RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 PIP4K2CQ8TBX8 421 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 SPPL2BQ8TCT7 592 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 USP13Q92995 863 aaPredicted RBP9.02□□□□□ -0.97
NCBP3-204ENST00000574911 DCUN1D1Q96GG9 259 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 UROC1Q96N76 676 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 NPAS2Q99743 824 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 SUDS3Q9H7L9 328 aaPredicted RBP9.02□□□□□ -0.97
NCBP3-204ENST00000574911 UTP6Q9NYH9 597 aaKnown RBP9.02□□□□□ -0.97
NCBP3-204ENST00000574911 GTSE1Q9NYZ3 720 aa9.02□□□□□ -0.97
NCBP3-204ENST00000574911 PTPRDP23468 1912 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 A0A0U1RQF3 1178 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 CAPN8A6NHC0 703 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 A8MT66 165 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 STX16-NPEPL1H3BU86 382 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 ACOT8O14734 319 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 PAPSS2O95340 614 aaPredicted RBP9.01□□□□□ -0.97
NCBP3-204ENST00000574911 WISP3O95389 354 aaPredicted RBP9.01□□□□□ -0.97
NCBP3-204ENST00000574911 ITGB1P05556 798 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 HNRNPLP14866 589 aaKnown RBP eCLIP9.01□□□□□ -0.97
NCBP3-204ENST00000574911 MRPS22P82650 360 aaKnown RBP9.01□□□□□ -0.97
NCBP3-204ENST00000574911 ROR2Q01974 943 aaKnown RBP9.01□□□□□ -0.97
NCBP3-204ENST00000574911 CSHL1Q14406 222 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 PSMD5Q16401 504 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 PCSK7Q16549 785 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 GNASQ5JWF2 1037 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 PIK3R6Q5UE93 754 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 AGAP9Q5VTM2 703 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 C17orf99Q6UX52 265 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 GALNT7Q86SF2 657 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 MFN1Q8IWA4 741 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 UMODL1-AS1Q8N2C9 162 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 MARVELD2Q8N4S9 558 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 CALML6Q8TD86 181 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 DLG3Q92796 817 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 CCDC126Q96EE4 140 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 SLC39A13Q96H72 371 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 SERPINB11Q96P15 392 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 NDNQ99608 321 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 CENPKQ9BS16 269 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 MEAF6Q9HAF1 191 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 NUDT5Q9UKK9 219 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 PRSS51A0A1B0GVH4 220 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 KIF3CO14782 793 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 CELF2O95319 508 aaKnown RBP9.01□□□□□ -0.97
NCBP3-204ENST00000574911 MOCS2O96007 188 aaPredicted RBP9.01□□□□□ -0.97
NCBP3-204ENST00000574911 MMP2P08253 660 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 LTA4HP09960 611 aaKnown RBP9.01□□□□□ -0.97
NCBP3-204ENST00000574911 KCNA5P22460 613 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 MSX2P35548 267 aaPredicted RBP9.01□□□□□ -0.97
NCBP3-204ENST00000574911 GRIA2P42262 883 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 PSMD8P48556 350 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 SERPINH1P50454 418 aaKnown RBP9.01□□□□□ -0.97
NCBP3-204ENST00000574911 CHN2P52757 468 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 NDST2P52849 883 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 CNPY1Q3B7I2 92 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 GK5Q6ZS86 529 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 SPNS2Q8IVW8 549 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 LILRA2Q8N149 483 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 BHLHE22Q8NFJ8 381 aaPredicted RBP9.01□□□□□ -0.97
NCBP3-204ENST00000574911 OR13J1Q8NGT2 312 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 HMGCLL1Q8TB92 370 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 NCSTNQ92542 709 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 TSPAN17Q96FV3 270 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 UBXN10Q96LJ8 280 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 LRGUKQ96M69 825 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 GCNAQ96QF7 691 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 SPATA16Q9BXB7 569 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 EML4Q9HC35 981 aaKnown RBP9.01□□□□□ -0.97
NCBP3-204ENST00000574911 TNFRSF12AQ9NP84 129 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 PRDM5Q9NQX1 630 aaPredicted RBP9.01□□□□□ -0.97
NCBP3-204ENST00000574911 SARDHQ9UL12 918 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 PCDHB8Q9UN66 801 aa9.01□□□□□ -0.97
NCBP3-204ENST00000574911 F8W810 466 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 TRIM38O00635 465 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 DNAJA2O60884 412 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 IPO13O94829 963 aaKnown RBP9□□□□□ -0.97
NCBP3-204ENST00000574911 RBP1P09455 135 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 RENBPP51606 427 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 TNK2Q07912 1038 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 GALNT1Q10472 559 aaPredicted RBP9□□□□□ -0.97
NCBP3-204ENST00000574911 PTK2BQ14289 1009 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 SQLEQ14534 574 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 IHHQ14623 411 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 ACAP2Q15057 778 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 TLR1Q15399 786 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 TAF1CQ15572 869 aaPredicted RBP9□□□□□ -0.97
NCBP3-204ENST00000574911 HECTD2Q5U5R9 776 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 MSANTD2Q6P1R3 559 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 CUZD1Q86UP6 607 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 CATSPER1Q8NEC5 780 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 ADCY4Q8NFM4 1077 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 GABPB2Q8TAK5 448 aaPredicted RBP9□□□□□ -0.97
NCBP3-204ENST00000574911 SOCS4Q8WXH5 440 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 TADA1Q96BN2 335 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 KLHL32Q96NJ5 620 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 MRPL1Q9BYD6 325 aaKnown RBP9□□□□□ -0.97
NCBP3-204ENST00000574911 CYP4F12Q9HCS2 524 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 NT5MQ9NPB1 228 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 MRGBPQ9NV56 204 aa9□□□□□ -0.97
NCBP3-204ENST00000574911 RAB26Q9ULW5 256 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms