RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 BFSP2Q13515 415 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 ZNF786Q8N393 782 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 KCTD13Q8WZ19 329 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 DCUN1D1Q96GG9 259 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 OR52B2Q96RD2 323 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 C17orf80Q9BSJ5 609 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 HAUS8Q9BT25 410 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 STN1Q9H668 368 aaKnown RBP11.67□□□□□ -0.54
CDH1-210ENST00000566612 SLC8A2Q9UPR5 921 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 TCAF1Q9Y4C2 921 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 ARHGAP10A1A4S6 786 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 IRAK2O43187 625 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 PGM3O95394 542 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 AHSGP02765 367 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 WEE1P30291 646 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 OR1D2P34982 312 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 CRHR2Q13324 411 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 PHTF2Q8N3S3 785 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 FNDC5Q8NAU1 212 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 SPDYE1Q8NFV5 336 aaPredicted RBP11.67□□□□□ -0.54
CDH1-210ENST00000566612 OR6K2Q8NGY2 324 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 METTL6Q8TCB7 284 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 UROC1Q96N76 676 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 GPBP1L1Q9HC44 474 aaPredicted RBP11.67□□□□□ -0.54
CDH1-210ENST00000566612 PAPOLBQ9NRJ5 636 aaKnown RBP11.67□□□□□ -0.54
CDH1-210ENST00000566612 GTF2IRD1Q9UHL9 959 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 LNPEPQ9UIQ6 1025 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 VPS9D1Q9Y2B5 631 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 NDUFAF1Q9Y375 327 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 UBR3Q6ZT12 1888 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 SYCE1LA8MT33 242 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 KCNU1A8MYU2 1149 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 PTGESO14684 152 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 MAGEC1O60732 1142 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 CLASP2O75122 1294 aaKnown RBP11.67□□□□□ -0.54
CDH1-210ENST00000566612 SLC1A2P43004 574 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 ELAVL2Q12926 359 aaKnown RBP11.67□□□□□ -0.54
CDH1-210ENST00000566612 PAFAH1B3Q15102 231 aaKnown RBP11.67□□□□□ -0.54
CDH1-210ENST00000566612 TBCELQ5QJ74 424 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 HECTD2Q5U5R9 776 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 DNAJC14Q6Y2X3 702 aaPredicted RBP11.67□□□□□ -0.54
CDH1-210ENST00000566612 SLC24A5Q71RS6 500 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 RP9Q8TA86 221 aaKnown RBP11.67□□□□□ -0.54
CDH1-210ENST00000566612 PPP1R10Q96QC0 940 aaKnown RBP11.67□□□□□ -0.54
CDH1-210ENST00000566612 CD3EAPO15446 510 aaKnown RBP11.66□□□□□ -0.54
CDH1-210ENST00000566612 SYNCRIPO60506 623 aaKnown RBP11.66□□□□□ -0.54
CDH1-210ENST00000566612 SMNDC1O75940 238 aaKnown RBP eCLIP11.66□□□□□ -0.54
CDH1-210ENST00000566612 OAS1P00973 400 aaKnown RBP11.66□□□□□ -0.54
CDH1-210ENST00000566612 HLA-DQB2P05538 268 aa11.66□□□□□ -0.54
CDH1-210ENST00000566612 PSMA4P25789 261 aaKnown RBP11.66□□□□□ -0.54
CDH1-210ENST00000566612 GPR15P49685 360 aa11.66□□□□□ -0.54
CDH1-210ENST00000566612 RPS27LQ71UM5 84 aaKnown RBP11.66□□□□□ -0.54
CDH1-210ENST00000566612 AMIGO2Q86SJ2 522 aa11.66□□□□□ -0.54
CDH1-210ENST00000566612 CUZD1Q86UP6 607 aa11.66□□□□□ -0.54
CDH1-210ENST00000566612 DHFR2Q86XF0 187 aa11.66□□□□□ -0.54
CDH1-210ENST00000566612 DSELQ8IZU8 1212 aa11.66□□□□□ -0.54
CDH1-210ENST00000566612 FBXW8Q8N3Y1 598 aa11.66□□□□□ -0.54
CDH1-210ENST00000566612 OR7D4Q8NG98 312 aa11.66□□□□□ -0.54
CDH1-210ENST00000566612 IRGQQ8WZA9 623 aa11.66□□□□□ -0.54
CDH1-210ENST00000566612 PRPF18Q99633 342 aaKnown RBP11.66□□□□□ -0.54
CDH1-210ENST00000566612 HGH1Q9BTY7 390 aa11.66□□□□□ -0.54
CDH1-210ENST00000566612 SLC25A23Q9BV35 468 aa11.66□□□□□ -0.54
CDH1-210ENST00000566612 SIRPGQ9P1W8 387 aa11.66□□□□□ -0.54
CDH1-210ENST00000566612 TRAF6Q9Y4K3 522 aa11.66□□□□□ -0.54
CDH1-210ENST00000566612 CAPN8A6NHC0 703 aa11.66□□□□□ -0.54
CDH1-210ENST00000566612 TMEM233B4DJY2 109 aa11.66□□□□□ -0.54
CDH1-210ENST00000566612 CCNT2O60583 730 aaKnown RBP11.66□□□□□ -0.54
CDH1-210ENST00000566612 LINC00032P0C843 101 aa11.66□□□□□ -0.54
CDH1-210ENST00000566612 ZNF23P17027 643 aa11.66□□□□□ -0.54
CDH1-210ENST00000566612 RPL17P18621 184 aaKnown RBP11.66□□□□□ -0.54
CDH1-210ENST00000566612 KPNA1P52294 538 aaPredicted RBP11.66□□□□□ -0.54
CDH1-210ENST00000566612 PRKCZQ05513 592 aa11.66□□□□□ -0.54
CDH1-210ENST00000566612 SLC10A7Q0GE19 358 aa11.66□□□□□ -0.54
CDH1-210ENST00000566612 ARHGEF7Q14155 803 aa11.66□□□□□ -0.54
CDH1-210ENST00000566612 VARS2Q5ST30 1063 aaKnown RBP11.66□□□□□ -0.54
CDH1-210ENST00000566612 WLSQ5T9L3 541 aa11.66□□□□□ -0.54
CDH1-210ENST00000566612 TPGS1Q6ZTW0 290 aa11.66□□□□□ -0.54
CDH1-210ENST00000566612 PNPLA1Q8N8W4 532 aa11.66□□□□□ -0.54
CDH1-210ENST00000566612 S100A14Q9HCY8 104 aa11.66□□□□□ -0.54
CDH1-210ENST00000566612 ATXN8OSP0DMR3 200 aa11.66□□□□□ -0.54
CDH1-210ENST00000566612 RALGDSQ12967 914 aa11.66□□□□□ -0.54
CDH1-210ENST00000566612 MSLNQ13421 630 aaPredicted RBP11.66□□□□□ -0.54
CDH1-210ENST00000566612 THEMIS2Q5TEJ8 643 aa11.66□□□□□ -0.54
CDH1-210ENST00000566612 RTL3Q8N8U3 475 aaKnown RBP11.66□□□□□ -0.54
CDH1-210ENST00000566612 DNAJB14Q8TBM8 379 aa11.66□□□□□ -0.54
CDH1-210ENST00000566612 UCMAQ8WVF2 138 aa11.66□□□□□ -0.54
CDH1-210ENST00000566612 BTN2A3PQ96KV6 586 aa11.66□□□□□ -0.54
CDH1-210ENST00000566612 ZNF570Q96NI8 536 aa11.66□□□□□ -0.54
CDH1-210ENST00000566612 CYP2S1Q96SQ9 504 aa11.66□□□□□ -0.54
CDH1-210ENST00000566612 EBF2Q9HAK2 575 aa11.66□□□□□ -0.54
CDH1-210ENST00000566612 SF3B1O75533 1304 aaKnown RBP eCLIP11.65□□□□□ -0.54
CDH1-210ENST00000566612 DPPA5A6NC42 116 aa11.65□□□□□ -0.54
CDH1-210ENST00000566612 ZNF839A8K0R7 811 aa11.65□□□□□ -0.54
CDH1-210ENST00000566612 J3KR12 359 aa11.65□□□□□ -0.54
CDH1-210ENST00000566612 KLF11O14901 512 aa11.65□□□□□ -0.54
CDH1-210ENST00000566612 TP73O15350 636 aa11.65□□□□□ -0.54
CDH1-210ENST00000566612 SNRPB2P08579 225 aaKnown RBP11.65□□□□□ -0.54
CDH1-210ENST00000566612 HGFP14210 728 aa11.65□□□□□ -0.54
CDH1-210ENST00000566612 CTPS1P17812 591 aa11.65□□□□□ -0.54
CDH1-210ENST00000566612 GRIA3P42263 894 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms