RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 ZNF766Q5HY98 468 aa4.92□□□□□ -1.62
CDC27-216ENST00000574304 KLHL24Q6TFL4 600 aa4.92□□□□□ -1.62
CDC27-216ENST00000574304 PRSS57Q6UWY2 283 aa4.92□□□□□ -1.62
CDC27-216ENST00000574304 CCDC129Q6ZRS4 1044 aa4.92□□□□□ -1.62
CDC27-216ENST00000574304 NEK10Q6ZWH5 1172 aa4.92□□□□□ -1.62
CDC27-216ENST00000574304 H1FNTQ75WM6 255 aaPredicted RBP4.92□□□□□ -1.62
CDC27-216ENST00000574304 C16orf82Q7Z2V1 217 aa4.92□□□□□ -1.62
CDC27-216ENST00000574304 TADA2BQ86TJ2 420 aa4.92□□□□□ -1.62
CDC27-216ENST00000574304 GPAT4Q86UL3 456 aa4.92□□□□□ -1.62
CDC27-216ENST00000574304 KIAA2013Q8IYS2 634 aa4.92□□□□□ -1.62
CDC27-216ENST00000574304 PARP16Q8N5Y8 322 aa4.92□□□□□ -1.62
CDC27-216ENST00000574304 PLD5Q8N7P1 536 aa4.92□□□□□ -1.62
CDC27-216ENST00000574304 SMRP1Q8NCR6 262 aa4.92□□□□□ -1.62
CDC27-216ENST00000574304 USP13Q92995 863 aaPredicted RBP4.92□□□□□ -1.62
CDC27-216ENST00000574304 ZC3HAV1LQ96H79 300 aaKnown RBP4.92□□□□□ -1.62
CDC27-216ENST00000574304 PSMD1Q99460 953 aa4.92□□□□□ -1.62
CDC27-216ENST00000574304 NUF2Q9BZD4 464 aa4.92□□□□□ -1.62
CDC27-216ENST00000574304 IL25Q9H293 177 aa4.92□□□□□ -1.62
CDC27-216ENST00000574304 KIAA1456Q9P272 454 aa4.92□□□□□ -1.62
CDC27-216ENST00000574304 CARD8Q9Y2G2 431 aa4.92□□□□□ -1.62
CDC27-216ENST00000574304 A0A0U1RQF3 1178 aa4.91□□□□□ -1.62
CDC27-216ENST00000574304 RRN3P2A6NIE6 340 aa4.91□□□□□ -1.62
CDC27-216ENST00000574304 PRR23D1E9PI22 279 aaPredicted RBP4.91□□□□□ -1.62
CDC27-216ENST00000574304 PRR23D2P0DMB1 279 aaPredicted RBP4.91□□□□□ -1.62
CDC27-216ENST00000574304 FMO4P31512 558 aa4.91□□□□□ -1.62
CDC27-216ENST00000574304 MAPK9P45984 424 aa4.91□□□□□ -1.62
CDC27-216ENST00000574304 RRP1P56182 461 aaKnown RBP4.91□□□□□ -1.62
CDC27-216ENST00000574304 VAMP2P63027 116 aa4.91□□□□□ -1.62
CDC27-216ENST00000574304 TUBA1BP68363 451 aa4.91□□□□□ -1.62
CDC27-216ENST00000574304 TAF11Q15544 211 aa4.91□□□□□ -1.62
CDC27-216ENST00000574304 C9orf57Q5W0N0 161 aa4.91□□□□□ -1.62
CDC27-216ENST00000574304 SHFQ7M4L6 423 aa4.91□□□□□ -1.62
CDC27-216ENST00000574304 ARMC9Q7Z3E5 817 aa4.91□□□□□ -1.62
CDC27-216ENST00000574304 TMTC1Q8IUR5 882 aa4.91□□□□□ -1.62
CDC27-216ENST00000574304 LRFN5Q96NI6 719 aa4.91□□□□□ -1.62
CDC27-216ENST00000574304 SAGE1Q9NXZ1 904 aa4.91□□□□□ -1.62
CDC27-216ENST00000574304 GGA3Q9NZ52 723 aa4.91□□□□□ -1.62
CDC27-216ENST00000574304 HCN3Q9P1Z3 774 aa4.91□□□□□ -1.62
CDC27-216ENST00000574304 CTNNAL1Q9UBT7 734 aa4.91□□□□□ -1.62
CDC27-216ENST00000574304 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.91□□□□□ -1.62
CDC27-216ENST00000574304 A3GALT2U3KPV4 340 aa4.91□□□□□ -1.62
CDC27-216ENST00000574304 GAGE10A6NGK3 116 aa4.9□□□□□ -1.63
CDC27-216ENST00000574304 NCAM2O15394 837 aa4.9□□□□□ -1.63
CDC27-216ENST00000574304 MTA2O94776 668 aa4.9□□□□□ -1.63
CDC27-216ENST00000574304 GALTP07902 379 aa4.9□□□□□ -1.63
CDC27-216ENST00000574304 EDN2P20800 178 aa4.9□□□□□ -1.63
CDC27-216ENST00000574304 POU1F1P28069 291 aa4.9□□□□□ -1.63
CDC27-216ENST00000574304 PIGAP37287 484 aa4.9□□□□□ -1.63
CDC27-216ENST00000574304 GRSF1Q12849 480 aaKnown RBP eCLIP4.9□□□□□ -1.63
CDC27-216ENST00000574304 VEPH1Q14D04 833 aa4.9□□□□□ -1.63
CDC27-216ENST00000574304 NAA35Q5VZE5 725 aa4.9□□□□□ -1.63
CDC27-216ENST00000574304 LRRC8EQ6NSJ5 796 aa4.9□□□□□ -1.63
CDC27-216ENST00000574304 TMEM81Q6P7N7 255 aa4.9□□□□□ -1.63
CDC27-216ENST00000574304 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.9□□□□□ -1.632e-9■■■■□ 21.4
CDC27-216ENST00000574304 C11orf65Q8NCR3 313 aa4.9□□□□□ -1.63
CDC27-216ENST00000574304 ZCCHC10Q8TBK6 192 aa4.9□□□□□ -1.63
CDC27-216ENST00000574304 SNAPC3Q92966 411 aa4.9□□□□□ -1.63
CDC27-216ENST00000574304 FUZQ9BT04 418 aa4.9□□□□□ -1.63
CDC27-216ENST00000574304 MMTAG2Q9BU76 263 aaKnown RBP4.9□□□□□ -1.63
CDC27-216ENST00000574304 SLC25A10Q9UBX3 287 aaPredicted RBP4.9□□□□□ -1.63
CDC27-216ENST00000574304 SRRM3A6NNA2 597 aaPredicted RBP4.89□□□□□ -1.63
CDC27-216ENST00000574304 KLK8O60259 260 aa4.89□□□□□ -1.63
CDC27-216ENST00000574304 NDUFB4O95168 129 aa4.89□□□□□ -1.63
CDC27-216ENST00000574304 HEXAP06865 529 aa4.89□□□□□ -1.63
CDC27-216ENST00000574304 HNRNPA1P09651 372 aaKnown RBP eCLIP4.89□□□□□ -1.63
CDC27-216ENST00000574304 ITGAXP20702 1163 aa4.89□□□□□ -1.63
CDC27-216ENST00000574304 GGT5P36269 586 aa4.89□□□□□ -1.63
CDC27-216ENST00000574304 GAS1P54826 345 aa4.89□□□□□ -1.63
CDC27-216ENST00000574304 DDR1Q08345 913 aa4.89□□□□□ -1.63
CDC27-216ENST00000574304 ITGADQ13349 1161 aa4.89□□□□□ -1.63
CDC27-216ENST00000574304 SLC39A14Q15043 492 aa4.89□□□□□ -1.63
CDC27-216ENST00000574304 KIF19Q2TAC6 998 aa4.89□□□□□ -1.63
CDC27-216ENST00000574304 XKR9Q5GH70 373 aa4.89□□□□□ -1.63
CDC27-216ENST00000574304 SPSB3Q6PJ21 355 aa4.89□□□□□ -1.63
CDC27-216ENST00000574304 SMAP1Q8IYB5 467 aaPredicted RBP4.89□□□□□ -1.63
CDC27-216ENST00000574304 PGBD5Q8N414 524 aa4.89□□□□□ -1.63
CDC27-216ENST00000574304 ERGIC1Q969X5 290 aa4.89□□□□□ -1.63
CDC27-216ENST00000574304 ZBTB10Q96DT7 871 aa4.89□□□□□ -1.63
CDC27-216ENST00000574304 SIN3AQ96ST3 1273 aa4.89□□□□□ -1.63
CDC27-216ENST00000574304 MXRA8Q9BRK3 442 aa4.89□□□□□ -1.63
CDC27-216ENST00000574304 SMYD2Q9NRG4 433 aa4.89□□□□□ -1.63
CDC27-216ENST00000574304 TBX20Q9UMR3 447 aa4.89□□□□□ -1.63
CDC27-216ENST00000574304 IGLV5-37A0A075B6J1 123 aa4.88□□□□□ -1.63
CDC27-216ENST00000574304 PLSCR5A0PG75 271 aa4.88□□□□□ -1.63
CDC27-216ENST00000574304 SMTNL1A8MU46 457 aa4.88□□□□□ -1.63
CDC27-216ENST00000574304 TNPO2O14787 897 aaKnown RBP4.88□□□□□ -1.63
CDC27-216ENST00000574304 WNT9BO14905 357 aa4.88□□□□□ -1.63
CDC27-216ENST00000574304 HOXC11O43248 304 aaPredicted RBP4.88□□□□□ -1.63
CDC27-216ENST00000574304 HSPA12AO43301 675 aa4.88□□□□□ -1.63
CDC27-216ENST00000574304 TACC1O75410 805 aa4.88□□□□□ -1.63
CDC27-216ENST00000574304 CHATP28329 748 aa4.88□□□□□ -1.63
CDC27-216ENST00000574304 COMPP49747 757 aaPredicted RBP4.88□□□□□ -1.63
CDC27-216ENST00000574304 PEX5P50542 639 aa4.88□□□□□ -1.63
CDC27-216ENST00000574304 EFNA5P52803 228 aa4.88□□□□□ -1.63
CDC27-216ENST00000574304 RPP30P78346 268 aaKnown RBP4.88□□□□□ -1.63
CDC27-216ENST00000574304 RPL36AP83881 106 aaKnown RBP4.88□□□□□ -1.63
CDC27-216ENST00000574304 COASYQ13057 564 aa4.88□□□□□ -1.63
CDC27-216ENST00000574304 MYBPHQ13203 477 aa4.88□□□□□ -1.63
CDC27-216ENST00000574304 CAMK1Q14012 370 aa4.88□□□□□ -1.63
CDC27-216ENST00000574304 DHX34Q14147 1143 aaKnown RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms