RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 KRT83P78385 493 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 GNA12Q03113 381 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 GBE1Q04446 702 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 PCDH1Q08174 1060 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 MTAPQ13126 283 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 SERINC3Q13530 473 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 ZNF234Q14588 700 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 EIF4HQ15056 248 aaKnown RBP3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 SPA17Q15506 151 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 NKPD1Q17RQ9 610 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 ANO4Q32M45 955 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 BOLA3Q53S33 107 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 ANKRD20A8PQ5CZ79 823 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 MEI1Q5TIA1 1274 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 MBLAC2Q68D91 279 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 GRAMD4Q6IC98 578 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 KIAA1211LQ6NV74 962 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 SCYL2Q6P3W7 929 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 C1orf228Q6PIY5 440 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 MFSD7Q6UXD7 560 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 ZNF852Q6ZMS4 543 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 ZNF783Q6ZMS7 281 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 ARHGAP36Q6ZRI8 547 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 TFAP2DQ7Z6R9 452 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 SETD3Q86TU7 594 aaPredicted RBP3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 RASSF3Q86WH2 238 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 MFN1Q8IWA4 741 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 SUGP1Q8IWZ8 645 aaKnown RBP3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 RHOT1Q8IXI2 618 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 AHI1Q8N157 1196 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 C17orf53Q8N3J3 647 aaPredicted RBP3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 SYNPOQ8N3V7 929 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 RNF10Q8N5U6 811 aaKnown RBP3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 DCAF4L2Q8NA75 395 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 NETO2Q8NC67 525 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 SLC16A11Q8NCK7 471 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 TTC16Q8NEE8 873 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 KIAA1524Q8TCG1 905 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 CSGALNACT1Q8TDX6 532 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 WFIKKN2Q8TEU8 576 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 DDI1Q8WTU0 396 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 SORCS1Q8WY21 1168 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 ARHGEF2Q92974 986 aaKnown RBP3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 FATE1Q969F0 183 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 HMCESQ96FZ2 354 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 RPRD1AQ96P16 312 aaPredicted RBP3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 RNF157Q96PX1 679 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 NCAPGQ9BPX3 1015 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 FEM1AQ9BSK4 669 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 LRFN3Q9BTN0 628 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 SLC39A8Q9C0K1 460 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 SIK2Q9H0K1 926 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 CLEC4MQ9H2X3 399 aaPredicted RBP3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 MTG2Q9H4K7 406 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 DHX35Q9H5Z1 703 aaKnown RBP3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 RETREG1Q9H6L5 497 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 ZWILCHQ9H900 591 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 DNAJC17Q9NVM6 304 aaKnown RBP3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 ELOVL2Q9NXB9 296 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 STIM2Q9P246 746 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 DEC1Q9P2X7 70 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 THAP10Q9P2Z0 257 aaPredicted RBP3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 LHX3Q9UBR4 397 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 LCMT1Q9UIC8 334 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 VPS51Q9UID3 782 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 MMP17Q9ULZ9 603 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 NDRG2Q9UN36 371 aaKnown RBP3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 PACSIN2Q9UNF0 486 aaPredicted RBP3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 HS3ST2Q9Y278 367 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 SDK1Q7Z5N4 2213 aa3.87□□□□□ -1.79
SMARCE1-215ENST00000578995 KNL1Q8NG31 2342 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 ZC3H12DA2A288 527 aaKnown RBP3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 WASH3PC4AMC7 463 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 RASA4BC9J798 803 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 J3KR12 359 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 K7ERQ8 282 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 EEF2KO00418 725 aaKnown RBP3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 RASA4O43374 803 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 KDELR3O43731 214 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 CREB3O43889 395 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 PRAMEF11O60813 436 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 RNGTTO60942 597 aaKnown RBP3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 SRGAP2O75044 1071 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 ECEL1O95672 775 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 IGLV3-19P01714 112 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 CYBBP04839 570 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 APODP05090 189 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 CTSLP07711 333 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 RHOCP08134 193 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 KRT7P08729 469 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 DLDP09622 509 aaKnown RBP3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 PYGMP11217 842 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 KRT10P13645 584 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 VAV1P15498 845 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 CR2P20023 1033 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 EPHB2P29323 1055 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 AVPR2P30518 371 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 HOXA6P31267 233 aa3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 NOP2P46087 812 aaKnown RBP3.86□□□□□ -1.79
SMARCE1-215ENST00000578995 NUMBP49757 651 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms