RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 PPP1R3GB7ZBB8 358 aa13.5□□□□□ -0.25
COPS3-214ENST00000577246 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.5□□□□□ -0.25
COPS3-214ENST00000577246 STMND1H3BQB6 276 aa13.5□□□□□ -0.25
COPS3-214ENST00000577246 RAMP2O60895 175 aa13.5□□□□□ -0.25
COPS3-214ENST00000577246 CD160O95971 181 aa13.5□□□□□ -0.25
COPS3-214ENST00000577246 IGSF6O95976 241 aa13.5□□□□□ -0.25
COPS3-214ENST00000577246 TNFP01375 233 aa13.5□□□□□ -0.25
COPS3-214ENST00000577246 CELA2BP08218 269 aaPredicted RBP13.5□□□□□ -0.25
COPS3-214ENST00000577246 RHOQP17081 205 aa13.5□□□□□ -0.25
COPS3-214ENST00000577246 ITIH1P19827 911 aa13.5□□□□□ -0.25
COPS3-214ENST00000577246 GABRB2P47870 512 aa13.5□□□□□ -0.25
COPS3-214ENST00000577246 MAPK10P53779 464 aa13.5□□□□□ -0.25
COPS3-214ENST00000577246 NRG1Q02297 640 aaPredicted RBP13.5□□□□□ -0.25
COPS3-214ENST00000577246 ARHGEF7Q14155 803 aa13.5□□□□□ -0.25
COPS3-214ENST00000577246 CERCAMQ5T4B2 595 aa13.5□□□□□ -0.25
COPS3-214ENST00000577246 RWDD4Q6NW29 188 aaKnown RBP13.5□□□□□ -0.25
COPS3-214ENST00000577246 BORAQ6PGQ7 559 aa13.5□□□□□ -0.25
COPS3-214ENST00000577246 RD3Q7Z3Z2 195 aa13.5□□□□□ -0.25
COPS3-214ENST00000577246 VASH2Q86V25 355 aa13.5□□□□□ -0.25
COPS3-214ENST00000577246 FAM131BQ86XD5 332 aa13.5□□□□□ -0.25
COPS3-214ENST00000577246 DTX1Q86Y01 620 aa13.5□□□□□ -0.25
COPS3-214ENST00000577246 LURAP1LQ8IV03 231 aa13.5□□□□□ -0.25
COPS3-214ENST00000577246 Q8N9G6 341 aaPredicted RBP13.5□□□□□ -0.25
COPS3-214ENST00000577246 GPR156Q8NFN8 814 aa13.5□□□□□ -0.25
COPS3-214ENST00000577246 USP7Q93009 1102 aa13.5□□□□□ -0.25
COPS3-214ENST00000577246 TSACCQ96A04 125 aaPredicted RBP13.5□□□□□ -0.25
COPS3-214ENST00000577246 WDR92Q96MX6 357 aa13.5□□□□□ -0.25
COPS3-214ENST00000577246 RBM15Q96T37 977 aaKnown RBP eCLIP13.5□□□□□ -0.25
COPS3-214ENST00000577246 WRAP53Q9BUR4 548 aaKnown RBP13.5□□□□□ -0.25
COPS3-214ENST00000577246 TMPRSS4Q9NRS4 437 aa13.5□□□□□ -0.25
COPS3-214ENST00000577246 TUBD1Q9UJT1 453 aa13.5□□□□□ -0.25
COPS3-214ENST00000577246 GP1BBP13224 206 aa13.49□□□□□ -0.25
COPS3-214ENST00000577246 SLC9A1P19634 815 aa13.49□□□□□ -0.25
COPS3-214ENST00000577246 ACVRL1P37023 503 aa13.49□□□□□ -0.25
COPS3-214ENST00000577246 C1QBPQ07021 282 aaKnown RBP13.49□□□□□ -0.25
COPS3-214ENST00000577246 SRSF6Q13247 344 aaKnown RBP13.49□□□□□ -0.25
COPS3-214ENST00000577246 UBAP2LQ14157 1087 aaKnown RBP13.49□□□□□ -0.25
COPS3-214ENST00000577246 GRM3Q14832 879 aa13.49□□□□□ -0.25
COPS3-214ENST00000577246 CLPPQ16740 277 aaPredicted RBP13.49□□□□□ -0.25
COPS3-214ENST00000577246 MAP9Q49MG5 647 aa13.49□□□□□ -0.25
COPS3-214ENST00000577246 TMEM52BQ4KMG9 183 aa13.49□□□□□ -0.25
COPS3-214ENST00000577246 LRRC73Q5JTD7 316 aa13.49□□□□□ -0.25
COPS3-214ENST00000577246 PHF19Q5T6S3 580 aa13.49□□□□□ -0.25
COPS3-214ENST00000577246 ERAP2Q6P179 960 aa13.49□□□□□ -0.25
COPS3-214ENST00000577246 ARCQ7LC44 396 aa13.49□□□□□ -0.25
COPS3-214ENST00000577246 SPRED1Q7Z699 444 aa13.49□□□□□ -0.25
COPS3-214ENST00000577246 SLC47A2Q86VL8 602 aa13.49□□□□□ -0.25
COPS3-214ENST00000577246 ZFAND4Q86XD8 727 aa13.49□□□□□ -0.25
COPS3-214ENST00000577246 ZNF564Q8TBZ8 553 aaPredicted RBP13.49□□□□□ -0.25
COPS3-214ENST00000577246 HCAR2Q8TDS4 363 aa13.49□□□□□ -0.25
COPS3-214ENST00000577246 NCAPGQ9BPX3 1015 aa13.49□□□□□ -0.25
COPS3-214ENST00000577246 FUCA2Q9BTY2 467 aa13.49□□□□□ -0.25
COPS3-214ENST00000577246 APOOQ9BUR5 198 aa13.49□□□□□ -0.25
COPS3-214ENST00000577246 TTYH3Q9C0H2 523 aa13.49□□□□□ -0.25
COPS3-214ENST00000577246 TMEM248Q9NWD8 314 aa13.49□□□□□ -0.25
COPS3-214ENST00000577246 FOXJ2Q9P0K8 574 aa13.49□□□□□ -0.25
COPS3-214ENST00000577246 OR12D3Q9UGF7 316 aa13.49□□□□□ -0.25
COPS3-214ENST00000577246 MFHAS1Q9Y4C4 1052 aa13.49□□□□□ -0.25
COPS3-214ENST00000577246 ACTL7AQ9Y615 435 aa13.49□□□□□ -0.25
COPS3-214ENST00000577246 DGKBQ9Y6T7 804 aa13.49□□□□□ -0.25
COPS3-214ENST00000577246 RNF215Q9Y6U7 377 aa13.49□□□□□ -0.25
COPS3-214ENST00000577246 BUB1O43683 1085 aa13.48□□□□□ -0.25
COPS3-214ENST00000577246 NUDT21O43809 227 aaKnown RBP13.48□□□□□ -0.25
COPS3-214ENST00000577246 LSM8O95777 96 aaKnown RBP13.48□□□□□ -0.25
COPS3-214ENST00000577246 KELP23276 732 aa13.48□□□□□ -0.25
COPS3-214ENST00000577246 CDH5P33151 784 aaPredicted RBP13.48□□□□□ -0.25
COPS3-214ENST00000577246 FLT3P36888 993 aa13.48□□□□□ -0.25
COPS3-214ENST00000577246 STX17P56962 302 aa13.48□□□□□ -0.25
COPS3-214ENST00000577246 RHOAP61586 193 aa13.48□□□□□ -0.25
COPS3-214ENST00000577246 MTM1Q13496 603 aa13.48□□□□□ -0.25
COPS3-214ENST00000577246 INPP5AQ14642 412 aa13.48□□□□□ -0.25
COPS3-214ENST00000577246 TCEA2Q15560 299 aa13.48□□□□□ -0.25
COPS3-214ENST00000577246 WSCD2Q2TBF2 565 aa13.48□□□□□ -0.25
COPS3-214ENST00000577246 C14orf28Q4W4Y0 310 aa13.48□□□□□ -0.25
COPS3-214ENST00000577246 INO80DQ53TQ3 878 aaPredicted RBP13.48□□□□□ -0.25
COPS3-214ENST00000577246 CFAP58Q5T655 872 aa13.48□□□□□ -0.25
COPS3-214ENST00000577246 ATXN7L2Q5T6C5 722 aaPredicted RBP13.48□□□□□ -0.25
COPS3-214ENST00000577246 OGFOD3Q6PK18 319 aa13.48□□□□□ -0.25
COPS3-214ENST00000577246 BNIPLQ7Z465 357 aa13.48□□□□□ -0.25
COPS3-214ENST00000577246 TAF8Q7Z7C8 310 aa13.48□□□□□ -0.25
COPS3-214ENST00000577246 PIM3Q86V86 326 aa13.48□□□□□ -0.25
COPS3-214ENST00000577246 ZNF354CQ86Y25 554 aa13.48□□□□□ -0.25
COPS3-214ENST00000577246 XYLT1Q86Y38 959 aa13.48□□□□□ -0.25
COPS3-214ENST00000577246 CREBRFQ8IUR6 639 aa13.48□□□□□ -0.25
COPS3-214ENST00000577246 CCDC112Q8NEF3 446 aa13.48□□□□□ -0.25
COPS3-214ENST00000577246 FAM46DQ8NEK8 389 aa13.48□□□□□ -0.25
COPS3-214ENST00000577246 KIAA1524Q8TCG1 905 aa13.48□□□□□ -0.25
COPS3-214ENST00000577246 GPBAR1Q8TDU6 330 aa13.48□□□□□ -0.25
COPS3-214ENST00000577246 CFAP57Q96MR6 1250 aa13.48□□□□□ -0.25
COPS3-214ENST00000577246 CATSPER2Q96P56 530 aa13.48□□□□□ -0.25
COPS3-214ENST00000577246 PLCB1Q9NQ66 1216 aa13.48□□□□□ -0.25
COPS3-214ENST00000577246 LRIT1Q9P2V4 623 aa13.48□□□□□ -0.25
COPS3-214ENST00000577246 DNAI1Q9UI46 699 aa13.48□□□□□ -0.25
COPS3-214ENST00000577246 BOD1L1Q8NFC6 3051 aa13.47□□□□□ -0.25
COPS3-214ENST00000577246 C9orf172C9J069 976 aa13.47□□□□□ -0.25
COPS3-214ENST00000577246 CACNB4O00305 520 aaPredicted RBP13.47□□□□□ -0.25
COPS3-214ENST00000577246 HGSO14964 777 aaPredicted RBP13.47□□□□□ -0.25
COPS3-214ENST00000577246 KDELR3O43731 214 aa13.47□□□□□ -0.25
COPS3-214ENST00000577246 TMCC1O94876 653 aa13.47□□□□□ -0.25
COPS3-214ENST00000577246 CPNE6O95741 557 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms