RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 NOL11Q9H8H0 719 aaKnown RBP13.8□□□□□ -0.2
RNF43-205ENST00000581868 NDFIP2Q9NV92 336 aa13.8□□□□□ -0.2
RNF43-205ENST00000581868 RBM22Q9NW64 420 aaKnown RBP eCLIP13.8□□□□□ -0.26e-7■■■□□ 16.6
RNF43-205ENST00000581868 SUCOQ9UBS9 1254 aaKnown RBP13.8□□□□□ -0.2
RNF43-205ENST00000581868 ARHGAP10A1A4S6 786 aa13.8□□□□□ -0.2
RNF43-205ENST00000581868 A8MT66 165 aa13.8□□□□□ -0.2
RNF43-205ENST00000581868 HHLA1C9JL84 531 aa13.8□□□□□ -0.2
RNF43-205ENST00000581868 HOXD8P13378 290 aaPredicted RBP13.8□□□□□ -0.2
RNF43-205ENST00000581868 PAMP19021 973 aa13.8□□□□□ -0.2
RNF43-205ENST00000581868 CCNCP24863 283 aa13.8□□□□□ -0.2
RNF43-205ENST00000581868 YWHAQP27348 245 aa13.8□□□□□ -0.2
RNF43-205ENST00000581868 LRPAP1P30533 357 aa13.8□□□□□ -0.2
RNF43-205ENST00000581868 CLCNKBP51801 687 aa13.8□□□□□ -0.2
RNF43-205ENST00000581868 RHDQ02161 417 aa13.8□□□□□ -0.2
RNF43-205ENST00000581868 IKBKEQ14164 716 aa13.8□□□□□ -0.2
RNF43-205ENST00000581868 PCBP1Q15365 356 aaKnown RBP eCLIP13.8□□□□□ -0.24e-6■■■■■ 41.5
RNF43-205ENST00000581868 EGFL6Q8IUX8 553 aa13.8□□□□□ -0.2
RNF43-205ENST00000581868 DQX1Q8TE96 717 aaKnown RBP13.8□□□□□ -0.2
RNF43-205ENST00000581868 MAML3Q96JK9 1138 aa13.8□□□□□ -0.2
RNF43-205ENST00000581868 TSGA13Q96PP4 275 aa13.8□□□□□ -0.2
RNF43-205ENST00000581868 PPP1R10Q96QC0 940 aaKnown RBP13.8□□□□□ -0.2
RNF43-205ENST00000581868 TMEM79Q9BSE2 394 aa13.8□□□□□ -0.2
RNF43-205ENST00000581868 SLC39A8Q9C0K1 460 aa13.8□□□□□ -0.2
RNF43-205ENST00000581868 HSFX1Q9UBD0 423 aa13.8□□□□□ -0.2
RNF43-205ENST00000581868 MRASO14807 208 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 CACNG3O60359 315 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 IPO13O94829 963 aaKnown RBP13.79□□□□□ -0.2
RNF43-205ENST00000581868 TMCC1O94876 653 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 CAPNS1P04632 268 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 HLA-DQB2P05538 268 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 SNRPB2P08579 225 aaKnown RBP13.79□□□□□ -0.2
RNF43-205ENST00000581868 BDNFP23560 247 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 KPNA2P52292 529 aaKnown RBP13.79□□□□□ -0.2
RNF43-205ENST00000581868 NME5P56597 212 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 DNAJB13P59910 316 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 POU4F1Q01851 419 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 SQLEQ14534 574 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 POTEHQ6S545 545 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 CHSY3Q70JA7 882 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 ARHGAP12Q8IWW6 846 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 CHERPQ8IWX8 916 aaKnown RBP13.79□□□□□ -0.2
RNF43-205ENST00000581868 SLCO4A1Q96BD0 722 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 TMIGD2Q96BF3 282 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 TINF2Q9BSI4 451 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 EML4Q9HC35 981 aaKnown RBP13.79□□□□□ -0.2
RNF43-205ENST00000581868 FBRSL1Q9HCM7 1045 aaKnown RBP13.79□□□□□ -0.2
RNF43-205ENST00000581868 SPAG4Q9NPE6 437 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 RRN3Q9NYV6 651 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 MBLAC1A4D2B0 266 aaPredicted RBP13.79□□□□□ -0.2
RNF43-205ENST00000581868 PDHXO00330 501 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 MAFKO60675 156 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 PYGLP06737 847 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 C8BP07358 591 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 DNAJB1P25685 340 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 SLC5A2P31639 672 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 LHX1P48742 406 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 POLD2P49005 469 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 GEMP55040 296 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 MFSD10Q14728 455 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 MAPRE2Q15555 327 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 TMEM259Q4ZIN3 620 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 TECRLQ5HYJ1 363 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 KRT80Q6KB66 452 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 LDB1Q86U70 411 aaPredicted RBP13.79□□□□□ -0.2
RNF43-205ENST00000581868 AFAP1L2Q8N4X5 818 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 C3orf58Q8NDZ4 430 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 STON2Q8WXE9 905 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 PHF12Q96QT6 1004 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 GAD1Q99259 594 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 ABHD16BQ9H3Z7 469 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 IL1RL2Q9HB29 575 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 PREBQ9HCU5 417 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 PHF24Q9UPV7 400 aa13.79□□□□□ -0.2
RNF43-205ENST00000581868 ZNF839A8K0R7 811 aa13.78□□□□□ -0.2
RNF43-205ENST00000581868 CCL22O00626 93 aa13.78□□□□□ -0.2
RNF43-205ENST00000581868 TRIM24O15164 1050 aa13.78□□□□□ -0.2
RNF43-205ENST00000581868 MATN3O15232 486 aa13.78□□□□□ -0.2
RNF43-205ENST00000581868 TIPRLO75663 272 aa13.78□□□□□ -0.2
RNF43-205ENST00000581868 CKMT2P17540 419 aa13.78□□□□□ -0.2
RNF43-205ENST00000581868 PAN2Q504Q3 1202 aaKnown RBP13.78□□□□□ -0.2
RNF43-205ENST00000581868 AGAP9Q5VTM2 703 aa13.78□□□□□ -0.2
RNF43-205ENST00000581868 SCAMP5Q8TAC9 235 aa13.78□□□□□ -0.2
RNF43-205ENST00000581868 FAM110BQ8TC76 370 aa13.78□□□□□ -0.2
RNF43-205ENST00000581868 ANKRD49Q8WVL7 239 aa13.78□□□□□ -0.2
RNF43-205ENST00000581868 LPPQ93052 612 aa13.78□□□□□ -0.2
RNF43-205ENST00000581868 SMARCD1Q96GM5 515 aa13.78□□□□□ -0.2
RNF43-205ENST00000581868 ZNF597Q96LX8 424 aa13.78□□□□□ -0.2
RNF43-205ENST00000581868 MEAF6Q9HAF1 191 aa13.78□□□□□ -0.2
RNF43-205ENST00000581868 SPON1Q9HCB6 807 aa13.78□□□□□ -0.2
RNF43-205ENST00000581868 MRPL40Q9NQ50 206 aaKnown RBP13.78□□□□□ -0.2
RNF43-205ENST00000581868 TREX1Q9NSU2 369 aa13.78□□□□□ -0.2
RNF43-205ENST00000581868 RGS17Q9UGC6 210 aaPredicted RBP13.78□□□□□ -0.2
RNF43-205ENST00000581868 CROTQ9UKG9 612 aa13.78□□□□□ -0.2
RNF43-205ENST00000581868 NUDT5Q9UKK9 219 aa13.78□□□□□ -0.2
RNF43-205ENST00000581868 CNOT11Q9UKZ1 510 aaKnown RBP13.78□□□□□ -0.2
RNF43-205ENST00000581868 TMCO1Q9UM00 188 aa13.78□□□□□ -0.2
RNF43-205ENST00000581868 CEPT1Q9Y6K0 416 aa13.78□□□□□ -0.2
RNF43-205ENST00000581868 CASTOR2A6NHX0 329 aa13.78□□□□□ -0.2
RNF43-205ENST00000581868 MSI1O43347 362 aaKnown RBP13.78□□□□□ -0.2
RNF43-205ENST00000581868 SRP72O76094 671 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms