RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 TIMP2P16035 220 aa18.09■□□□□ 0.49
MKS1-209ENST00000580127 EPHB2P29323 1055 aa18.09■□□□□ 0.49
MKS1-209ENST00000580127 IGFALSP35858 605 aa18.09■□□□□ 0.49
MKS1-209ENST00000580127 ZSCAN23Q3MJ62 389 aa18.09■□□□□ 0.49
MKS1-209ENST00000580127 PARP15Q460N3 678 aa18.09■□□□□ 0.49
MKS1-209ENST00000580127 TMEM52BQ4KMG9 183 aa18.09■□□□□ 0.49
MKS1-209ENST00000580127 TCP11X2Q5H9J9 407 aa18.09■□□□□ 0.49
MKS1-209ENST00000580127 TPRG1LQ5T0D9 272 aa18.09■□□□□ 0.49
MKS1-209ENST00000580127 FKBP15Q5T1M5 1219 aa18.09■□□□□ 0.49
MKS1-209ENST00000580127 RD3Q7Z3Z2 195 aa18.09■□□□□ 0.49
MKS1-209ENST00000580127 CLEC14AQ86T13 490 aa18.09■□□□□ 0.49
MKS1-209ENST00000580127 FBXO39Q8N4B4 442 aa18.09■□□□□ 0.49
MKS1-209ENST00000580127 SLC30A5Q8TAD4 765 aa18.09■□□□□ 0.49
MKS1-209ENST00000580127 FAM172AQ8WUF8 416 aa18.09■□□□□ 0.49
MKS1-209ENST00000580127 LIN37Q96GY3 246 aaPredicted RBP18.09■□□□□ 0.49
MKS1-209ENST00000580127 TMEM74Q96NL1 305 aa18.09■□□□□ 0.49
MKS1-209ENST00000580127 TCEAL2Q9H3H9 227 aaPredicted RBP18.09■□□□□ 0.49
MKS1-209ENST00000580127 ADAM22Q9P0K1 906 aa18.09■□□□□ 0.49
MKS1-209ENST00000580127 GPR34Q9UPC5 381 aa18.09■□□□□ 0.49
MKS1-209ENST00000580127 FAM72CH0Y354 149 aa18.08■□□□□ 0.48
MKS1-209ENST00000580127 PLD2O14939 933 aa18.08■□□□□ 0.48
MKS1-209ENST00000580127 TNFP01375 233 aa18.08■□□□□ 0.48
MKS1-209ENST00000580127 CALB1P05937 261 aa18.08■□□□□ 0.48
MKS1-209ENST00000580127 GPD1P21695 349 aa18.08■□□□□ 0.48
MKS1-209ENST00000580127 STAT1P42224 750 aa18.08■□□□□ 0.48
MKS1-209ENST00000580127 AIF1P55008 147 aa18.08■□□□□ 0.48
MKS1-209ENST00000580127 SKOR1P84550 965 aa18.08■□□□□ 0.48
MKS1-209ENST00000580127 LY6DQ14210 128 aa18.08■□□□□ 0.48
MKS1-209ENST00000580127 FAM72AQ5TYM5 149 aa18.08■□□□□ 0.48
MKS1-209ENST00000580127 FAM72DQ6L9T8 149 aa18.08■□□□□ 0.48
MKS1-209ENST00000580127 SCYL2Q6P3W7 929 aa18.08■□□□□ 0.48
MKS1-209ENST00000580127 ENPP7Q6UWV6 458 aa18.08■□□□□ 0.48
MKS1-209ENST00000580127 RAB11FIP2Q7L804 512 aa18.08■□□□□ 0.48
MKS1-209ENST00000580127 PHLDB2Q86SQ0 1253 aa18.08■□□□□ 0.48
MKS1-209ENST00000580127 FAM72BQ86X60 149 aa18.08■□□□□ 0.48
MKS1-209ENST00000580127 DNAAF5Q86Y56 855 aa18.08■□□□□ 0.48
MKS1-209ENST00000580127 PAF1Q8N7H5 531 aa18.08■□□□□ 0.48
MKS1-209ENST00000580127 RTL3Q8N8U3 475 aaKnown RBP18.08■□□□□ 0.48
MKS1-209ENST00000580127 TTC9Q92623 222 aa18.08■□□□□ 0.48
MKS1-209ENST00000580127 ZNF641Q96N77 438 aaPredicted RBP18.08■□□□□ 0.48
MKS1-209ENST00000580127 C11orf70Q9BRQ4 267 aa18.08■□□□□ 0.48
MKS1-209ENST00000580127 EDEM3Q9BZQ6 932 aa18.08■□□□□ 0.48
MKS1-209ENST00000580127 CLPBQ9H078 707 aa18.08■□□□□ 0.48
MKS1-209ENST00000580127 MBNL1Q9NR56 388 aaKnown RBP18.08■□□□□ 0.48
MKS1-209ENST00000580127 SEPT10Q9P0V9 454 aa18.08■□□□□ 0.48
MKS1-209ENST00000580127 NOCTQ9UK39 431 aaKnown RBP18.08■□□□□ 0.48
MKS1-209ENST00000580127 PCDHGA7Q9Y5G6 932 aa18.08■□□□□ 0.48
MKS1-209ENST00000580127 KIF26BQ2KJY2 2108 aa18.08■□□□□ 0.48
MKS1-209ENST00000580127 NTN3O00634 580 aaPredicted RBP18.07■□□□□ 0.48
MKS1-209ENST00000580127 RFC1P35251 1148 aaPredicted RBP18.07■□□□□ 0.48
MKS1-209ENST00000580127 SOX5P35711 763 aa18.07■□□□□ 0.48
MKS1-209ENST00000580127 INHBCP55103 352 aa18.07■□□□□ 0.48
MKS1-209ENST00000580127 SRP54P61011 504 aaKnown RBP18.07■□□□□ 0.48
MKS1-209ENST00000580127 POLR2FP61218 127 aaKnown RBP18.07■□□□□ 0.48
MKS1-209ENST00000580127 SERINC3Q13530 473 aa18.07■□□□□ 0.48
MKS1-209ENST00000580127 UGP2Q16851 508 aa18.07■□□□□ 0.48
MKS1-209ENST00000580127 LRRC73Q5JTD7 316 aa18.07■□□□□ 0.48
MKS1-209ENST00000580127 BRAT1Q6PJG6 821 aa18.07■□□□□ 0.48
MKS1-209ENST00000580127 TP53I13Q8NBR0 393 aaPredicted RBP18.07■□□□□ 0.48
MKS1-209ENST00000580127 TMEM159Q96B96 161 aa18.07■□□□□ 0.48
MKS1-209ENST00000580127 HMCESQ96FZ2 354 aa18.07■□□□□ 0.48
MKS1-209ENST00000580127 PRR11Q96HE9 360 aaPredicted RBP18.07■□□□□ 0.48
MKS1-209ENST00000580127 APOOQ9BUR5 198 aa18.07■□□□□ 0.48
MKS1-209ENST00000580127 CLSTN2Q9H4D0 955 aa18.07■□□□□ 0.48
MKS1-209ENST00000580127 SUV39H2Q9H5I1 410 aa18.07■□□□□ 0.48
MKS1-209ENST00000580127 EPB41L5Q9HCM4 733 aa18.07■□□□□ 0.48
MKS1-209ENST00000580127 SIRPGQ9P1W8 387 aa18.07■□□□□ 0.48
MKS1-209ENST00000580127 KLQ9UEF7 1012 aa18.07■□□□□ 0.48
MKS1-209ENST00000580127 CFAP46Q8IYW2 2715 aa18.07■□□□□ 0.48
MKS1-209ENST00000580127 UNC13CQ8NB66 2214 aa18.06■□□□□ 0.48
MKS1-209ENST00000580127 SIGLEC16A6NMB1 481 aa18.06■□□□□ 0.48
MKS1-209ENST00000580127 RASA4BC9J798 803 aa18.06■□□□□ 0.48
MKS1-209ENST00000580127 FGF10O15520 208 aaPredicted RBP18.06■□□□□ 0.48
MKS1-209ENST00000580127 ZW10O43264 779 aa18.06■□□□□ 0.48
MKS1-209ENST00000580127 RASA4O43374 803 aa18.06■□□□□ 0.48
MKS1-209ENST00000580127 CREB3O43889 395 aa18.06■□□□□ 0.48
MKS1-209ENST00000580127 JMJD7P0C870 316 aa18.06■□□□□ 0.48
MKS1-209ENST00000580127 KELP23276 732 aa18.06■□□□□ 0.48
MKS1-209ENST00000580127 HTR7P34969 479 aa18.06■□□□□ 0.48
MKS1-209ENST00000580127 HDAC4P56524 1084 aa18.06■□□□□ 0.48
MKS1-209ENST00000580127 POLR2LP62875 67 aaKnown RBP18.06■□□□□ 0.48
MKS1-209ENST00000580127 FMO1Q01740 532 aa18.06■□□□□ 0.48
MKS1-209ENST00000580127 INPP5AQ14642 412 aa18.06■□□□□ 0.48
MKS1-209ENST00000580127 NFATC4Q14934 902 aa18.06■□□□□ 0.48
MKS1-209ENST00000580127 IRF4Q15306 451 aa18.06■□□□□ 0.48
MKS1-209ENST00000580127 DPCR1Q3MIW9 517 aa18.06■□□□□ 0.48
MKS1-209ENST00000580127 USP53Q70EK8 1073 aa18.06■□□□□ 0.48
MKS1-209ENST00000580127 JAMLQ86YT9 394 aa18.06■□□□□ 0.48
MKS1-209ENST00000580127 UMODL1-AS1Q8N2C9 162 aa18.06■□□□□ 0.48
MKS1-209ENST00000580127 CCDC185Q8N715 623 aa18.06■□□□□ 0.48
MKS1-209ENST00000580127 ANKRD20A12PQ8NF67 263 aa18.06■□□□□ 0.48
MKS1-209ENST00000580127 PCDH19Q8TAB3 1148 aa18.06■□□□□ 0.48
MKS1-209ENST00000580127 JOSD2Q8TAC2 188 aa18.06■□□□□ 0.48
MKS1-209ENST00000580127 SLC20A1Q8WUM9 679 aa18.06■□□□□ 0.48
MKS1-209ENST00000580127 TSACCQ96A04 125 aaPredicted RBP18.06■□□□□ 0.48
MKS1-209ENST00000580127 TUBGCP5Q96RT8 1024 aa18.06■□□□□ 0.48
MKS1-209ENST00000580127 SAMSN1Q9NSI8 373 aaKnown RBP18.06■□□□□ 0.48
MKS1-209ENST00000580127 UBA2Q9UBT2 640 aaPredicted RBP18.06■□□□□ 0.48
MKS1-209ENST00000580127 ATXN7L1Q9ULK2 861 aaPredicted RBP18.06■□□□□ 0.48
MKS1-209ENST00000580127 A0A1W2PNU3 283 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms