RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 UPK3BL1B0FP48 263 aa12.52□□□□□ -0.41
RNF40-211ENST00000567365 UPK3BL2E5RIL1 263 aa12.52□□□□□ -0.41
RNF40-211ENST00000567365 WNT9AO14904 365 aa12.52□□□□□ -0.41
RNF40-211ENST00000567365 FSBPO95073 299 aa12.52□□□□□ -0.41
RNF40-211ENST00000567365 SERPINF2P08697 491 aa12.52□□□□□ -0.41
RNF40-211ENST00000567365 CES1P23141 567 aa12.52□□□□□ -0.41
RNF40-211ENST00000567365 PTPN3P26045 913 aa12.52□□□□□ -0.41
RNF40-211ENST00000567365 SERPINA4P29622 427 aa12.52□□□□□ -0.41
RNF40-211ENST00000567365 NUDT1P36639 197 aa12.52□□□□□ -0.41
RNF40-211ENST00000567365 IRX4P78413 519 aa12.52□□□□□ -0.41
RNF40-211ENST00000567365 BCL2L1Q07817 233 aa12.52□□□□□ -0.41
RNF40-211ENST00000567365 DUOXA1Q1HG43 343 aa12.52□□□□□ -0.41
RNF40-211ENST00000567365 TMEM52BQ4KMG9 183 aa12.52□□□□□ -0.41
RNF40-211ENST00000567365 TEX44Q53QW1 395 aa12.52□□□□□ -0.41
RNF40-211ENST00000567365 FBXL19Q6PCT2 694 aa12.52□□□□□ -0.41
RNF40-211ENST00000567365 B4GALNT4Q76KP1 1039 aa12.52□□□□□ -0.41
RNF40-211ENST00000567365 BBS5Q8N3I7 341 aa12.52□□□□□ -0.41
RNF40-211ENST00000567365 ZCCHC9Q8N567 271 aaKnown RBP12.52□□□□□ -0.41
RNF40-211ENST00000567365 TMEM145Q8NBT3 493 aa12.52□□□□□ -0.41
RNF40-211ENST00000567365 CCNYQ8ND76 341 aa12.52□□□□□ -0.41
RNF40-211ENST00000567365 CEP76Q8TAP6 659 aa12.52□□□□□ -0.41
RNF40-211ENST00000567365 TFB1MQ8WVM0 346 aaKnown RBP12.52□□□□□ -0.41
RNF40-211ENST00000567365 ANP32BQ92688 251 aaKnown RBP12.52□□□□□ -0.41
RNF40-211ENST00000567365 P3H4Q92791 437 aa12.52□□□□□ -0.41
RNF40-211ENST00000567365 TEKT5Q96M29 485 aa12.52□□□□□ -0.41
RNF40-211ENST00000567365 SEMA3CQ99985 751 aa12.52□□□□□ -0.41
RNF40-211ENST00000567365 HINFPQ9BQA5 517 aa12.52□□□□□ -0.41
RNF40-211ENST00000567365 C1QTNF2Q9BXJ5 285 aa12.52□□□□□ -0.41
RNF40-211ENST00000567365 CARD9Q9H257 536 aa12.52□□□□□ -0.41
RNF40-211ENST00000567365 TM9SF3Q9HD45 589 aa12.52□□□□□ -0.41
RNF40-211ENST00000567365 ITM2BQ9Y287 266 aa12.52□□□□□ -0.41
RNF40-211ENST00000567365 PPIL1Q9Y3C6 166 aa12.52□□□□□ -0.41
RNF40-211ENST00000567365 PCDHGC4Q9Y5F7 938 aa12.52□□□□□ -0.41
RNF40-211ENST00000567365 ADAMTS9Q9P2N4 1935 aa12.52□□□□□ -0.41
RNF40-211ENST00000567365 TP53BP1Q12888 1972 aaPredicted RBP12.51□□□□□ -0.41
RNF40-211ENST00000567365 TBC1D3DA0A087WVF3 549 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 TBC1D3IA0A087WXS9 549 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 TBC1D3EA0A087X179 549 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 TBC1D3KA0A087X1G2 549 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 A0A1B0GTW7 788 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 A0A1W2PR77 199 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 TBC1D3FA6NER0 549 aaPredicted RBP12.51□□□□□ -0.41
RNF40-211ENST00000567365 HACD1B0YJ81 288 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 TBC1D3LB9A6J9 549 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 RIOK3O14730 519 aaKnown RBP12.51□□□□□ -0.41
RNF40-211ENST00000567365 BCAT2O15382 392 aaPredicted RBP12.51□□□□□ -0.41
RNF40-211ENST00000567365 TSPAN6O43657 245 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 FOXD2O60548 495 aaPredicted RBP12.51□□□□□ -0.41
RNF40-211ENST00000567365 RNGTTO60942 597 aaKnown RBP12.51□□□□□ -0.41
RNF40-211ENST00000567365 TJP3O95049 919 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 PGLSO95336 258 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 PRLP01236 227 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 TBC1D3HP0C7X1 549 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 CD68P34810 354 aaPredicted RBP12.51□□□□□ -0.41
RNF40-211ENST00000567365 MMP12P39900 470 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 SKOR1P84550 965 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 OTUD4Q01804 1114 aaKnown RBP12.51□□□□□ -0.41
RNF40-211ENST00000567365 DSC2Q02487 901 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 AP1B1Q10567 949 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 RALGDSQ12967 914 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 PUM1Q14671 1186 aaKnown RBP eCLIP12.51□□□□□ -0.414e-6■■□□□ 11.7
RNF40-211ENST00000567365 RPS6KA1Q15418 735 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 SLC14A2Q15849 920 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 SLC45A4Q5BKX6 768 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 TRIM61Q5EBN2 209 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 LRRC73Q5JTD7 316 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 SEL1L3Q68CR1 1132 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 TBC1D3GQ6DHY5 549 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 TBC1D3CQ6IPX1 549 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 KIAA1161Q6NSJ0 714 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 RABEPKQ7Z6M1 372 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 TTC7BQ86TV6 843 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 PRPF39Q86UA1 669 aaKnown RBP12.51□□□□□ -0.41
RNF40-211ENST00000567365 ZSCAN30Q86W11 494 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 RGL4Q8IZJ4 473 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 TBC1D3Q8IZP1 549 aaPredicted RBP12.51□□□□□ -0.41
RNF40-211ENST00000567365 CBARPQ8N350 705 aaPredicted RBP12.51□□□□□ -0.41
RNF40-211ENST00000567365 SLC35B2Q8TB61 432 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 PIH1D2Q8WWB5 315 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 ASB12Q8WXK4 309 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 HAUS1Q96CS2 278 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 IMP4Q96G21 291 aaKnown RBP12.51□□□□□ -0.41
RNF40-211ENST00000567365 MCCC1Q96RQ3 725 aaPredicted RBP12.51□□□□□ -0.41
RNF40-211ENST00000567365 KLF6Q99612 283 aaPredicted RBP12.51□□□□□ -0.41
RNF40-211ENST00000567365 PCDH12Q9NPG4 1184 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 SCUBE2Q9NQ36 999 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 SUSD2Q9UGT4 822 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 SLC6A14Q9UN76 642 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 DMTF1Q9Y222 760 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.51□□□□□ -0.41
RNF40-211ENST00000567365 CABIN1Q9Y6J0 2220 aa12.51□□□□□ -0.41
RNF40-211ENST00000567365 A0A1W2PQ67 120 aa12.5□□□□□ -0.41
RNF40-211ENST00000567365 CFAP69A5D8W1 941 aa12.5□□□□□ -0.41
RNF40-211ENST00000567365 USP27XA6NNY8 438 aa12.5□□□□□ -0.41
RNF40-211ENST00000567365 KHNYNO15037 678 aaKnown RBP12.5□□□□□ -0.41
RNF40-211ENST00000567365 WNT1P04628 370 aa12.5□□□□□ -0.41
RNF40-211ENST00000567365 GM2AP17900 193 aa12.5□□□□□ -0.41
RNF40-211ENST00000567365 GRIA4P48058 902 aa12.5□□□□□ -0.41
RNF40-211ENST00000567365 LIMK1P53667 647 aa12.5□□□□□ -0.41
RNF40-211ENST00000567365 RPS21P63220 83 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms