RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 MRM3Q9HC36 420 aaKnown RBP13.54□□□□□ -0.24
SRSF1-202ENST00000578430 THAP10Q9P2Z0 257 aaPredicted RBP13.54□□□□□ -0.24
SRSF1-202ENST00000578430 ZC3H7BQ9UGR2 993 aaKnown RBP13.54□□□□□ -0.24
SRSF1-202ENST00000578430 SUN2Q9UH99 717 aa13.54□□□□□ -0.24
SRSF1-202ENST00000578430 EVLQ9UI08 416 aaPredicted RBP13.54□□□□□ -0.24
SRSF1-202ENST00000578430 CHMP2BQ9UQN3 213 aa13.54□□□□□ -0.24
SRSF1-202ENST00000578430 MAD1L1Q9Y6D9 718 aa13.54□□□□□ -0.24
SRSF1-202ENST00000578430 PIAS3Q9Y6X2 628 aa13.54□□□□□ -0.24
SRSF1-202ENST00000578430 TICRRQ7Z2Z1 1910 aa13.53□□□□□ -0.24
SRSF1-202ENST00000578430 A0A087WUV0 522 aaPredicted RBP13.53□□□□□ -0.24
SRSF1-202ENST00000578430 FAM237BA0A1B0GVD1 139 aa13.53□□□□□ -0.24
SRSF1-202ENST00000578430 TTC24A2A3L6 582 aaPredicted RBP13.53□□□□□ -0.24
SRSF1-202ENST00000578430 FZD6O60353 706 aa13.53□□□□□ -0.24
SRSF1-202ENST00000578430 POLBP06746 335 aa13.53□□□□□ -0.24
SRSF1-202ENST00000578430 ATXN1LP0C7T5 689 aaKnown RBP13.53□□□□□ -0.24
SRSF1-202ENST00000578430 PGAM1P18669 254 aa13.53□□□□□ -0.24
SRSF1-202ENST00000578430 ADRA1DP25100 572 aa13.53□□□□□ -0.24
SRSF1-202ENST00000578430 GRIA4P48058 902 aa13.53□□□□□ -0.24
SRSF1-202ENST00000578430 MESP2Q0VG99 397 aa13.53□□□□□ -0.24
SRSF1-202ENST00000578430 TRAF2Q12933 501 aa13.53□□□□□ -0.24
SRSF1-202ENST00000578430 FRG1Q14331 258 aaKnown RBP13.53□□□□□ -0.24
SRSF1-202ENST00000578430 ZNF234Q14588 700 aa13.53□□□□□ -0.24
SRSF1-202ENST00000578430 FASTKD3Q14CZ7 662 aaKnown RBP13.53□□□□□ -0.24
SRSF1-202ENST00000578430 HNRNPA1L2Q32P51 320 aaKnown RBP13.53□□□□□ -0.24
SRSF1-202ENST00000578430 SIRPB2Q5JXA9 342 aa13.53□□□□□ -0.24
SRSF1-202ENST00000578430 STEAP4Q687X5 459 aa13.53□□□□□ -0.24
SRSF1-202ENST00000578430 CASC4Q6P4E1 433 aa13.53□□□□□ -0.24
SRSF1-202ENST00000578430 ZNF449Q6P9G9 518 aa13.53□□□□□ -0.24
SRSF1-202ENST00000578430 DPY19L3Q6ZPD9 716 aa13.53□□□□□ -0.24
SRSF1-202ENST00000578430 Q6ZVU0 165 aa13.53□□□□□ -0.24
SRSF1-202ENST00000578430 NLRP9Q7RTR0 991 aa13.53□□□□□ -0.24
SRSF1-202ENST00000578430 CROCCP2Q86T23 111 aa13.53□□□□□ -0.24
SRSF1-202ENST00000578430 RNF135Q8IUD6 432 aa13.53□□□□□ -0.24
SRSF1-202ENST00000578430 ANKMY2Q8IV38 441 aa13.53□□□□□ -0.24
SRSF1-202ENST00000578430 NDUFAF2Q8N183 169 aa13.53□□□□□ -0.24
SRSF1-202ENST00000578430 AGGF1Q8N302 714 aaeCLIP13.53□□□□□ -0.24
SRSF1-202ENST00000578430 RYBPQ8N488 228 aaPredicted RBP13.53□□□□□ -0.24
SRSF1-202ENST00000578430 PPHLN1Q8NEY8 458 aaKnown RBP13.53□□□□□ -0.24
SRSF1-202ENST00000578430 OR2A12Q8NGT7 310 aa13.53□□□□□ -0.24
SRSF1-202ENST00000578430 HCAR2Q8TDS4 363 aa13.53□□□□□ -0.24
SRSF1-202ENST00000578430 PEX13Q92968 403 aa13.53□□□□□ -0.24
SRSF1-202ENST00000578430 HEPHQ9BQS7 1158 aa13.53□□□□□ -0.24
SRSF1-202ENST00000578430 KIFC1Q9BW19 673 aa13.53□□□□□ -0.24
SRSF1-202ENST00000578430 EPB41L4BQ9H329 900 aa13.53□□□□□ -0.24
SRSF1-202ENST00000578430 TMEM245Q9H330 911 aa13.53□□□□□ -0.24
SRSF1-202ENST00000578430 PPCSQ9HAB8 311 aa13.53□□□□□ -0.24
SRSF1-202ENST00000578430 LRRC4CQ9HCJ2 640 aa13.53□□□□□ -0.24
SRSF1-202ENST00000578430 ZNF446Q9NWS9 450 aa13.53□□□□□ -0.24
SRSF1-202ENST00000578430 SYBUQ9NX95 663 aa13.53□□□□□ -0.24
SRSF1-202ENST00000578430 HACD3Q9P035 362 aa13.53□□□□□ -0.24
SRSF1-202ENST00000578430 SOX13Q9UN79 622 aa13.53□□□□□ -0.24
SRSF1-202ENST00000578430 CHKBQ9Y259 395 aa13.53□□□□□ -0.24
SRSF1-202ENST00000578430 PCDHGC4Q9Y5F7 938 aa13.53□□□□□ -0.24
SRSF1-202ENST00000578430 COL4A2P08572 1712 aa13.53□□□□□ -0.24
SRSF1-202ENST00000578430 MIA3Q5JRA6 1907 aa13.52□□□□□ -0.24
SRSF1-202ENST00000578430 HEATR9A2RTY3 570 aa13.52□□□□□ -0.25
SRSF1-202ENST00000578430 TTC34A8MYJ7 566 aa13.52□□□□□ -0.25
SRSF1-202ENST00000578430 TRAFD1O14545 582 aaPredicted RBP13.52□□□□□ -0.25
SRSF1-202ENST00000578430 BANF1O75531 89 aa13.52□□□□□ -0.25
SRSF1-202ENST00000578430 GJB3O75712 270 aa13.52□□□□□ -0.25
SRSF1-202ENST00000578430 PGLSO95336 258 aa13.52□□□□□ -0.25
SRSF1-202ENST00000578430 PAPSS2O95340 614 aaPredicted RBP13.52□□□□□ -0.25
SRSF1-202ENST00000578430 ACSL3O95573 720 aa13.52□□□□□ -0.25
SRSF1-202ENST00000578430 PRLP01236 227 aa13.52□□□□□ -0.25
SRSF1-202ENST00000578430 IL9P15248 144 aa13.52□□□□□ -0.25
SRSF1-202ENST00000578430 NFKBIAP25963 317 aa13.52□□□□□ -0.25
SRSF1-202ENST00000578430 STX2P32856 288 aa13.52□□□□□ -0.25
SRSF1-202ENST00000578430 SOX9P48436 509 aa13.52□□□□□ -0.25
SRSF1-202ENST00000578430 GRSF1Q12849 480 aaKnown RBP eCLIP13.52□□□□□ -0.25
SRSF1-202ENST00000578430 OLIG2Q13516 323 aa13.52□□□□□ -0.25
SRSF1-202ENST00000578430 ENPP2Q13822 863 aa13.52□□□□□ -0.25
SRSF1-202ENST00000578430 SLC29A2Q14542 456 aa13.52□□□□□ -0.25
SRSF1-202ENST00000578430 STAT4Q14765 748 aa13.52□□□□□ -0.25
SRSF1-202ENST00000578430 TMEM196Q5HYL7 178 aa13.52□□□□□ -0.25
SRSF1-202ENST00000578430 SPANXN3Q5MJ09 141 aa13.52□□□□□ -0.25
SRSF1-202ENST00000578430 CERCAMQ5T4B2 595 aa13.52□□□□□ -0.25
SRSF1-202ENST00000578430 SERPINA13PQ6UXR4 307 aa13.52□□□□□ -0.25
SRSF1-202ENST00000578430 C3orf62Q6ZUJ4 267 aa13.52□□□□□ -0.25
SRSF1-202ENST00000578430 TRMT11Q7Z4G4 463 aaKnown RBP13.52□□□□□ -0.25
SRSF1-202ENST00000578430 TMEM135Q86UB9 458 aa13.52□□□□□ -0.25
SRSF1-202ENST00000578430 CNPY4Q8N129 248 aa13.52□□□□□ -0.25
SRSF1-202ENST00000578430 SLC25A41Q8N5S1 370 aa13.52□□□□□ -0.25
SRSF1-202ENST00000578430 PTPRN2Q92932 1015 aa13.52□□□□□ -0.25
SRSF1-202ENST00000578430 RMDN1Q96DB5 314 aa13.52□□□□□ -0.25
SRSF1-202ENST00000578430 ECHDC3Q96DC8 303 aa13.52□□□□□ -0.25
SRSF1-202ENST00000578430 NSMCE3Q96MG7 304 aa13.52□□□□□ -0.25
SRSF1-202ENST00000578430 RUFY1Q96T51 708 aa13.52□□□□□ -0.25
SRSF1-202ENST00000578430 WDR83Q9BRX9 315 aaKnown RBP13.52□□□□□ -0.25
SRSF1-202ENST00000578430 LRFN3Q9BTN0 628 aa13.52□□□□□ -0.25
SRSF1-202ENST00000578430 TRABDQ9H4I3 376 aa13.52□□□□□ -0.25
SRSF1-202ENST00000578430 SUV39H2Q9H5I1 410 aa13.52□□□□□ -0.25
SRSF1-202ENST00000578430 VPS37BQ9H9H4 285 aa13.52□□□□□ -0.25
SRSF1-202ENST00000578430 RIMKLBQ9ULI2 386 aa13.52□□□□□ -0.25
SRSF1-202ENST00000578430 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.52□□□□□ -0.25
SRSF1-202ENST00000578430 ANKRD66B4E2M5 251 aa13.51□□□□□ -0.25
SRSF1-202ENST00000578430 MAN2B1O00754 1011 aa13.51□□□□□ -0.25
SRSF1-202ENST00000578430 TCEA3O75764 348 aa13.51□□□□□ -0.25
SRSF1-202ENST00000578430 USP1O94782 785 aa13.51□□□□□ -0.25
SRSF1-202ENST00000578430 PRNPP04156 253 aa13.51□□□□□ -0.25
SRSF1-202ENST00000578430 ASGR2P07307 311 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms