RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 TAS2R14Q9NYV8 317 aa14.65□□□□□ -0.06
SMARCE1-213ENST00000578044 IPO11Q9UI26 975 aaKnown RBP14.65□□□□□ -0.06
SMARCE1-213ENST00000578044 U3KQA8 63 aa14.65□□□□□ -0.06
SMARCE1-213ENST00000578044 KALRNO60229 2985 aa14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 EEF2KO00418 725 aaKnown RBP14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 PRPSAP2O60256 369 aa14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 TCEA3O75764 348 aa14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 MT-CO3P00414 261 aa14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 FTLP02792 175 aaPredicted RBP14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 JUNDP17535 347 aa14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 GKP32189 559 aa14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 ACTN2P35609 894 aa14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 EIF2S3P41091 472 aaKnown RBP14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 RPIAP49247 311 aa14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 RENBPP51606 427 aa14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 THOP1P52888 689 aa14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 IL10RBQ08334 325 aa14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 EIF2B5Q13144 721 aaKnown RBP14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 IQCB1Q15051 598 aa14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 ASIC2Q16515 512 aa14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 DPYSL2Q16555 572 aa14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 CCDC157Q569K6 752 aa14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 ERAP2Q6P179 960 aa14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 RFX8Q6ZV50 586 aa14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 CYP4V2Q6ZWL3 525 aaPredicted RBP14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 ZNF571Q7Z3V5 609 aaPredicted RBP14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 PDZD3Q86UT5 571 aa14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 LRRC49Q8IUZ0 686 aa14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 FSTL5Q8N475 847 aaPredicted RBP14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 ARFGAP1Q8N6T3 406 aa14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 NIPA2Q8N8Q9 360 aa14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 LSM14AQ8ND56 463 aaKnown RBP14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 OR6K2Q8NGY2 324 aa14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 ATL2Q8NHH9 583 aa14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 NAT6Q93015 286 aa14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 DEPDC7Q96QD5 511 aa14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 PSKH2Q96QS6 385 aa14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 MYOCQ99972 504 aa14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 FUCA2Q9BTY2 467 aa14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 HAUS4Q9H6D7 363 aa14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 ATP13A3Q9H7F0 1226 aa14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 LRP4O75096 1905 aa14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 ARHGEF17Q96PE2 2063 aaPredicted RBP14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 UNC13CQ8NB66 2214 aa14.64□□□□□ -0.07
SMARCE1-213ENST00000578044 MGAQ8IWI9 3026 aa14.63□□□□□ -0.07
SMARCE1-213ENST00000578044 AHCTF1Q8WYP5 2266 aa14.63□□□□□ -0.07
SMARCE1-213ENST00000578044 LRCH4O75427 683 aa14.63□□□□□ -0.07
SMARCE1-213ENST00000578044 SERPINA4P29622 427 aa14.63□□□□□ -0.07
SMARCE1-213ENST00000578044 MIPP30301 263 aa14.63□□□□□ -0.07
SMARCE1-213ENST00000578044 IGFALSP35858 605 aa14.63□□□□□ -0.07
SMARCE1-213ENST00000578044 MMP12P39900 470 aa14.63□□□□□ -0.07
SMARCE1-213ENST00000578044 ERVPABLB-1P60509 514 aa14.63□□□□□ -0.07
SMARCE1-213ENST00000578044 AP1S1P61966 158 aa14.63□□□□□ -0.07
SMARCE1-213ENST00000578044 KLHL30Q0D2K2 578 aa14.63□□□□□ -0.07
SMARCE1-213ENST00000578044 DPYSQ14117 519 aa14.63□□□□□ -0.07
SMARCE1-213ENST00000578044 LRRC14Q15048 493 aa14.63□□□□□ -0.07
SMARCE1-213ENST00000578044 ZNF354CQ86Y25 554 aa14.63□□□□□ -0.07
SMARCE1-213ENST00000578044 ARHGAP12Q8IWW6 846 aa14.63□□□□□ -0.07
SMARCE1-213ENST00000578044 TEKT4Q8WW24 435 aa14.63□□□□□ -0.07
SMARCE1-213ENST00000578044 FGF11Q92914 225 aa14.63□□□□□ -0.07
SMARCE1-213ENST00000578044 ZNF578Q96N58 590 aaPredicted RBP14.63□□□□□ -0.07
SMARCE1-213ENST00000578044 SNRNP25Q9BV90 132 aaKnown RBP14.63□□□□□ -0.07
SMARCE1-213ENST00000578044 DHX35Q9H5Z1 703 aaKnown RBP14.63□□□□□ -0.07
SMARCE1-213ENST00000578044 RCOR3Q9P2K3 495 aaPredicted RBP14.63□□□□□ -0.07
SMARCE1-213ENST00000578044 KLF15Q9UIH9 416 aa14.63□□□□□ -0.07
SMARCE1-213ENST00000578044 ATP8A1Q9Y2Q0 1164 aa14.63□□□□□ -0.07
SMARCE1-213ENST00000578044 COL27A1Q8IZC6 1860 aaPredicted RBP14.63□□□□□ -0.07
SMARCE1-213ENST00000578044 SHROOM3Q8TF72 1996 aa14.62□□□□□ -0.07
SMARCE1-213ENST00000578044 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.62□□□□□ -0.07
SMARCE1-213ENST00000578044 DDX3XO00571 662 aaKnown RBP eCLIP14.62□□□□□ -0.073e-10■■■■□ 24
SMARCE1-213ENST00000578044 RRP8O43159 456 aaKnown RBP14.62□□□□□ -0.07
SMARCE1-213ENST00000578044 ALPIP09923 528 aa14.62□□□□□ -0.07
SMARCE1-213ENST00000578044 ERCC2P18074 760 aa14.62□□□□□ -0.07
SMARCE1-213ENST00000578044 XPAP23025 273 aaPredicted RBP14.62□□□□□ -0.07
SMARCE1-213ENST00000578044 HTR1BP28222 390 aa14.62□□□□□ -0.07
SMARCE1-213ENST00000578044 LSSP48449 732 aa14.62□□□□□ -0.07
SMARCE1-213ENST00000578044 PAPOLAP51003 745 aaKnown RBP14.62□□□□□ -0.07
SMARCE1-213ENST00000578044 MTM1Q13496 603 aa14.62□□□□□ -0.07
SMARCE1-213ENST00000578044 PIGHQ14442 188 aaPredicted RBP14.62□□□□□ -0.07
SMARCE1-213ENST00000578044 KLHL40Q2TBA0 621 aa14.62□□□□□ -0.07
SMARCE1-213ENST00000578044 COL28A1Q2UY09 1125 aa14.62□□□□□ -0.07
SMARCE1-213ENST00000578044 TBC1D25Q3MII6 688 aa14.62□□□□□ -0.07
SMARCE1-213ENST00000578044 C6orf132Q5T0Z8 1188 aa14.62□□□□□ -0.07
SMARCE1-213ENST00000578044 SRLQ86TD4 932 aa14.62□□□□□ -0.07
SMARCE1-213ENST00000578044 OR6C4Q8NGE1 309 aa14.62□□□□□ -0.07
SMARCE1-213ENST00000578044 IL12RB2Q99665 862 aa14.62□□□□□ -0.07
SMARCE1-213ENST00000578044 SLC13A1Q9BZW2 595 aa14.62□□□□□ -0.07
SMARCE1-213ENST00000578044 SLC39A8Q9C0K1 460 aa14.62□□□□□ -0.07
SMARCE1-213ENST00000578044 ZWILCHQ9H900 591 aa14.62□□□□□ -0.07
SMARCE1-213ENST00000578044 CNOT8Q9UFF9 292 aaKnown RBP14.62□□□□□ -0.07
SMARCE1-213ENST00000578044 SEPT3Q9UH03 358 aa14.62□□□□□ -0.07
SMARCE1-213ENST00000578044 APOBEC3BQ9UH17 382 aaKnown RBP14.62□□□□□ -0.07
SMARCE1-213ENST00000578044 GGT7Q9UJ14 662 aa14.62□□□□□ -0.07
SMARCE1-213ENST00000578044 ITM2BQ9Y287 266 aa14.62□□□□□ -0.07
SMARCE1-213ENST00000578044 DGKBQ9Y6T7 804 aa14.62□□□□□ -0.07
SMARCE1-213ENST00000578044 FAM170AA1A519 330 aa14.61□□□□□ -0.07
SMARCE1-213ENST00000578044 J3KR12 359 aa14.61□□□□□ -0.07
SMARCE1-213ENST00000578044 TK2O00142 265 aa14.61□□□□□ -0.07
SMARCE1-213ENST00000578044 TRAFD1O14545 582 aaPredicted RBP14.61□□□□□ -0.07
SMARCE1-213ENST00000578044 TNFRSF10CO14798 259 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms