RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 ATP13A3Q9H7F0 1226 aa13.69□□□□□ -0.22
RPAIN-213ENST00000573577 TM9SF3Q9HD45 589 aa13.69□□□□□ -0.22
RPAIN-213ENST00000573577 JRKLQ9Y4A0 524 aa13.69□□□□□ -0.22
RPAIN-213ENST00000573577 PCDH15Q96QU1 1955 aa13.69□□□□□ -0.22
RPAIN-213ENST00000573577 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.68□□□□□ -0.22
RPAIN-213ENST00000573577 A0A1W2PPC4 97 aa13.68□□□□□ -0.22
RPAIN-213ENST00000573577 KCNK3O14649 394 aa13.68□□□□□ -0.22
RPAIN-213ENST00000573577 UGT2B4P06133 528 aa13.68□□□□□ -0.22
RPAIN-213ENST00000573577 PECAM1P16284 738 aaPredicted RBP13.68□□□□□ -0.22
RPAIN-213ENST00000573577 SERPINA4P29622 427 aa13.68□□□□□ -0.22
RPAIN-213ENST00000573577 NEK3P51956 506 aa13.68□□□□□ -0.22
RPAIN-213ENST00000573577 TAS2R38P59533 333 aa13.68□□□□□ -0.22
RPAIN-213ENST00000573577 PPP2CBP62714 309 aa13.68□□□□□ -0.22
RPAIN-213ENST00000573577 PPP2CAP67775 309 aa13.68□□□□□ -0.22
RPAIN-213ENST00000573577 IFI35P80217 286 aaPredicted RBP13.68□□□□□ -0.22
RPAIN-213ENST00000573577 ADCY2Q08462 1091 aa13.68□□□□□ -0.22
RPAIN-213ENST00000573577 ITKQ08881 620 aa13.68□□□□□ -0.22
RPAIN-213ENST00000573577 GRIK2Q13002 908 aa13.68□□□□□ -0.22
RPAIN-213ENST00000573577 ZNF569Q5MCW4 686 aa13.68□□□□□ -0.22
RPAIN-213ENST00000573577 GDPD4Q6W3E5 623 aa13.68□□□□□ -0.22
RPAIN-213ENST00000573577 ERN2Q76MJ5 926 aaKnown RBP13.68□□□□□ -0.22
RPAIN-213ENST00000573577 MINDY1Q8N5J2 469 aa13.68□□□□□ -0.22
RPAIN-213ENST00000573577 HCAR2Q8TDS4 363 aa13.68□□□□□ -0.22
RPAIN-213ENST00000573577 NUDCD1Q96RS6 583 aa13.68□□□□□ -0.22
RPAIN-213ENST00000573577 PREBQ9HCU5 417 aa13.68□□□□□ -0.22
RPAIN-213ENST00000573577 NT5MQ9NPB1 228 aa13.68□□□□□ -0.22
RPAIN-213ENST00000573577 SCUBE2Q9NQ36 999 aa13.68□□□□□ -0.22
RPAIN-213ENST00000573577 RBM22Q9NW64 420 aaKnown RBP eCLIP13.68□□□□□ -0.22
RPAIN-213ENST00000573577 SAE1Q9UBE0 346 aaPredicted RBP13.68□□□□□ -0.22
RPAIN-213ENST00000573577 PYCARDQ9ULZ3 195 aa13.68□□□□□ -0.22
RPAIN-213ENST00000573577 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.68□□□□□ -0.22
RPAIN-213ENST00000573577 CACNA1AO00555 2505 aa13.67□□□□□ -0.22
RPAIN-213ENST00000573577 A0A1W2PQ67 120 aa13.67□□□□□ -0.22
RPAIN-213ENST00000573577 H7C0C1 242 aa13.67□□□□□ -0.22
RPAIN-213ENST00000573577 KCNK1O00180 336 aa13.67□□□□□ -0.22
RPAIN-213ENST00000573577 MUSKO15146 869 aa13.67□□□□□ -0.22
RPAIN-213ENST00000573577 LATO43561 262 aa13.67□□□□□ -0.22
RPAIN-213ENST00000573577 JCHAINP01591 159 aa13.67□□□□□ -0.22
RPAIN-213ENST00000573577 GKP32189 559 aa13.67□□□□□ -0.22
RPAIN-213ENST00000573577 ATP5OP48047 213 aa13.67□□□□□ -0.22
RPAIN-213ENST00000573577 GRIA4P48058 902 aa13.67□□□□□ -0.22
RPAIN-213ENST00000573577 CSNK1EP49674 416 aaKnown RBP13.67□□□□□ -0.22
RPAIN-213ENST00000573577 SUOXP51687 545 aa13.67□□□□□ -0.22
RPAIN-213ENST00000573577 RACK1P63244 317 aaKnown RBP13.67□□□□□ -0.22
RPAIN-213ENST00000573577 OTUD4Q01804 1114 aaKnown RBP13.67□□□□□ -0.22
RPAIN-213ENST00000573577 BCL2L1Q07817 233 aa13.67□□□□□ -0.22
RPAIN-213ENST00000573577 PRKD1Q15139 912 aaPredicted RBP13.67□□□□□ -0.22
RPAIN-213ENST00000573577 NOMO1Q15155 1222 aa13.67□□□□□ -0.22
RPAIN-213ENST00000573577 TEAD4Q15561 434 aa13.67□□□□□ -0.22
RPAIN-213ENST00000573577 UAP1L1Q3KQV9 507 aa13.67□□□□□ -0.22
RPAIN-213ENST00000573577 SLC45A4Q5BKX6 768 aa13.67□□□□□ -0.22
RPAIN-213ENST00000573577 AADACL2Q6P093 401 aa13.67□□□□□ -0.22
RPAIN-213ENST00000573577 FBXL19Q6PCT2 694 aa13.67□□□□□ -0.22
RPAIN-213ENST00000573577 BRAT1Q6PJG6 821 aa13.67□□□□□ -0.22
RPAIN-213ENST00000573577 ZC3H18Q86VM9 953 aaKnown RBP13.67□□□□□ -0.22
RPAIN-213ENST00000573577 TRIM69Q86WT6 500 aa13.67□□□□□ -0.22
RPAIN-213ENST00000573577 PAF1Q8N7H5 531 aa13.67□□□□□ -0.22
RPAIN-213ENST00000573577 OR2I1PQ8NGU4 316 aa13.67□□□□□ -0.22
RPAIN-213ENST00000573577 ACTL9Q8TC94 416 aa13.67□□□□□ -0.22
RPAIN-213ENST00000573577 RAB7BQ96AH8 199 aa13.67□□□□□ -0.22
RPAIN-213ENST00000573577 KLHL32Q96NJ5 620 aa13.67□□□□□ -0.22
RPAIN-213ENST00000573577 VAT1Q99536 393 aa13.67□□□□□ -0.22
RPAIN-213ENST00000573577 TLR10Q9BXR5 811 aa13.67□□□□□ -0.22
RPAIN-213ENST00000573577 SUV39H2Q9H5I1 410 aa13.67□□□□□ -0.22
RPAIN-213ENST00000573577 EBF2Q9HAK2 575 aa13.67□□□□□ -0.22
RPAIN-213ENST00000573577 SEPT10Q9P0V9 454 aa13.67□□□□□ -0.22
RPAIN-213ENST00000573577 DKK3Q9UBP4 350 aa13.67□□□□□ -0.22
RPAIN-213ENST00000573577 TTLL3Q9Y4R7 772 aa13.67□□□□□ -0.22
RPAIN-213ENST00000573577 A0A1B0GVT2 93 aa13.66□□□□□ -0.22
RPAIN-213ENST00000573577 C16orf96A6NNT2 1141 aa13.66□□□□□ -0.22
RPAIN-213ENST00000573577 INSIG1O15503 277 aa13.66□□□□□ -0.22
RPAIN-213ENST00000573577 SOCS5O75159 536 aa13.66□□□□□ -0.22
RPAIN-213ENST00000573577 ADRB3P13945 408 aa13.66□□□□□ -0.22
RPAIN-213ENST00000573577 CR2P20023 1033 aa13.66□□□□□ -0.22
RPAIN-213ENST00000573577 CA4P22748 312 aa13.66□□□□□ -0.22
RPAIN-213ENST00000573577 XPAP23025 273 aaPredicted RBP13.66□□□□□ -0.22
RPAIN-213ENST00000573577 NFKBIAP25963 317 aa13.66□□□□□ -0.22
RPAIN-213ENST00000573577 NUDT1P36639 197 aa13.66□□□□□ -0.22
RPAIN-213ENST00000573577 RGRP47804 291 aa13.66□□□□□ -0.22
RPAIN-213ENST00000573577 EIF3EP60228 445 aaKnown RBP13.66□□□□□ -0.22
RPAIN-213ENST00000573577 MAXP61244 160 aa13.66□□□□□ -0.22
RPAIN-213ENST00000573577 BNC1Q01954 994 aa13.66□□□□□ -0.22
RPAIN-213ENST00000573577 KLF1Q13351 362 aaPredicted RBP13.66□□□□□ -0.22
RPAIN-213ENST00000573577 ALG1LQ6GMV1 187 aa13.66□□□□□ -0.22
RPAIN-213ENST00000573577 NEK5Q6P3R8 708 aa13.66□□□□□ -0.22
RPAIN-213ENST00000573577 IL27RAQ6UWB1 636 aa13.66□□□□□ -0.22
RPAIN-213ENST00000573577 PARS2Q7L3T8 475 aaKnown RBP13.66□□□□□ -0.22
RPAIN-213ENST00000573577 CDKL3Q8IVW4 592 aaPredicted RBP13.66□□□□□ -0.22
RPAIN-213ENST00000573577 SLC35F6Q8N357 371 aa13.66□□□□□ -0.22
RPAIN-213ENST00000573577 PGBD5Q8N414 524 aa13.66□□□□□ -0.22
RPAIN-213ENST00000573577 LRRN4Q8WUT4 740 aa13.66□□□□□ -0.22
RPAIN-213ENST00000573577 MAIP1Q8WWC4 291 aa13.66□□□□□ -0.22
RPAIN-213ENST00000573577 VOPP1Q96AW1 172 aa13.66□□□□□ -0.22
RPAIN-213ENST00000573577 SLC6A18Q96N87 628 aa13.66□□□□□ -0.22
RPAIN-213ENST00000573577 QKIQ96PU8 341 aaKnown RBP eCLIP13.66□□□□□ -0.22
RPAIN-213ENST00000573577 IL12RB2Q99665 862 aa13.66□□□□□ -0.22
RPAIN-213ENST00000573577 FRMD8P1Q9BZ68 369 aaPredicted RBP13.66□□□□□ -0.22
RPAIN-213ENST00000573577 DNAAF2Q9NVR5 837 aaKnown RBP13.66□□□□□ -0.22
RPAIN-213ENST00000573577 PI4KAP42356 2102 aa13.66□□□□□ -0.22
RPAIN-213ENST00000573577 USP27XA6NNY8 438 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms