RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 LLGL1Q15334 1064 aa12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 UGP2Q16851 508 aa12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 KAZNQ674X7 775 aa12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 SLC9A4Q6AI14 798 aa12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 ERAP2Q6P179 960 aa12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 BRAT1Q6PJG6 821 aa12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 MFSD7Q6UXD7 560 aa12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 NPNTQ6UXI9 565 aa12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 ERMP1Q7Z2K6 904 aa12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 ZSCAN30Q86W11 494 aa12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 CCDC50Q8IVM0 306 aa12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 PGBD5Q8N414 524 aa12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 PLD5Q8N7P1 536 aa12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 MFSD2AQ8NA29 543 aa12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 DEFB124Q8NES8 71 aa12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 HCAR2Q8TDS4 363 aa12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 PDCD6IPQ8WUM4 868 aaKnown RBP12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 CALR3Q96L12 384 aaKnown RBP12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 NUDCD1Q96RS6 583 aa12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 MGME1Q9BQP7 344 aa12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 WRAP53Q9BUR4 548 aaKnown RBP12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 GDF3Q9NR23 364 aa12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 TM7SF3Q9NS93 570 aa12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 HAUS2Q9NVX0 235 aa12.72□□□□□ -0.37
SMARCE1-218ENST00000582955 MACROD2A1Z1Q3 448 aa12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 H0Y8X5 98 aa12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 MATN3O15232 486 aa12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 PJA2O43164 708 aa12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 MMP20O60882 483 aa12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 ZRANB2O95218 330 aaKnown RBP eCLIP12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 PRKCGP05129 697 aa12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 KRT10P13645 584 aa12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 CDKN2BP42772 138 aa12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 MARCKSL1P49006 195 aa12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 NOVA1P51513 510 aaKnown RBP12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 CLDN2P57739 230 aa12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 NXPH1P58417 271 aa12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 IL9RQ01113 521 aa12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 SLC14A1Q13336 389 aa12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 TFDP2Q14188 446 aa12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 FGL2Q14314 439 aa12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 PRAMEF14Q5SWL7 426 aa12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 PSAPL1Q6NUJ1 521 aa12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 SPOCD1Q6ZMY3 1216 aa12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 IQCHQ86VS3 1027 aa12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 ZSWIM9Q86XI8 627 aa12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 CCDC13Q8IYE1 715 aa12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 KATNAL2Q8IYT4 538 aa12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 TEX26Q8N6G2 289 aa12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 TMEM145Q8NBT3 493 aa12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 MAML1Q92585 1016 aa12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 KRT35Q92764 455 aa12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 HDAC11Q96DB2 347 aa12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 KLHDC7BQ96G42 594 aa12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 RBM41Q96IZ5 413 aaKnown RBP12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 NSMCE3Q96MG7 304 aa12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 TSGA13Q96PP4 275 aa12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 POLR1EQ9GZS1 481 aaKnown RBP12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 SLC32A1Q9H598 525 aa12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 NOD2Q9HC29 1040 aa12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 PCDH12Q9NPG4 1184 aa12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 RBM22Q9NW64 420 aaKnown RBP eCLIP12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 TRIM10Q9UDY6 481 aa12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 ATP8A1Q9Y2Q0 1164 aa12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 PCDHGC4Q9Y5F7 938 aa12.71□□□□□ -0.37
SMARCE1-218ENST00000582955 DOCK9Q9BZ29 2069 aa12.71□□□□□ -0.38
SMARCE1-218ENST00000582955 TRPM6Q9BX84 2022 aa12.71□□□□□ -0.38
SMARCE1-218ENST00000582955 ASCC3Q8N3C0 2202 aaKnown RBP12.7□□□□□ -0.38
SMARCE1-218ENST00000582955 PPP1R12AO14974 1030 aaPredicted RBP12.7□□□□□ -0.38
SMARCE1-218ENST00000582955 RAD51BO15315 384 aa12.7□□□□□ -0.38
SMARCE1-218ENST00000582955 SH3BP5O60239 455 aa12.7□□□□□ -0.38
SMARCE1-218ENST00000582955 DFNA5O60443 496 aa12.7□□□□□ -0.38
SMARCE1-218ENST00000582955 SOCS5O75159 536 aa12.7□□□□□ -0.38
SMARCE1-218ENST00000582955 TM7SF2O76062 418 aa12.7□□□□□ -0.38
SMARCE1-218ENST00000582955 KCNK5O95279 499 aa12.7□□□□□ -0.38
SMARCE1-218ENST00000582955 ZNF883P0CG24 379 aa12.7□□□□□ -0.38
SMARCE1-218ENST00000582955 THEGLP0DJG4 465 aa12.7□□□□□ -0.38
SMARCE1-218ENST00000582955 CD59P13987 128 aa12.7□□□□□ -0.38
SMARCE1-218ENST00000582955 CCNB1P14635 433 aa12.7□□□□□ -0.38
SMARCE1-218ENST00000582955 CR2P20023 1033 aa12.7□□□□□ -0.38
SMARCE1-218ENST00000582955 CSRP1P21291 193 aaKnown RBP12.7□□□□□ -0.38
SMARCE1-218ENST00000582955 CTNNA1P35221 906 aaKnown RBP12.7□□□□□ -0.38
SMARCE1-218ENST00000582955 CCT8P50990 548 aa12.7□□□□□ -0.38
SMARCE1-218ENST00000582955 POLR2LP62875 67 aaKnown RBP12.7□□□□□ -0.38
SMARCE1-218ENST00000582955 FAM193AP78312 1265 aa12.7□□□□□ -0.38
SMARCE1-218ENST00000582955 SEMG2Q02383 582 aa12.7□□□□□ -0.38
SMARCE1-218ENST00000582955 AP1B1Q10567 949 aa12.7□□□□□ -0.38
SMARCE1-218ENST00000582955 OVGP1Q12889 678 aa12.7□□□□□ -0.38
SMARCE1-218ENST00000582955 PDK1Q15118 436 aa12.7□□□□□ -0.38
SMARCE1-218ENST00000582955 ZNF423Q2M1K9 1284 aa12.7□□□□□ -0.38
SMARCE1-218ENST00000582955 RALGPS1Q5JS13 557 aa12.7□□□□□ -0.38
SMARCE1-218ENST00000582955 GCNT7Q6ZNI0 430 aa12.7□□□□□ -0.38
SMARCE1-218ENST00000582955 PTAR1Q7Z6K3 402 aaPredicted RBP12.7□□□□□ -0.38
SMARCE1-218ENST00000582955 NAXDQ8IW45 347 aa12.7□□□□□ -0.38
SMARCE1-218ENST00000582955 RCOR2Q8IZ40 523 aa12.7□□□□□ -0.38
SMARCE1-218ENST00000582955 KIAA1524Q8TCG1 905 aa12.7□□□□□ -0.38
SMARCE1-218ENST00000582955 SETD7Q8WTS6 366 aaKnown RBP12.7□□□□□ -0.38
SMARCE1-218ENST00000582955 FATE1Q969F0 183 aa12.7□□□□□ -0.38
SMARCE1-218ENST00000582955 ECHDC3Q96DC8 303 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms