RNA–Protein interactions for RNA: ENST00000567712.1

CNEP1R1-209, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-209ENST00000567712 ARHGEF26Q96DR7 871 aa23.17■■□□□ 1.3
CNEP1R1-209ENST00000567712 HMCESQ96FZ2 354 aa23.17■■□□□ 1.3
CNEP1R1-209ENST00000567712 EXOC2Q96KP1 924 aa23.17■■□□□ 1.3
CNEP1R1-209ENST00000567712 TBATAQ96M53 351 aa23.17■■□□□ 1.3
CNEP1R1-209ENST00000567712 GDAP1L1Q96MZ0 367 aa23.17■■□□□ 1.3
CNEP1R1-209ENST00000567712 CLSTN2Q9H4D0 955 aa23.17■■□□□ 1.3
CNEP1R1-209ENST00000567712 RETREG1Q9H6L5 497 aa23.17■■□□□ 1.3
CNEP1R1-209ENST00000567712 SYNDIG1Q9H7V2 258 aa23.17■■□□□ 1.3
CNEP1R1-209ENST00000567712 GULP1Q9UBP9 304 aa23.17■■□□□ 1.3
CNEP1R1-209ENST00000567712 LHX3Q9UBR4 397 aa23.17■■□□□ 1.3
CNEP1R1-209ENST00000567712 BSNQ9UPA5 3926 aa23.16■■□□□ 1.3
CNEP1R1-209ENST00000567712 CYSRT1A8MQ03 144 aa23.16■■□□□ 1.3
CNEP1R1-209ENST00000567712 UNGP13051 313 aaPredicted RBP23.16■■□□□ 1.3
CNEP1R1-209ENST00000567712 ERCC5P28715 1186 aaPredicted RBP23.16■■□□□ 1.3
CNEP1R1-209ENST00000567712 JAM2P57087 298 aa23.16■■□□□ 1.3
CNEP1R1-209ENST00000567712 SRSF6Q13247 344 aaKnown RBP23.16■■□□□ 1.3
CNEP1R1-209ENST00000567712 SPIDRQ14159 915 aa23.16■■□□□ 1.3
CNEP1R1-209ENST00000567712 CYTH1Q15438 398 aa23.16■■□□□ 1.3
CNEP1R1-209ENST00000567712 ALG11Q2TAA5 492 aa23.16■■□□□ 1.3
CNEP1R1-209ENST00000567712 TMEM52BQ4KMG9 183 aa23.16■■□□□ 1.3
CNEP1R1-209ENST00000567712 TCP11X2Q5H9J9 407 aa23.16■■□□□ 1.3
CNEP1R1-209ENST00000567712 HID1Q8IV36 788 aa23.16■■□□□ 1.3
CNEP1R1-209ENST00000567712 NAT6Q93015 286 aa23.16■■□□□ 1.3
CNEP1R1-209ENST00000567712 DKK3Q9UBP4 350 aa23.16■■□□□ 1.3
CNEP1R1-209ENST00000567712 MFHAS1Q9Y4C4 1052 aa23.16■■□□□ 1.3
CNEP1R1-209ENST00000567712 CCDC187A0A096LP49 1063 aa23.15■■□□□ 1.3
CNEP1R1-209ENST00000567712 A0A1W2PQM1 296 aa23.15■■□□□ 1.3
CNEP1R1-209ENST00000567712 RPIAP49247 311 aa23.15■■□□□ 1.3
CNEP1R1-209ENST00000567712 HK3P52790 923 aa23.15■■□□□ 1.3
CNEP1R1-209ENST00000567712 CCL7P80098 99 aa23.15■■□□□ 1.3
CNEP1R1-209ENST00000567712 WDR59Q6PJI9 974 aa23.15■■□□□ 1.3
CNEP1R1-209ENST00000567712 ZSWIM9Q86XI8 627 aa23.15■■□□□ 1.3
CNEP1R1-209ENST00000567712 ZNF677Q86XU0 584 aa23.15■■□□□ 1.3
CNEP1R1-209ENST00000567712 ZNF354CQ86Y25 554 aa23.15■■□□□ 1.3
CNEP1R1-209ENST00000567712 SFTPA2Q8IWL1 248 aa23.15■■□□□ 1.3
CNEP1R1-209ENST00000567712 RTL3Q8N8U3 475 aaKnown RBP23.15■■□□□ 1.3
CNEP1R1-209ENST00000567712 GLMNQ92990 594 aa23.15■■□□□ 1.3
CNEP1R1-209ENST00000567712 NTAN1Q96AB6 310 aa23.15■■□□□ 1.3
CNEP1R1-209ENST00000567712 FUBP1Q96AE4 644 aaKnown RBP23.15■■□□□ 1.3
CNEP1R1-209ENST00000567712 CCDC74AQ96AQ1 378 aa23.15■■□□□ 1.3
CNEP1R1-209ENST00000567712 FOXP3Q9BZS1 431 aa23.15■■□□□ 1.3
CNEP1R1-209ENST00000567712 GTF3C3Q9Y5Q9 886 aa23.15■■□□□ 1.3
CNEP1R1-209ENST00000567712 BOD1L1Q8NFC6 3051 aa23.14■■□□□ 1.29
CNEP1R1-209ENST00000567712 RIOK3O14730 519 aaKnown RBP23.14■■□□□ 1.29
CNEP1R1-209ENST00000567712 IGSF6O95976 241 aa23.14■■□□□ 1.29
CNEP1R1-209ENST00000567712 PRKCGP05129 697 aa23.14■■□□□ 1.29
CNEP1R1-209ENST00000567712 HGFP14210 728 aa23.14■■□□□ 1.29
CNEP1R1-209ENST00000567712 POLR2FP61218 127 aaKnown RBP23.14■■□□□ 1.29
CNEP1R1-209ENST00000567712 RHOAP61586 193 aa23.14■■□□□ 1.29
CNEP1R1-209ENST00000567712 ZSCAN23Q3MJ62 389 aa23.14■■□□□ 1.29
CNEP1R1-209ENST00000567712 ARL14Q8N4G2 192 aa23.14■■□□□ 1.29
CNEP1R1-209ENST00000567712 EDEM3Q9BZQ6 932 aa23.14■■□□□ 1.29
CNEP1R1-209ENST00000567712 NLRC4Q9NPP4 1024 aa23.14■■□□□ 1.29
CNEP1R1-209ENST00000567712 OR1A2Q9Y585 309 aa23.14■■□□□ 1.29
CNEP1R1-209ENST00000567712 B8ZZF3 427 aa23.13■■□□□ 1.29
CNEP1R1-209ENST00000567712 RASA4BC9J798 803 aa23.13■■□□□ 1.29
CNEP1R1-209ENST00000567712 RASA4O43374 803 aa23.13■■□□□ 1.29
CNEP1R1-209ENST00000567712 BUB1BO60566 1050 aaPredicted RBP23.13■■□□□ 1.29
CNEP1R1-209ENST00000567712 ITGA2BP08514 1039 aa23.13■■□□□ 1.29
CNEP1R1-209ENST00000567712 KRT3P12035 628 aa23.13■■□□□ 1.29
CNEP1R1-209ENST00000567712 C6P13671 934 aa23.13■■□□□ 1.29
CNEP1R1-209ENST00000567712 EPHB2P29323 1055 aa23.13■■□□□ 1.29
CNEP1R1-209ENST00000567712 SOX5P35711 763 aa23.13■■□□□ 1.29
CNEP1R1-209ENST00000567712 LRRC14Q15048 493 aa23.13■■□□□ 1.29
CNEP1R1-209ENST00000567712 INO80DQ53TQ3 878 aaPredicted RBP23.13■■□□□ 1.29
CNEP1R1-209ENST00000567712 ESRP1Q6NXG1 681 aaKnown RBP23.13■■□□□ 1.29
CNEP1R1-209ENST00000567712 ENPP7Q6UWV6 458 aa23.13■■□□□ 1.29
CNEP1R1-209ENST00000567712 RD3Q7Z3Z2 195 aa23.13■■□□□ 1.29
CNEP1R1-209ENST00000567712 SLFN11Q7Z7L1 901 aa23.13■■□□□ 1.29
CNEP1R1-209ENST00000567712 SDR16C5Q8N3Y7 309 aa23.13■■□□□ 1.29
CNEP1R1-209ENST00000567712 ARL10Q8N8L6 244 aa23.13■■□□□ 1.29
CNEP1R1-209ENST00000567712 COL26A1Q96A83 441 aa23.13■■□□□ 1.29
CNEP1R1-209ENST00000567712 LIN37Q96GY3 246 aaPredicted RBP23.13■■□□□ 1.29
CNEP1R1-209ENST00000567712 VPS16Q9H269 839 aa23.13■■□□□ 1.29
CNEP1R1-209ENST00000567712 PCDH12Q9NPG4 1184 aa23.13■■□□□ 1.29
CNEP1R1-209ENST00000567712 TCRBV5S1A1TA0A578 114 aa23.12■■□□□ 1.29
CNEP1R1-209ENST00000567712 ZSCAN5CA6NGD5 496 aaPredicted RBP23.12■■□□□ 1.29
CNEP1R1-209ENST00000567712 CCP110O43303 1012 aa23.12■■□□□ 1.29
CNEP1R1-209ENST00000567712 NOBOXO60393 691 aa23.12■■□□□ 1.29
CNEP1R1-209ENST00000567712 GPD1P21695 349 aa23.12■■□□□ 1.29
CNEP1R1-209ENST00000567712 SLC5A2P31639 672 aa23.12■■□□□ 1.29
CNEP1R1-209ENST00000567712 GSCP56915 257 aaPredicted RBP23.12■■□□□ 1.29
CNEP1R1-209ENST00000567712 SERINC3Q13530 473 aa23.12■■□□□ 1.29
CNEP1R1-209ENST00000567712 INPP5AQ14642 412 aa23.12■■□□□ 1.29
CNEP1R1-209ENST00000567712 TGIF1Q15583 401 aa23.12■■□□□ 1.29
CNEP1R1-209ENST00000567712 CCDC81Q6ZN84 652 aa23.12■■□□□ 1.29
CNEP1R1-209ENST00000567712 FSTL5Q8N475 847 aaPredicted RBP23.12■■□□□ 1.29
CNEP1R1-209ENST00000567712 WDR48Q8TAF3 677 aa23.12■■□□□ 1.29
CNEP1R1-209ENST00000567712 APOOQ9BUR5 198 aa23.12■■□□□ 1.29
CNEP1R1-209ENST00000567712 C1QTNF7Q9BXJ2 289 aa23.12■■□□□ 1.29
CNEP1R1-209ENST00000567712 CPEB1Q9BZB8 566 aaKnown RBP23.12■■□□□ 1.29
CNEP1R1-209ENST00000567712 EPB41L5Q9HCM4 733 aa23.12■■□□□ 1.29
CNEP1R1-209ENST00000567712 FAM207AQ9NSI2 230 aaPredicted RBP23.12■■□□□ 1.29
CNEP1R1-209ENST00000567712 TSPAN11A1L157 253 aa23.11■■□□□ 1.29
CNEP1R1-209ENST00000567712 CAPN8A6NHC0 703 aa23.11■■□□□ 1.29
CNEP1R1-209ENST00000567712 D6RAR5 112 aa23.11■■□□□ 1.29
CNEP1R1-209ENST00000567712 AGRPO00253 132 aa23.11■■□□□ 1.29
CNEP1R1-209ENST00000567712 TOR1BO14657 336 aa23.11■■□□□ 1.29
CNEP1R1-209ENST00000567712 PLD2O14939 933 aa23.11■■□□□ 1.29
CNEP1R1-209ENST00000567712 CREB3O43889 395 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms