RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 TTI2Q6NXR4 508 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 OGFOD3Q6PK18 319 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 RD3Q7Z3Z2 195 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 PASD1Q8IV76 773 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 DRC7Q8IY82 874 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 FMR1NBQ8N0W7 255 aaPredicted RBP9.1□□□□□ -0.95
SMG6-218ENST00000575454 TP53I13Q8NBR0 393 aaPredicted RBP9.1□□□□□ -0.95
SMG6-218ENST00000575454 CCDC112Q8NEF3 446 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 GPR156Q8NFN8 814 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 OR6K2Q8NGY2 324 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 HCAR2Q8TDS4 363 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 CASKIN2Q8WXE0 1202 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 TSACCQ96A04 125 aaPredicted RBP9.1□□□□□ -0.95
SMG6-218ENST00000575454 GDAP1L1Q96MZ0 367 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 KLHL32Q96NJ5 620 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 RBM15Q96T37 977 aaKnown RBP eCLIP9.1□□□□□ -0.95
SMG6-218ENST00000575454 FUCA2Q9BTY2 467 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 MAGEH1Q9H213 219 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 PDCL3Q9H2J4 239 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 ACP6Q9NPH0 428 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 MBNL1Q9NR56 388 aaKnown RBP9.1□□□□□ -0.95
SMG6-218ENST00000575454 FOXJ2Q9P0K8 574 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 LRIT1Q9P2V4 623 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 APEX2Q9UBZ4 518 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 ZNF212Q9UDV6 495 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 GGT7Q9UJ14 662 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 PNMA8BQ9ULN7 279 aaPredicted RBP9.1□□□□□ -0.95
SMG6-218ENST00000575454 PCDHGA3Q9Y5H0 932 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 SNX10Q9Y5X0 201 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 RNF215Q9Y6U7 377 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 PLXNA2O75051 1894 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 TMEM131Q92545 1883 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 AHCTF1Q8WYP5 2266 aa9.1□□□□□ -0.95
SMG6-218ENST00000575454 C9orf172C9J069 976 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 I6L893 689 aaPredicted RBP9.09□□□□□ -0.95
SMG6-218ENST00000575454 CASC3O15234 703 aaKnown RBP9.09□□□□□ -0.95
SMG6-218ENST00000575454 RAMP2O60895 175 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 CPNE6O95741 557 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 CD160O95971 181 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 IGSF6O95976 241 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 CELA2BP08218 269 aaPredicted RBP9.09□□□□□ -0.95
SMG6-218ENST00000575454 TIMP2P16035 220 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 RHOQP17081 205 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 ITIH1P19827 911 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 GKP32189 559 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 ACVRL1P37023 503 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 POLE2P56282 527 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 CYP4F2P78329 520 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 GRM3Q14832 879 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 NCAPHQ15003 741 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 IRF4Q15306 451 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 ARHGAP44Q17R89 818 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 WSCD2Q2TBF2 565 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 PTPN20Q4JDL3 420 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 TMEM52BQ4KMG9 183 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 C14orf28Q4W4Y0 310 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 C4orf17Q53FE4 359 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 INO80DQ53TQ3 878 aaPredicted RBP9.09□□□□□ -0.95
SMG6-218ENST00000575454 KLHL10Q6JEL2 608 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 ERAP2Q6P179 960 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 TRIM65Q6PJ69 517 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 GBP6Q6ZN66 633 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 SPRED1Q7Z699 444 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 TAF8Q7Z7C8 310 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 PIM3Q86V86 326 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 IRF2BP1Q8IU81 584 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 SLITRK4Q8IW52 837 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 ELOA2Q8IYF1 753 aaPredicted RBP9.09□□□□□ -0.95
SMG6-218ENST00000575454 FAM26EQ8N5C1 309 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 TMEM35BQ8NCS4 154 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 MSANTD4Q8NCY6 345 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 FAM46DQ8NEK8 389 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 KIAA1524Q8TCG1 905 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 NELFBQ8WX92 580 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 HTR3CQ8WXA8 447 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 SHC3Q92529 594 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 TIGD1Q96MW7 591 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 WDR92Q96MX6 357 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 TAAR9Q96RI9 348 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 TBCBQ99426 244 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 APOOQ9BUR5 198 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 SLC12A9Q9BXP2 914 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 ASPSCR1Q9BZE9 553 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 TTYH3Q9C0H2 523 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 CDH19Q9H159 772 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 EPN3Q9H201 632 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 ANLNQ9NQW6 1124 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 MFHAS1Q9Y4C4 1052 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 ITPR3Q14573 2671 aa9.09□□□□□ -0.95
SMG6-218ENST00000575454 BSNQ9UPA5 3926 aa9.08□□□□□ -0.96
SMG6-218ENST00000575454 CFAP69A5D8W1 941 aa9.08□□□□□ -0.96
SMG6-218ENST00000575454 ZNF891A8MT65 544 aaPredicted RBP9.08□□□□□ -0.96
SMG6-218ENST00000575454 BECN2A8MW95 431 aa9.08□□□□□ -0.96
SMG6-218ENST00000575454 CACNB4O00305 520 aaPredicted RBP9.08□□□□□ -0.96
SMG6-218ENST00000575454 PDE2AO00408 941 aaPredicted RBP9.08□□□□□ -0.96
SMG6-218ENST00000575454 TNFRSF10CO14798 259 aa9.08□□□□□ -0.96
SMG6-218ENST00000575454 BUB1O43683 1085 aa9.08□□□□□ -0.96
SMG6-218ENST00000575454 KDELR3O43731 214 aa9.08□□□□□ -0.96
SMG6-218ENST00000575454 HOXC4P09017 264 aaPredicted RBP9.08□□□□□ -0.96
SMG6-218ENST00000575454 GABRB2P47870 512 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms