RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 CXCR3P49682 368 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 TECRLQ5HYJ1 363 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 MARCH8Q5T0T0 291 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 FAM72AQ5TYM5 149 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 FAM72DQ6L9T8 149 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 FAM72BQ86X60 149 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 TP53INP2Q8IXH6 220 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 LZTR1Q8N653 840 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 TXNDC5Q8NBS9 432 aaKnown RBP21.76■■□□□ 1.07
SPSB3-208ENST00000566339 OR2T34Q8NGX1 318 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 OR2T3Q8NH03 318 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 GTF3C2Q8WUA4 911 aaPredicted RBP21.76■■□□□ 1.07
SPSB3-208ENST00000566339 LRTOMTQ8WZ04 291 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 SLCO4A1Q96BD0 722 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 DNAJC1Q96KC8 554 aaKnown RBP21.76■■□□□ 1.07
SPSB3-208ENST00000566339 OSBPL2Q9H1P3 480 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 TMPRSS4Q9NRS4 437 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 DNAAF2Q9NVR5 837 aaKnown RBP21.76■■□□□ 1.07
SPSB3-208ENST00000566339 LMCD1Q9NZU5 365 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 MTF2Q9Y483 593 aaPredicted RBP21.76■■□□□ 1.07
SPSB3-208ENST00000566339 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.76■■□□□ 1.07
SPSB3-208ENST00000566339 COL4A4P53420 1690 aaPredicted RBP21.76■■□□□ 1.07
SPSB3-208ENST00000566339 GABRDO14764 452 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 MRASO14807 208 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 AOC2O75106 756 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 FYNP06241 537 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 ABCG1P45844 678 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 CCR10P46092 362 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 GLRBP48167 497 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 CLCN5P51795 746 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 BNIP2Q12982 314 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 NHSL2Q5HYW2 709 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 RAB41Q5JT25 222 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 RWDD4Q6NW29 188 aaKnown RBP21.76■■□□□ 1.07
SPSB3-208ENST00000566339 PAQR9Q6ZVX9 377 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 DHFR2Q86XF0 187 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 SCML4Q8N228 414 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 BBS5Q8N3I7 341 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 RNF148Q8N7C7 305 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 TFAP2CQ92754 450 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.76■■□□□ 1.074e-13■■■■■ 88.3
SPSB3-208ENST00000566339 RANBP9Q96S59 729 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 TRIM62Q9BVG3 475 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 YTHDF1Q9BYJ9 559 aaKnown RBP21.76■■□□□ 1.07
SPSB3-208ENST00000566339 GTSE1Q9NYZ3 720 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 CDH7Q9ULB5 785 aa21.76■■□□□ 1.07
SPSB3-208ENST00000566339 FBP2O00757 339 aa21.75■■□□□ 1.07
SPSB3-208ENST00000566339 HCRTO43612 131 aa21.75■■□□□ 1.07
SPSB3-208ENST00000566339 IPO13O94829 963 aaKnown RBP21.75■■□□□ 1.07
SPSB3-208ENST00000566339 JCHAINP01591 159 aa21.75■■□□□ 1.07
SPSB3-208ENST00000566339 PCSK6P29122 969 aa21.75■■□□□ 1.07
SPSB3-208ENST00000566339 SMAD1Q15797 465 aaKnown RBP21.75■■□□□ 1.07
SPSB3-208ENST00000566339 ZBED5Q49AG3 693 aa21.75■■□□□ 1.07
SPSB3-208ENST00000566339 OLFML2BQ68BL8 750 aa21.75■■□□□ 1.07
SPSB3-208ENST00000566339 ZBTB49Q6ZSB9 765 aa21.75■■□□□ 1.07
SPSB3-208ENST00000566339 BEND5Q7L4P6 421 aa21.75■■□□□ 1.07
SPSB3-208ENST00000566339 OSTM1Q86WC4 334 aa21.75■■□□□ 1.07
SPSB3-208ENST00000566339 CAMK1DQ8IU85 385 aa21.75■■□□□ 1.07
SPSB3-208ENST00000566339 ANKRD13AQ8IZ07 590 aa21.75■■□□□ 1.07
SPSB3-208ENST00000566339 ZNF420Q8TAQ5 688 aaPredicted RBP21.75■■□□□ 1.07
SPSB3-208ENST00000566339 SLC45A3Q96JT2 553 aa21.75■■□□□ 1.07
SPSB3-208ENST00000566339 PPP1R36Q96LQ0 422 aa21.75■■□□□ 1.07
SPSB3-208ENST00000566339 IL12RB2Q99665 862 aa21.75■■□□□ 1.07
SPSB3-208ENST00000566339 EIF2AQ9BY44 585 aaKnown RBP21.75■■□□□ 1.07
SPSB3-208ENST00000566339 CD320Q9NPF0 282 aa21.75■■□□□ 1.07
SPSB3-208ENST00000566339 TREX1Q9NSU2 369 aa21.75■■□□□ 1.07
SPSB3-208ENST00000566339 CCM2LQ9NUG4 571 aaPredicted RBP21.75■■□□□ 1.07
SPSB3-208ENST00000566339 CNOT6Q9ULM6 557 aaKnown RBP21.75■■□□□ 1.07
SPSB3-208ENST00000566339 PRORSD1PA6NEY8 169 aa21.74■■□□□ 1.07
SPSB3-208ENST00000566339 TPH1P17752 444 aa21.74■■□□□ 1.07
SPSB3-208ENST00000566339 MYF6P23409 242 aa21.74■■□□□ 1.07
SPSB3-208ENST00000566339 MSX2P35548 267 aaPredicted RBP21.74■■□□□ 1.07
SPSB3-208ENST00000566339 NME5P56597 212 aa21.74■■□□□ 1.07
SPSB3-208ENST00000566339 ACAP2Q15057 778 aa21.74■■□□□ 1.07
SPSB3-208ENST00000566339 CYTH1Q15438 398 aa21.74■■□□□ 1.07
SPSB3-208ENST00000566339 AGKQ53H12 422 aa21.74■■□□□ 1.07
SPSB3-208ENST00000566339 COQ5Q5HYK3 327 aa21.74■■□□□ 1.07
SPSB3-208ENST00000566339 CNSTQ6PJW8 725 aa21.74■■□□□ 1.07
SPSB3-208ENST00000566339 ZNF467Q7Z7K2 595 aaPredicted RBP21.74■■□□□ 1.07
SPSB3-208ENST00000566339 LRRC49Q8IUZ0 686 aa21.74■■□□□ 1.07
SPSB3-208ENST00000566339 CEP97Q8IW35 865 aa21.74■■□□□ 1.07
SPSB3-208ENST00000566339 HMGCLL1Q8TB92 370 aa21.74■■□□□ 1.07
SPSB3-208ENST00000566339 ADAM32Q8TC27 787 aa21.74■■□□□ 1.07
SPSB3-208ENST00000566339 FNDC8Q8TC99 324 aa21.74■■□□□ 1.07
SPSB3-208ENST00000566339 ELMO2Q96JJ3 720 aa21.74■■□□□ 1.07
SPSB3-208ENST00000566339 HHIPL1Q96JK4 782 aa21.74■■□□□ 1.07
SPSB3-208ENST00000566339 COLEC11Q9BWP8 271 aa21.74■■□□□ 1.07
SPSB3-208ENST00000566339 CXCL16Q9H2A7 254 aa21.74■■□□□ 1.07
SPSB3-208ENST00000566339 IGSF5Q9NSI5 407 aa21.74■■□□□ 1.07
SPSB3-208ENST00000566339 NDUFAF1Q9Y375 327 aa21.74■■□□□ 1.07
SPSB3-208ENST00000566339 PTCH2Q9Y6C5 1203 aa21.74■■□□□ 1.07
SPSB3-208ENST00000566339 SYNJ2BP-COX16A0A087WUM0 186 aa21.74■■□□□ 1.07
SPSB3-208ENST00000566339 LTA4HP09960 611 aaKnown RBP21.74■■□□□ 1.07
SPSB3-208ENST00000566339 TAS2R39P59534 338 aa21.74■■□□□ 1.07
SPSB3-208ENST00000566339 STX1BP61266 288 aa21.74■■□□□ 1.07
SPSB3-208ENST00000566339 FOXM1Q08050 763 aa21.74■■□□□ 1.07
SPSB3-208ENST00000566339 INPP5AQ14642 412 aa21.74■■□□□ 1.07
SPSB3-208ENST00000566339 MAP7D1Q3KQU3 841 aa21.74■■□□□ 1.07
SPSB3-208ENST00000566339 C6orf10Q5SRN2 563 aa21.74■■□□□ 1.07
SPSB3-208ENST00000566339 PAOXQ6QHF9 649 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms