RNA–Protein interactions for RNA: ENST00000575830.2

CDC27-218, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-218ENST00000575830 PDLIM4P50479 330 aa3.36□□□□□ -1.87
CDC27-218ENST00000575830 TUBP50607 506 aa3.36□□□□□ -1.87
CDC27-218ENST00000575830 BRWD1-AS2P59051 145 aa3.36□□□□□ -1.87
CDC27-218ENST00000575830 ECT2LQ008S8 904 aa3.36□□□□□ -1.87
CDC27-218ENST00000575830 GAGE1Q13065 139 aa3.36□□□□□ -1.87
CDC27-218ENST00000575830 GAGE4Q13068 117 aa3.36□□□□□ -1.87
CDC27-218ENST00000575830 EDRF1Q3B7T1 1238 aa3.36□□□□□ -1.87
CDC27-218ENST00000575830 SETMARQ53H47 684 aaPredicted RBP3.36□□□□□ -1.87
CDC27-218ENST00000575830 SLC9C2Q5TAH2 1124 aa3.36□□□□□ -1.87
CDC27-218ENST00000575830 TMEM81Q6P7N7 255 aa3.36□□□□□ -1.87
CDC27-218ENST00000575830 C18orf65Q6ZTR6 163 aa3.36□□□□□ -1.87
CDC27-218ENST00000575830 C16orf82Q7Z2V1 217 aa3.36□□□□□ -1.87
CDC27-218ENST00000575830 ARMC9Q7Z3E5 817 aa3.36□□□□□ -1.87
CDC27-218ENST00000575830 TADA2BQ86TJ2 420 aa3.36□□□□□ -1.87
CDC27-218ENST00000575830 TBC1D26Q86UD7 250 aa3.36□□□□□ -1.87
CDC27-218ENST00000575830 MB21D2Q8IYB1 491 aaPredicted RBP3.36□□□□□ -1.87
CDC27-218ENST00000575830 TCP11L2Q8N4U5 519 aa3.36□□□□□ -1.87
CDC27-218ENST00000575830 TSPYL6Q8N831 410 aa3.36□□□□□ -1.87
CDC27-218ENST00000575830 OR14A16Q8NHC5 309 aa3.36□□□□□ -1.87
CDC27-218ENST00000575830 WASF1Q92558 559 aa3.36□□□□□ -1.87
CDC27-218ENST00000575830 HVCN1Q96D96 273 aa3.36□□□□□ -1.87
CDC27-218ENST00000575830 MED30Q96HR3 178 aa3.36□□□□□ -1.87
CDC27-218ENST00000575830 LRFN5Q96NI6 719 aa3.36□□□□□ -1.87
CDC27-218ENST00000575830 AGXT2Q9BYV1 514 aa3.36□□□□□ -1.87
CDC27-218ENST00000575830 SPRY4Q9C004 299 aa3.36□□□□□ -1.87
CDC27-218ENST00000575830 DDX31Q9H8H2 851 aaKnown RBP3.36□□□□□ -1.87
CDC27-218ENST00000575830 SNTG1Q9NSN8 517 aa3.36□□□□□ -1.87
CDC27-218ENST00000575830 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.36□□□□□ -1.87
CDC27-218ENST00000575830 KDM3AQ9Y4C1 1321 aa3.36□□□□□ -1.87
CDC27-218ENST00000575830 ACOT8O14734 319 aa3.35□□□□□ -1.87
CDC27-218ENST00000575830 HSPA12AO43301 675 aa3.35□□□□□ -1.87
CDC27-218ENST00000575830 KCNJ13O60928 360 aa3.35□□□□□ -1.87
CDC27-218ENST00000575830 NDUFB4O95168 129 aa3.35□□□□□ -1.87
CDC27-218ENST00000575830 F9P00740 461 aa3.35□□□□□ -1.87
CDC27-218ENST00000575830 GALTP07902 379 aa3.35□□□□□ -1.87
CDC27-218ENST00000575830 HNRNPA1P09651 372 aaKnown RBP eCLIP3.35□□□□□ -1.87
CDC27-218ENST00000575830 IFIT1P09914 478 aaKnown RBP3.35□□□□□ -1.87
CDC27-218ENST00000575830 COX7A2P14406 83 aa3.35□□□□□ -1.87
CDC27-218ENST00000575830 SLC2A4P14672 509 aa3.35□□□□□ -1.87
CDC27-218ENST00000575830 GPTP24298 496 aa3.35□□□□□ -1.87
CDC27-218ENST00000575830 ITGB8P26012 769 aa3.35□□□□□ -1.87
CDC27-218ENST00000575830 PPM1FP49593 454 aaPredicted RBP3.35□□□□□ -1.87
CDC27-218ENST00000575830 TUBA1BP68363 451 aa3.35□□□□□ -1.87
CDC27-218ENST00000575830 ASIC2Q16515 512 aa3.35□□□□□ -1.87
CDC27-218ENST00000575830 NFIL3Q16649 462 aa3.35□□□□□ -1.87
CDC27-218ENST00000575830 ZNF585BQ52M93 769 aa3.35□□□□□ -1.87
CDC27-218ENST00000575830 PRAMEF19Q5SWL8 479 aa3.35□□□□□ -1.87
CDC27-218ENST00000575830 NADSYN1Q6IA69 706 aa3.35□□□□□ -1.87
CDC27-218ENST00000575830 KLHL24Q6TFL4 600 aa3.35□□□□□ -1.87
CDC27-218ENST00000575830 NEK10Q6ZWH5 1172 aa3.35□□□□□ -1.87
CDC27-218ENST00000575830 PALB2Q86YC2 1186 aa3.35□□□□□ -1.87
CDC27-218ENST00000575830 EXOC8Q8IYI6 725 aa3.35□□□□□ -1.87
CDC27-218ENST00000575830 MIGA1Q8NAN2 632 aa3.35□□□□□ -1.87
CDC27-218ENST00000575830 GJC3Q8NFK1 279 aa3.35□□□□□ -1.87
CDC27-218ENST00000575830 LMO3Q8TAP4 145 aa3.35□□□□□ -1.87
CDC27-218ENST00000575830 ARRDC2Q8TBH0 407 aa3.35□□□□□ -1.87
CDC27-218ENST00000575830 APOPT1Q96IL0 206 aa3.35□□□□□ -1.87
CDC27-218ENST00000575830 PSMD1Q99460 953 aa3.35□□□□□ -1.87
CDC27-218ENST00000575830 SLCO5A1Q9H2Y9 848 aa3.35□□□□□ -1.87
CDC27-218ENST00000575830 DDX4Q9NQI0 724 aaKnown RBP3.35□□□□□ -1.87
CDC27-218ENST00000575830 SMYD2Q9NRG4 433 aa3.35□□□□□ -1.87
CDC27-218ENST00000575830 CYSLTR2Q9NS75 346 aa3.35□□□□□ -1.87
CDC27-218ENST00000575830 C20orf141Q9NUB4 165 aa3.35□□□□□ -1.87
CDC27-218ENST00000575830 IL1RAPL1Q9NZN1 696 aa3.35□□□□□ -1.87
CDC27-218ENST00000575830 OR6C3Q9NZP0 311 aa3.35□□□□□ -1.87
CDC27-218ENST00000575830 CARD8Q9Y2G2 431 aa3.35□□□□□ -1.87
CDC27-218ENST00000575830 NOTCH4Q99466 2003 aa3.35□□□□□ -1.87
CDC27-218ENST00000575830 LOC102724159A0A0B4J2E5 919 aa3.34□□□□□ -1.87
CDC27-218ENST00000575830 KDM4EB2RXH2 506 aaPredicted RBP3.34□□□□□ -1.87
CDC27-218ENST00000575830 NPIPB11E5RHQ5 1161 aa3.34□□□□□ -1.87
CDC27-218ENST00000575830 LDLRAD4O15165 306 aa3.34□□□□□ -1.87
CDC27-218ENST00000575830 TNFSF14O43557 240 aa3.34□□□□□ -1.87
CDC27-218ENST00000575830 PRSS2P07478 247 aa3.34□□□□□ -1.87
CDC27-218ENST00000575830 HOXB5P09067 269 aa3.34□□□□□ -1.87
CDC27-218ENST00000575830 IGHV4-30-4P0DP06 118 aa3.34□□□□□ -1.87
CDC27-218ENST00000575830 PCNAP12004 261 aa3.34□□□□□ -1.87
CDC27-218ENST00000575830 EDN2P20800 178 aa3.34□□□□□ -1.87
CDC27-218ENST00000575830 HNRNPH1P31943 449 aaKnown RBP3.34□□□□□ -1.87
CDC27-218ENST00000575830 SHMT1P34896 483 aa3.34□□□□□ -1.87
CDC27-218ENST00000575830 MAPK9P45984 424 aa3.34□□□□□ -1.87
CDC27-218ENST00000575830 GABRB2P47870 512 aa3.34□□□□□ -1.87
CDC27-218ENST00000575830 ART1P52961 327 aa3.34□□□□□ -1.87
CDC27-218ENST00000575830 RAD23BP54727 409 aa3.34□□□□□ -1.87
CDC27-218ENST00000575830 UFM1P61960 85 aa3.34□□□□□ -1.87
CDC27-218ENST00000575830 GRSF1Q12849 480 aaKnown RBP eCLIP3.34□□□□□ -1.87
CDC27-218ENST00000575830 PWP2Q15269 919 aaKnown RBP3.34□□□□□ -1.87
CDC27-218ENST00000575830 RNPS1Q15287 305 aaKnown RBP3.34□□□□□ -1.87
CDC27-218ENST00000575830 TAF11Q15544 211 aa3.34□□□□□ -1.87
CDC27-218ENST00000575830 EFNB3Q15768 340 aa3.34□□□□□ -1.87
CDC27-218ENST00000575830 PPP6R3Q5H9R7 873 aaPredicted RBP3.34□□□□□ -1.87
CDC27-218ENST00000575830 C9orf57Q5W0N0 161 aa3.34□□□□□ -1.87
CDC27-218ENST00000575830 ANKRD54Q6NXT1 300 aa3.34□□□□□ -1.87
CDC27-218ENST00000575830 PRSS57Q6UWY2 283 aa3.34□□□□□ -1.87
CDC27-218ENST00000575830 MTSS1LQ765P7 747 aa3.34□□□□□ -1.87
CDC27-218ENST00000575830 CCDC105Q8IYK2 499 aa3.34□□□□□ -1.87
CDC27-218ENST00000575830 PPM1EQ8WY54 764 aa3.34□□□□□ -1.87
CDC27-218ENST00000575830 ST8SIA4Q92187 359 aa3.34□□□□□ -1.87
CDC27-218ENST00000575830 NR1H4Q96RI1 486 aaPredicted RBP3.34□□□□□ -1.87
CDC27-218ENST00000575830 FIZ1Q96SL8 496 aa3.34□□□□□ -1.87
CDC27-218ENST00000575830 MXRA8Q9BRK3 442 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms