RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 NSUN2Q08J23 767 aaKnown RBP eCLIP7.05□□□□□ -1.28
SMG6-209ENST00000571442 AP1B1Q10567 949 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 TFDP2Q14188 446 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 PDK1Q15118 436 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 SIX1Q15475 284 aaPredicted RBP7.05□□□□□ -1.28
SMG6-209ENST00000571442 CSRP2Q16527 193 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 RSPO4Q2I0M5 234 aaPredicted RBP7.05□□□□□ -1.28
SMG6-209ENST00000571442 ZNF284Q2VY69 593 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 TMEM259Q4ZIN3 620 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 TRIM61Q5EBN2 209 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 SPDYCQ5MJ68 293 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 TPRG1LQ5T0D9 272 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 TBC1D3GQ6DHY5 549 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 ALG1LQ6GMV1 187 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 TBC1D3CQ6IPX1 549 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 PRR23CQ6ZRP0 262 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 NYAP1Q6ZVC0 841 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 PRPF39Q86UA1 669 aaKnown RBP7.05□□□□□ -1.28
SMG6-209ENST00000571442 SYT12Q8IV01 421 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 RGL4Q8IZJ4 473 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 TBC1D3Q8IZP1 549 aaPredicted RBP7.05□□□□□ -1.28
SMG6-209ENST00000571442 SYCE1Q8N0S2 351 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 ACTL9Q8TC94 416 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 LRIG1Q96JA1 1093 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 CALR3Q96L12 384 aaKnown RBP7.05□□□□□ -1.28
SMG6-209ENST00000571442 QKIQ96PU8 341 aaKnown RBP eCLIP7.05□□□□□ -1.28
SMG6-209ENST00000571442 MIR1-1HGQ9H1L0 117 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 IL21RQ9HBE5 538 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 TM9SF3Q9HD45 589 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 PCDH12Q9NPG4 1184 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 SCUBE2Q9NQ36 999 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 SEPT10Q9P0V9 454 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 DKK3Q9UBP4 350 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 CDV3Q9UKY7 258 aaKnown RBP7.05□□□□□ -1.28
SMG6-209ENST00000571442 COQ6Q9Y2Z9 468 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.05□□□□□ -1.28
SMG6-209ENST00000571442 PCDHGA5Q9Y5G8 931 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 MAP1BP46821 2468 aaKnown RBP7.05□□□□□ -1.28
SMG6-209ENST00000571442 CHD8Q9HCK8 2581 aa7.05□□□□□ -1.28
SMG6-209ENST00000571442 ASCC3Q8N3C0 2202 aaKnown RBP7.04□□□□□ -1.28
SMG6-209ENST00000571442 MYLKQ15746 1914 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 A0A1B0GVT2 93 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 IGLON5A6NGN9 336 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 LRRC72A6NJI9 287 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 GOLGA8CPA6NN73 597 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 A8MX80 341 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 MIF4GDA9UHW6 222 aaKnown RBP7.04□□□□□ -1.28
SMG6-209ENST00000571442 UPK3BL1B0FP48 263 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 UPK3BL2E5RIL1 263 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 APOC4-APOC2K7ER74 178 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 CDX4O14627 284 aaPredicted RBP7.04□□□□□ -1.28
SMG6-209ENST00000571442 KCNK3O14649 394 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 ENC1O14682 589 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 RIOK3O14730 519 aaKnown RBP7.04□□□□□ -1.28
SMG6-209ENST00000571442 BCAT2O15382 392 aaPredicted RBP7.04□□□□□ -1.28
SMG6-209ENST00000571442 SLC31A1O15431 190 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 AP1G1O43747 822 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 MMP20O60882 483 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 PCDH8O95206 1070 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 PGLSO95336 258 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 MT-CYBP00156 380 aaPredicted RBP7.04□□□□□ -1.28
SMG6-209ENST00000571442 APOC2P02655 101 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 ATP1A1P05023 1023 aaKnown RBP7.04□□□□□ -1.28
SMG6-209ENST00000571442 ALPIP09923 528 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 ZFXP17010 805 aaPredicted RBP7.04□□□□□ -1.28
SMG6-209ENST00000571442 CTPS1P17812 591 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 SDHBP21912 280 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 LHCGRP22888 699 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 CD27P26842 260 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 CXCR5P32302 372 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 CD86P42081 329 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 CSNK1EP49674 416 aaKnown RBP7.04□□□□□ -1.28
SMG6-209ENST00000571442 RENBPP51606 427 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 CCR5P51681 352 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 GDF10P55107 478 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 CLDN2P57739 230 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 AP1S1P61966 158 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 LMNB2Q03252 620 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 BCL2L1Q07817 233 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 ITKQ08881 620 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 GRIK2Q13002 908 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 OLIG2Q13516 323 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 UGP2Q16851 508 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 TMEM52BQ4KMG9 183 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 ODF2Q5BJF6 829 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 TIGD7Q6NT04 549 aaPredicted RBP7.04□□□□□ -1.28
SMG6-209ENST00000571442 FBXL19Q6PCT2 694 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 SLC23A3Q6PIS1 610 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 RFLNAQ6ZTI6 216 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 ADAT2Q7Z6V5 191 aaKnown RBP7.04□□□□□ -1.28
SMG6-209ENST00000571442 PRUNE1Q86TP1 453 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 TTC7BQ86TV6 843 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 TSPAN33Q86UF1 283 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 TRIM69Q86WT6 500 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 HORMAD1Q86X24 394 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 LRRC49Q8IUZ0 686 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 ZNF567Q8N184 647 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 PELI3Q8N2H9 469 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 SLC35F6Q8N357 371 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 TXLNBQ8N3L3 684 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms