RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 ADNPQ9H2P0 1102 aa11.94□□□□□ -0.5
GTF3C1-209ENST00000568569 PPARGC1AQ9UBK2 798 aaKnown RBP11.94□□□□□ -0.5
GTF3C1-209ENST00000568569 APPL1Q9UKG1 709 aa11.94□□□□□ -0.5
GTF3C1-209ENST00000568569 MAN1B1Q9UKM7 699 aa11.94□□□□□ -0.5
GTF3C1-209ENST00000568569 HPCAL4Q9UM19 191 aa11.94□□□□□ -0.5
GTF3C1-209ENST00000568569 CTNND2Q9UQB3 1225 aa11.94□□□□□ -0.5
GTF3C1-209ENST00000568569 SPTAN1Q13813 2472 aaKnown RBP11.94□□□□□ -0.5
GTF3C1-209ENST00000568569 GOLGA6L4A6NEF3 574 aa11.93□□□□□ -0.5
GTF3C1-209ENST00000568569 PPP1R3GB7ZBB8 358 aa11.93□□□□□ -0.5
GTF3C1-209ENST00000568569 C9orf172C9J069 976 aa11.93□□□□□ -0.5
GTF3C1-209ENST00000568569 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.93□□□□□ -0.5
GTF3C1-209ENST00000568569 PNLIPP16233 465 aa11.93□□□□□ -0.5
GTF3C1-209ENST00000568569 ETV5P41161 510 aa11.93□□□□□ -0.5
GTF3C1-209ENST00000568569 MAPKAPK2P49137 400 aa11.93□□□□□ -0.5
GTF3C1-209ENST00000568569 MAPK10P53779 464 aa11.93□□□□□ -0.5
GTF3C1-209ENST00000568569 SRP54P61011 504 aaKnown RBP11.93□□□□□ -0.5
GTF3C1-209ENST00000568569 CERCAMQ5T4B2 595 aa11.93□□□□□ -0.5
GTF3C1-209ENST00000568569 FAM102AQ5T9C2 384 aaPredicted RBP11.93□□□□□ -0.5
GTF3C1-209ENST00000568569 TMEM164Q5U3C3 297 aa11.93□□□□□ -0.5
GTF3C1-209ENST00000568569 ENPP7Q6UWV6 458 aa11.93□□□□□ -0.5
GTF3C1-209ENST00000568569 RD3Q7Z3Z2 195 aa11.93□□□□□ -0.5
GTF3C1-209ENST00000568569 SPRED1Q7Z699 444 aa11.93□□□□□ -0.5
GTF3C1-209ENST00000568569 FAM131BQ86XD5 332 aa11.93□□□□□ -0.5
GTF3C1-209ENST00000568569 Q8N9G6 341 aaPredicted RBP11.93□□□□□ -0.5
GTF3C1-209ENST00000568569 ZNF564Q8TBZ8 553 aaPredicted RBP11.93□□□□□ -0.5
GTF3C1-209ENST00000568569 TIGD1Q96MW7 591 aa11.93□□□□□ -0.5
GTF3C1-209ENST00000568569 GDAP1L1Q96MZ0 367 aa11.93□□□□□ -0.5
GTF3C1-209ENST00000568569 RBM15Q96T37 977 aaKnown RBP eCLIP11.93□□□□□ -0.5
GTF3C1-209ENST00000568569 WRAP53Q9BUR4 548 aaKnown RBP11.93□□□□□ -0.5
GTF3C1-209ENST00000568569 B3GNT4Q9C0J1 378 aa11.93□□□□□ -0.5
GTF3C1-209ENST00000568569 AKAP7Q9P0M2 348 aaPredicted RBP11.93□□□□□ -0.5
GTF3C1-209ENST00000568569 KLQ9UEF7 1012 aa11.93□□□□□ -0.5
GTF3C1-209ENST00000568569 RNF215Q9Y6U7 377 aa11.93□□□□□ -0.5
GTF3C1-209ENST00000568569 TEX15Q9BXT5 2789 aa11.93□□□□□ -0.5
GTF3C1-209ENST00000568569 STMND1H3BQB6 276 aa11.92□□□□□ -0.5
GTF3C1-209ENST00000568569 AGRPO00253 132 aa11.92□□□□□ -0.5
GTF3C1-209ENST00000568569 FGFR1OPO95684 399 aaKnown RBP11.92□□□□□ -0.5
GTF3C1-209ENST00000568569 GP1BBP13224 206 aa11.92□□□□□ -0.5
GTF3C1-209ENST00000568569 SLC9A1P19634 815 aa11.92□□□□□ -0.5
GTF3C1-209ENST00000568569 FLT3P36888 993 aa11.92□□□□□ -0.5
GTF3C1-209ENST00000568569 SUOXP51687 545 aa11.92□□□□□ -0.5
GTF3C1-209ENST00000568569 RAD51Q06609 339 aa11.92□□□□□ -0.5
GTF3C1-209ENST00000568569 PAK1Q13153 545 aa11.92□□□□□ -0.5
GTF3C1-209ENST00000568569 EXOC3L4Q17RC7 722 aa11.92□□□□□ -0.5
GTF3C1-209ENST00000568569 WSCD2Q2TBF2 565 aa11.92□□□□□ -0.5
GTF3C1-209ENST00000568569 MAP9Q49MG5 647 aa11.92□□□□□ -0.5
GTF3C1-209ENST00000568569 ATXN7L2Q5T6C5 722 aaPredicted RBP11.92□□□□□ -0.5
GTF3C1-209ENST00000568569 PHF19Q5T6S3 580 aa11.92□□□□□ -0.5
GTF3C1-209ENST00000568569 BORAQ6PGQ7 559 aa11.92□□□□□ -0.5
GTF3C1-209ENST00000568569 GBP6Q6ZN66 633 aa11.92□□□□□ -0.5
GTF3C1-209ENST00000568569 BNIPLQ7Z465 357 aa11.92□□□□□ -0.5
GTF3C1-209ENST00000568569 SLC47A2Q86VL8 602 aa11.92□□□□□ -0.5
GTF3C1-209ENST00000568569 SLITRK4Q8IW52 837 aa11.92□□□□□ -0.5
GTF3C1-209ENST00000568569 TMEM35BQ8NCS4 154 aa11.92□□□□□ -0.5
GTF3C1-209ENST00000568569 C18orf8Q96DM3 657 aa11.92□□□□□ -0.5
GTF3C1-209ENST00000568569 APOOQ9BUR5 198 aa11.92□□□□□ -0.5
GTF3C1-209ENST00000568569 EPN3Q9H201 632 aa11.92□□□□□ -0.5
GTF3C1-209ENST00000568569 MAGEH1Q9H213 219 aa11.92□□□□□ -0.5
GTF3C1-209ENST00000568569 RETREG1Q9H6L5 497 aa11.92□□□□□ -0.5
GTF3C1-209ENST00000568569 PLCB1Q9NQ66 1216 aa11.92□□□□□ -0.5
GTF3C1-209ENST00000568569 DKK3Q9UBP4 350 aa11.92□□□□□ -0.5
GTF3C1-209ENST00000568569 TUBD1Q9UJT1 453 aa11.92□□□□□ -0.5
GTF3C1-209ENST00000568569 ZSCAN5CA6NGD5 496 aaPredicted RBP11.91□□□□□ -0.5
GTF3C1-209ENST00000568569 NUDT21O43809 227 aaKnown RBP11.91□□□□□ -0.5
GTF3C1-209ENST00000568569 RAMP2O60895 175 aa11.91□□□□□ -0.5
GTF3C1-209ENST00000568569 TMCC1O94876 653 aa11.91□□□□□ -0.5
GTF3C1-209ENST00000568569 IGSF6O95976 241 aa11.91□□□□□ -0.5
GTF3C1-209ENST00000568569 TNFP01375 233 aa11.91□□□□□ -0.5
GTF3C1-209ENST00000568569 TIMP2P16035 220 aa11.91□□□□□ -0.5
GTF3C1-209ENST00000568569 RHOQP17081 205 aa11.91□□□□□ -0.5
GTF3C1-209ENST00000568569 ITIH2P19823 946 aa11.91□□□□□ -0.5
GTF3C1-209ENST00000568569 BMP6P22004 513 aa11.91□□□□□ -0.5
GTF3C1-209ENST00000568569 XPAP23025 273 aaPredicted RBP11.91□□□□□ -0.5
GTF3C1-209ENST00000568569 CDH5P33151 784 aaPredicted RBP11.91□□□□□ -0.5
GTF3C1-209ENST00000568569 GABRB2P47870 512 aa11.91□□□□□ -0.5
GTF3C1-209ENST00000568569 ATP1A2P50993 1020 aa11.91□□□□□ -0.5
GTF3C1-209ENST00000568569 STX17P56962 302 aa11.91□□□□□ -0.5
GTF3C1-209ENST00000568569 NRG1Q02297 640 aaPredicted RBP11.91□□□□□ -0.5
GTF3C1-209ENST00000568569 APBA1Q02410 837 aa11.91□□□□□ -0.5
GTF3C1-209ENST00000568569 ELP6Q0PNE2 266 aa11.91□□□□□ -0.5
GTF3C1-209ENST00000568569 KCNAB2Q13303 367 aa11.91□□□□□ -0.5
GTF3C1-209ENST00000568569 ARHGEF7Q14155 803 aa11.91□□□□□ -0.5
GTF3C1-209ENST00000568569 INPP5AQ14642 412 aa11.91□□□□□ -0.5
GTF3C1-209ENST00000568569 TMEM52BQ4KMG9 183 aa11.91□□□□□ -0.5
GTF3C1-209ENST00000568569 C14orf28Q4W4Y0 310 aa11.91□□□□□ -0.5
GTF3C1-209ENST00000568569 MANEALQ5VSG8 457 aa11.91□□□□□ -0.5
GTF3C1-209ENST00000568569 RWDD4Q6NW29 188 aaKnown RBP11.91□□□□□ -0.5
GTF3C1-209ENST00000568569 OGFOD3Q6PK18 319 aa11.91□□□□□ -0.5
GTF3C1-209ENST00000568569 LEKR1Q6ZMV7 388 aa11.91□□□□□ -0.5
GTF3C1-209ENST00000568569 NLRP14Q86W24 1093 aa11.91□□□□□ -0.5
GTF3C1-209ENST00000568569 XYLT1Q86Y38 959 aa11.91□□□□□ -0.5
GTF3C1-209ENST00000568569 PTRH1Q86Y79 214 aaKnown RBP11.91□□□□□ -0.5
GTF3C1-209ENST00000568569 FAM46DQ8NEK8 389 aa11.91□□□□□ -0.5
GTF3C1-209ENST00000568569 PDXPQ96GD0 296 aa11.91□□□□□ -0.5
GTF3C1-209ENST00000568569 CFAP57Q96MR6 1250 aa11.91□□□□□ -0.5
GTF3C1-209ENST00000568569 WDR92Q96MX6 357 aa11.91□□□□□ -0.5
GTF3C1-209ENST00000568569 SLC12A9Q9BXP2 914 aa11.91□□□□□ -0.5
GTF3C1-209ENST00000568569 TTYH3Q9C0H2 523 aa11.91□□□□□ -0.5
GTF3C1-209ENST00000568569 PDCL3Q9H2J4 239 aa11.91□□□□□ -0.5
GTF3C1-209ENST00000568569 NDFIP2Q9NV92 336 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms