RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 ARMC12Q5T9G4 340 aa12.88□□□□□ -0.35
TRAPPC1-206ENST00000573989 PEAR1Q5VY43 1037 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC1-206ENST00000573989 AADACL2Q6P093 401 aa12.88□□□□□ -0.35
TRAPPC1-206ENST00000573989 DARS2Q6PI48 645 aaKnown RBP12.88□□□□□ -0.35
TRAPPC1-206ENST00000573989 ALYREFQ86V81 257 aaKnown RBP12.88□□□□□ -0.35
TRAPPC1-206ENST00000573989 HORMAD1Q86X24 394 aa12.88□□□□□ -0.35
TRAPPC1-206ENST00000573989 C12orf50Q8NA57 414 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC1-206ENST00000573989 CXorf40AQ8TE69 158 aa12.88□□□□□ -0.35
TRAPPC1-206ENST00000573989 PDCD6IPQ8WUM4 868 aaKnown RBP12.88□□□□□ -0.35
TRAPPC1-206ENST00000573989 LRRN4Q8WUT4 740 aa12.88□□□□□ -0.35
TRAPPC1-206ENST00000573989 HTR3CQ8WXA8 447 aa12.88□□□□□ -0.35
TRAPPC1-206ENST00000573989 ECHDC3Q96DC8 303 aa12.88□□□□□ -0.35
TRAPPC1-206ENST00000573989 FRMD8P1Q9BZ68 369 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC1-206ENST00000573989 NOD2Q9HC29 1040 aa12.88□□□□□ -0.35
TRAPPC1-206ENST00000573989 SEMA4GQ9NTN9 838 aa12.88□□□□□ -0.35
TRAPPC1-206ENST00000573989 KLHL8Q9P2G9 620 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC1-206ENST00000573989 DMTF1Q9Y222 760 aa12.88□□□□□ -0.35
TRAPPC1-206ENST00000573989 FADS3Q9Y5Q0 445 aa12.88□□□□□ -0.35
TRAPPC1-206ENST00000573989 EP300Q09472 2414 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC1-206ENST00000573989 GPR179Q6PRD1 2367 aa12.87□□□□□ -0.35
TRAPPC1-206ENST00000573989 DOCK9Q9BZ29 2069 aa12.87□□□□□ -0.35
TRAPPC1-206ENST00000573989 RNF103O00237 685 aa12.87□□□□□ -0.35
TRAPPC1-206ENST00000573989 TRAFD1O14545 582 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC1-206ENST00000573989 BCAT2O15382 392 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC1-206ENST00000573989 HTRA2O43464 458 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC1-206ENST00000573989 CPP00450 1065 aa12.87□□□□□ -0.35
TRAPPC1-206ENST00000573989 CFIP05156 583 aa12.87□□□□□ -0.35
TRAPPC1-206ENST00000573989 TIMP2P16035 220 aa12.87□□□□□ -0.35
TRAPPC1-206ENST00000573989 MAOBP27338 520 aa12.87□□□□□ -0.35
TRAPPC1-206ENST00000573989 TNNT3P45378 269 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC1-206ENST00000573989 EPHB1P54762 984 aa12.87□□□□□ -0.35
TRAPPC1-206ENST00000573989 TAS2R38P59533 333 aa12.87□□□□□ -0.35
TRAPPC1-206ENST00000573989 RACK1P63244 317 aaKnown RBP12.87□□□□□ -0.35
TRAPPC1-206ENST00000573989 ZBTB17Q13105 803 aa12.87□□□□□ -0.35
TRAPPC1-206ENST00000573989 SGCGQ13326 291 aa12.87□□□□□ -0.35
TRAPPC1-206ENST00000573989 TEAD4Q15561 434 aa12.87□□□□□ -0.35
TRAPPC1-206ENST00000573989 TRIM61Q5EBN2 209 aa12.87□□□□□ -0.35
TRAPPC1-206ENST00000573989 PLA2G2CQ5R387 149 aa12.87□□□□□ -0.35
TRAPPC1-206ENST00000573989 SLC23A3Q6PIS1 610 aa12.87□□□□□ -0.35
TRAPPC1-206ENST00000573989 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.87□□□□□ -0.35
TRAPPC1-206ENST00000573989 SPOCK2Q92563 424 aa12.87□□□□□ -0.35
TRAPPC1-206ENST00000573989 TEKT5Q96M29 485 aa12.87□□□□□ -0.35
TRAPPC1-206ENST00000573989 AGAP3Q96P47 875 aa12.87□□□□□ -0.35
TRAPPC1-206ENST00000573989 C1QTNF7Q9BXJ2 289 aa12.87□□□□□ -0.35
TRAPPC1-206ENST00000573989 TLR10Q9BXR5 811 aa12.87□□□□□ -0.35
TRAPPC1-206ENST00000573989 SLC25A51Q9H1U9 297 aa12.87□□□□□ -0.35
TRAPPC1-206ENST00000573989 TRHDEQ9UKU6 1024 aa12.87□□□□□ -0.35
TRAPPC1-206ENST00000573989 PHTF1Q9UMS5 762 aa12.87□□□□□ -0.35
TRAPPC1-206ENST00000573989 PCDHB9Q9Y5E1 797 aa12.87□□□□□ -0.35
TRAPPC1-206ENST00000573989 PCDHGC4Q9Y5F7 938 aa12.87□□□□□ -0.35
TRAPPC1-206ENST00000573989 RAI2Q9Y5P3 530 aa12.87□□□□□ -0.35
TRAPPC1-206ENST00000573989 PLXNA2O75051 1894 aa12.87□□□□□ -0.35
TRAPPC1-206ENST00000573989 ATXN2Q99700 1313 aaKnown RBP12.87□□□□□ -0.35
TRAPPC1-206ENST00000573989 PTPRZ1P23471 2315 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC1-206ENST00000573989 PIEZO1Q92508 2521 aa12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 A0A1W2PQU0 124 aa12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 TTC24A2A3L6 582 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 CFAP69A5D8W1 941 aa12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 AREL1O15033 823 aa12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 LATO43561 262 aa12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 MAGEC1O60732 1142 aa12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 IGHV4-34P06331 123 aa12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 SYPP08247 313 aa12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 CYP2A6P11509 494 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 PTPN3P26045 913 aa12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 MAT2AP31153 395 aaKnown RBP12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 ABL2P42684 1182 aa12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 AFF3P51826 1226 aaKnown RBP12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 PPP2CBP62714 309 aa12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 PPP2CAP67775 309 aa12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 FAM193AP78312 1265 aa12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 DSC2Q02487 901 aa12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 KLF1Q13351 362 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 SLC14A2Q15849 920 aa12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 ITPRIPL1Q6GPH6 555 aa12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 USP45Q70EL2 814 aa12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 PID1Q7Z2X4 250 aa12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 ADAT2Q7Z6V5 191 aaKnown RBP12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 SLC13A5Q86YT5 568 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 ZCCHC9Q8N567 271 aaKnown RBP12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 DCLK2Q8N568 766 aa12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 FAM174AQ8TBP5 190 aa12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 VOPP1Q96AW1 172 aa12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 SERAC1Q96JX3 654 aa12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 PBKQ96KB5 322 aa12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 PPP1R2P1Q96PQ5 205 aa12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 HERPUD2Q9BSE4 406 aa12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 ADGRE3Q9BY15 652 aa12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 CEP41Q9BYV8 373 aa12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 GLOD4Q9HC38 313 aa12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 PCDH12Q9NPG4 1184 aa12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 TMEM74BQ9NUR3 256 aa12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 DNPEPQ9ULA0 475 aa12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 SLC6A14Q9UN76 642 aa12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 CACNA1EQ15878 2313 aa12.86□□□□□ -0.35
TRAPPC1-206ENST00000573989 PRAMEF26H0Y7S4 382 aa12.85□□□□□ -0.35
TRAPPC1-206ENST00000573989 RIOK3O14730 519 aaKnown RBP12.85□□□□□ -0.35
TRAPPC1-206ENST00000573989 KCNN4O15554 427 aa12.85□□□□□ -0.35
TRAPPC1-206ENST00000573989 CEP104O60308 925 aa12.85□□□□□ -0.35
TRAPPC1-206ENST00000573989 GJB3O75712 270 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms