RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 RMND5BQ96G75 393 aaPredicted RBP17.6■□□□□ 0.41
SCARF1-205ENST00000571272 ZFP42Q96MM3 310 aa17.6■□□□□ 0.41
SCARF1-205ENST00000571272 IGSF5Q9NSI5 407 aa17.6■□□□□ 0.41
SCARF1-205ENST00000571272 FBXO5Q9UKT4 447 aa17.6■□□□□ 0.41
SCARF1-205ENST00000571272 AAR2Q9Y312 384 aaKnown RBP17.6■□□□□ 0.41
SCARF1-205ENST00000571272 TSC2P49815 1807 aa17.6■□□□□ 0.41
SCARF1-205ENST00000571272 A8MT66 165 aa17.59■□□□□ 0.41
SCARF1-205ENST00000571272 HTRA2O43464 458 aaPredicted RBP17.59■□□□□ 0.41
SCARF1-205ENST00000571272 AKAP10O43572 662 aa17.59■□□□□ 0.41
SCARF1-205ENST00000571272 XPOTO43592 962 aaKnown RBP17.59■□□□□ 0.41
SCARF1-205ENST00000571272 SNRPB2P08579 225 aaKnown RBP17.59■□□□□ 0.41
SCARF1-205ENST00000571272 CPB1P15086 417 aa17.59■□□□□ 0.41
SCARF1-205ENST00000571272 SLC7A1P30825 629 aa17.59■□□□□ 0.41
SCARF1-205ENST00000571272 GRIA3P42263 894 aa17.59■□□□□ 0.41
SCARF1-205ENST00000571272 CLCN2P51788 898 aa17.59■□□□□ 0.41
SCARF1-205ENST00000571272 EMP3P54852 163 aa17.59■□□□□ 0.41
SCARF1-205ENST00000571272 C6orf10Q5SRN2 563 aa17.59■□□□□ 0.41
SCARF1-205ENST00000571272 BTBD8Q5XKL5 378 aa17.59■□□□□ 0.41
SCARF1-205ENST00000571272 FAM47BQ8NA70 645 aa17.59■□□□□ 0.41
SCARF1-205ENST00000571272 CANT1Q8WVQ1 401 aa17.59■□□□□ 0.41
SCARF1-205ENST00000571272 OLFM1Q99784 485 aa17.59■□□□□ 0.41
SCARF1-205ENST00000571272 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.59■□□□□ 0.41
SCARF1-205ENST00000571272 SFMBT1Q9UHJ3 866 aa17.59■□□□□ 0.41
SCARF1-205ENST00000571272 SAC3D1A6NKF1 404 aa17.59■□□□□ 0.41
SCARF1-205ENST00000571272 SOCS2O14508 198 aa17.59■□□□□ 0.41
SCARF1-205ENST00000571272 MMP3P08254 477 aa17.59■□□□□ 0.41
SCARF1-205ENST00000571272 IREB2P48200 963 aaKnown RBP17.59■□□□□ 0.41
SCARF1-205ENST00000571272 MAPRE2Q15555 327 aa17.59■□□□□ 0.41
SCARF1-205ENST00000571272 TOP6BLQ8N6T0 577 aa17.59■□□□□ 0.41
SCARF1-205ENST00000571272 DNAJB3Q8WWF6 145 aa17.59■□□□□ 0.41
SCARF1-205ENST00000571272 STON2Q8WXE9 905 aa17.59■□□□□ 0.41
SCARF1-205ENST00000571272 PCED1BQ96HM7 432 aa17.59■□□□□ 0.41
SCARF1-205ENST00000571272 SPON1Q9HCB6 807 aa17.59■□□□□ 0.41
SCARF1-205ENST00000571272 DNAAF2Q9NVR5 837 aaKnown RBP17.59■□□□□ 0.41
SCARF1-205ENST00000571272 CROTQ9UKG9 612 aa17.59■□□□□ 0.41
SCARF1-205ENST00000571272 DNAH12Q6ZR08 3092 aa17.59■□□□□ 0.41
SCARF1-205ENST00000571272 TCRBV3S1A0A5B6 114 aa17.58■□□□□ 0.41
SCARF1-205ENST00000571272 CXCL11O14625 94 aa17.58■□□□□ 0.41
SCARF1-205ENST00000571272 MAGEB3O15480 346 aa17.58■□□□□ 0.41
SCARF1-205ENST00000571272 SMPD1P17405 629 aa17.58■□□□□ 0.41
SCARF1-205ENST00000571272 LRPAP1P30533 357 aa17.58■□□□□ 0.41
SCARF1-205ENST00000571272 PSMD8P48556 350 aa17.58■□□□□ 0.41
SCARF1-205ENST00000571272 LRCH3Q96II8 777 aa17.58■□□□□ 0.41
SCARF1-205ENST00000571272 MEAF6Q9HAF1 191 aa17.58■□□□□ 0.41
SCARF1-205ENST00000571272 MRPL40Q9NQ50 206 aaKnown RBP17.58■□□□□ 0.41
SCARF1-205ENST00000571272 CD300AQ9UGN4 299 aa17.58■□□□□ 0.41
SCARF1-205ENST00000571272 TCAF1Q9Y4C2 921 aa17.58■□□□□ 0.41
SCARF1-205ENST00000571272 RALGAPA2Q2PPJ7 1873 aa17.58■□□□□ 0.41
SCARF1-205ENST00000571272 AP3B1O00203 1094 aa17.58■□□□□ 0.4
SCARF1-205ENST00000571272 NRP2O60462 931 aa17.58■□□□□ 0.4
SCARF1-205ENST00000571272 IPO13O94829 963 aaKnown RBP17.58■□□□□ 0.4
SCARF1-205ENST00000571272 CCDC166P0CW27 439 aa17.58■□□□□ 0.4
SCARF1-205ENST00000571272 UGT1A6P19224 532 aa17.58■□□□□ 0.4
SCARF1-205ENST00000571272 PCSK7Q16549 785 aa17.58■□□□□ 0.4
SCARF1-205ENST00000571272 FAM83EQ2M2I3 478 aa17.58■□□□□ 0.4
SCARF1-205ENST00000571272 TECRLQ5HYJ1 363 aa17.58■□□□□ 0.4
SCARF1-205ENST00000571272 FAM35AQ86V20 835 aa17.58■□□□□ 0.4
SCARF1-205ENST00000571272 FSD1LQ9BXM9 530 aa17.58■□□□□ 0.4
SCARF1-205ENST00000571272 VTA1Q9NP79 307 aa17.58■□□□□ 0.4
SCARF1-205ENST00000571272 PNPLA3Q9NST1 481 aa17.58■□□□□ 0.4
SCARF1-205ENST00000571272 ARHGEF38Q9NXL2 777 aa17.58■□□□□ 0.4
SCARF1-205ENST00000571272 AURKCQ9UQB9 309 aa17.58■□□□□ 0.4
SCARF1-205ENST00000571272 FAM149AA5PLN7 773 aa17.58■□□□□ 0.4
SCARF1-205ENST00000571272 TPST1O60507 370 aa17.58■□□□□ 0.4
SCARF1-205ENST00000571272 ZNF189O75820 626 aaPredicted RBP17.58■□□□□ 0.4
SCARF1-205ENST00000571272 SRP72O76094 671 aaKnown RBP17.58■□□□□ 0.4
SCARF1-205ENST00000571272 KCNE1P15382 129 aa17.58■□□□□ 0.4
SCARF1-205ENST00000571272 ALDH3B2P48448 385 aa17.58■□□□□ 0.4
SCARF1-205ENST00000571272 DNAJB13P59910 316 aa17.58■□□□□ 0.4
SCARF1-205ENST00000571272 NEPROQ6NW34 567 aa17.58■□□□□ 0.4
SCARF1-205ENST00000571272 DHFR2Q86XF0 187 aa17.58■□□□□ 0.4
SCARF1-205ENST00000571272 ATPAF2Q8N5M1 289 aa17.58■□□□□ 0.4
SCARF1-205ENST00000571272 C2CD4AQ8NCU7 369 aaPredicted RBP17.58■□□□□ 0.4
SCARF1-205ENST00000571272 PBXIP1Q96AQ6 731 aa17.58■□□□□ 0.4
SCARF1-205ENST00000571272 GLOD4Q9HC38 313 aa17.58■□□□□ 0.4
SCARF1-205ENST00000571272 CNGB3Q9NQW8 809 aa17.58■□□□□ 0.4
SCARF1-205ENST00000571272 DUS2Q9NX74 493 aaKnown RBP17.58■□□□□ 0.4
SCARF1-205ENST00000571272 A0A087X1B8 175 aa17.57■□□□□ 0.4
SCARF1-205ENST00000571272 C9JVG2 144 aa17.57■□□□□ 0.4
SCARF1-205ENST00000571272 H0YJX3 145 aa17.57■□□□□ 0.4
SCARF1-205ENST00000571272 GNAO1P09471 354 aa17.57■□□□□ 0.4
SCARF1-205ENST00000571272 CDK9P50750 372 aaKnown RBP17.57■□□□□ 0.4
SCARF1-205ENST00000571272 PLOD1Q02809 727 aaPredicted RBP17.57■□□□□ 0.4
SCARF1-205ENST00000571272 PRKCQQ04759 706 aa17.57■□□□□ 0.4
SCARF1-205ENST00000571272 TRAP1Q12931 704 aaKnown RBP17.57■□□□□ 0.4
SCARF1-205ENST00000571272 MAP7D1Q3KQU3 841 aa17.57■□□□□ 0.4
SCARF1-205ENST00000571272 TAC4Q86UU9 113 aa17.57■□□□□ 0.4
SCARF1-205ENST00000571272 FIBCD1Q8N539 461 aa17.57■□□□□ 0.4
SCARF1-205ENST00000571272 OR6J1Q8NGC5 347 aa17.57■□□□□ 0.4
SCARF1-205ENST00000571272 SLC16A10Q8TF71 515 aa17.57■□□□□ 0.4
SCARF1-205ENST00000571272 HSPBAP1Q96EW2 488 aa17.57■□□□□ 0.4
SCARF1-205ENST00000571272 EFHD1Q9BUP0 239 aa17.57■□□□□ 0.4
SCARF1-205ENST00000571272 EML4Q9HC35 981 aaKnown RBP17.57■□□□□ 0.4
SCARF1-205ENST00000571272 SARDHQ9UL12 918 aa17.57■□□□□ 0.4
SCARF1-205ENST00000571272 MTF2Q9Y483 593 aaPredicted RBP17.57■□□□□ 0.4
SCARF1-205ENST00000571272 IPPQ9Y573 584 aa17.57■□□□□ 0.4
SCARF1-205ENST00000571272 SCN4AP35499 1836 aa17.57■□□□□ 0.4
SCARF1-205ENST00000571272 UBFD1O14562 309 aaKnown RBP17.57■□□□□ 0.4
SCARF1-205ENST00000571272 PSMD3O43242 534 aa17.57■□□□□ 0.4
SCARF1-205ENST00000571272 SEC24DO94855 1032 aaPredicted RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms