRIPO60506 623 aaKnown RBP16.48■□□□□ 0.23
CDK5RAP3-228ENST00000583363 SOCS5O75159 536 aa16.48■□□□□ 0.23
CDK5RAP3-228ENST00000583363 PPFIA2O75334 1257 aa16.48■□□□□ 0.23
CDK5RAP3-228ENST00000583363 LEFTY1O75610 366 aa16.48■□□□□ 0.23
CDK5RAP3-228ENST00000583363 PGLSO95336 258 aa16.48■□□□□ 0.23
CDK5RAP3-228ENST00000583363 NDST3O95803 873 aa16.48■□□□□ 0.23
CDK5RAP3-228ENST00000583363 PDHA1P08559 390 aa16.48■□□□□ 0.23
CDK5RAP3-228ENST00000583363 ATXN1LP0C7T5 689 aaKnown RBP16.48■□□□□ 0.23
CDK5RAP3-228ENST00000583363 MLNP12872 115 aa16.48■□□□□ 0.23
CDK5RAP3-228ENST00000583363 CA4P22748 312 aa16.48■□□□□ 0.23
CDK5RAP3-228ENST00000583363 SERPINA4P29622 427 aa16.48■□□□□ 0.23
CDK5RAP3-228ENST00000583363 ELAVL3Q14576 367 aaKnown RBP16.48■□□□□ 0.23
CDK5RAP3-228ENST00000583363 UBXN2BQ14CS0 331 aa16.48■□□□□ 0.23
CDK5RAP3-228ENST00000583363 SLC1A5Q15758 541 aa16.48■□□□□ 0.23
CDK5RAP3-228ENST00000583363 EOGTQ5NDL2 527 aa16.48■□□□□ 0.23
CDK5RAP3-228ENST00000583363 FNBP1LQ5T0N5 605 aa16.48■□□□□ 0.23
CDK5RAP3-228ENST00000583363 ARMC12Q5T9G4 340 aa16.48■□□□□ 0.23
CDK5RAP3-228ENST00000583363 PPP1R21Q6ZMI0 780 aa16.48■□□□□ 0.23
CDK5RAP3-228ENST00000583363 OR52K1Q8NGK4 314 aa16.48■□□□□ 0.23
CDK5RAP3-228ENST00000583363 RPLP0P6Q8NHW5 317 aa16.48■□□□□ 0.23
CDK5RAP3-228ENST00000583363 HCAR2Q8TDS4 363 aa16.48■□□□□ 0.23
CDK5RAP3-228ENST00000583363 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.48■□□□□ 0.234e-10■□□□□ 9.4
CDK5RAP3-228ENST00000583363 ECHDC3Q96DC8 303 aa16.48■□□□□ 0.23
CDK5RAP3-228ENST00000583363 SERPINB12Q96P63 405 aa16.48■□□□□ 0.23
CDK5RAP3-228ENST00000583363 APOL2Q9BQE5 337 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms