RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 LRRC49Q8IUZ0 686 aa15.33■□□□□ 0.04
CMTM3-212ENST00000566121 ARHGAP12Q8IWW6 846 aa15.33■□□□□ 0.04
CMTM3-212ENST00000566121 TP53I13Q8NBR0 393 aaPredicted RBP15.33■□□□□ 0.04
CMTM3-212ENST00000566121 OR6K2Q8NGY2 324 aa15.33■□□□□ 0.04
CMTM3-212ENST00000566121 CXorf40AQ8TE69 158 aa15.33■□□□□ 0.04
CMTM3-212ENST00000566121 NAP1L5Q96NT1 182 aaPredicted RBP15.33■□□□□ 0.04
CMTM3-212ENST00000566121 PSKH2Q96QS6 385 aa15.33■□□□□ 0.04
CMTM3-212ENST00000566121 BOCQ9BWV1 1114 aa15.33■□□□□ 0.04
CMTM3-212ENST00000566121 KCTD5Q9NXV2 234 aa15.33■□□□□ 0.04
CMTM3-212ENST00000566121 SPASTQ9UBP0 616 aa15.33■□□□□ 0.04
CMTM3-212ENST00000566121 IPO11Q9UI26 975 aaKnown RBP15.33■□□□□ 0.04
CMTM3-212ENST00000566121 KLF15Q9UIH9 416 aa15.33■□□□□ 0.04
CMTM3-212ENST00000566121 BAHCC1Q9P281 2608 aa15.33■□□□□ 0.04
CMTM3-212ENST00000566121 FAM170AA1A519 330 aa15.32■□□□□ 0.04
CMTM3-212ENST00000566121 EEF2KO00418 725 aaKnown RBP15.32■□□□□ 0.04
CMTM3-212ENST00000566121 PRPSAP2O60256 369 aa15.32■□□□□ 0.04
CMTM3-212ENST00000566121 LRCH4O75427 683 aa15.32■□□□□ 0.04
CMTM3-212ENST00000566121 ERCC2P18074 760 aa15.32■□□□□ 0.04
CMTM3-212ENST00000566121 MIPP30301 263 aa15.32■□□□□ 0.04
CMTM3-212ENST00000566121 HSPA9P38646 679 aaKnown RBP15.32■□□□□ 0.04
CMTM3-212ENST00000566121 PBX1P40424 430 aa15.32■□□□□ 0.04
CMTM3-212ENST00000566121 EIF2S3P41091 472 aaKnown RBP15.32■□□□□ 0.04
CMTM3-212ENST00000566121 PAPOLAP51003 745 aaKnown RBP15.32■□□□□ 0.04
CMTM3-212ENST00000566121 RENBPP51606 427 aa15.32■□□□□ 0.04
CMTM3-212ENST00000566121 DAB2P98082 770 aa15.32■□□□□ 0.04
CMTM3-212ENST00000566121 KLHL30Q0D2K2 578 aa15.32■□□□□ 0.04
CMTM3-212ENST00000566121 DPYSQ14117 519 aa15.32■□□□□ 0.04
CMTM3-212ENST00000566121 RALGPS1Q5JS13 557 aa15.32■□□□□ 0.04
CMTM3-212ENST00000566121 FSTL5Q8N475 847 aaPredicted RBP15.32■□□□□ 0.04
CMTM3-212ENST00000566121 NIPA2Q8N8Q9 360 aa15.32■□□□□ 0.04
CMTM3-212ENST00000566121 GLMNQ92990 594 aa15.32■□□□□ 0.04
CMTM3-212ENST00000566121 MYOCQ99972 504 aa15.32■□□□□ 0.04
CMTM3-212ENST00000566121 SNRNP25Q9BV90 132 aaKnown RBP15.32■□□□□ 0.04
CMTM3-212ENST00000566121 SLC39A8Q9C0K1 460 aa15.32■□□□□ 0.04
CMTM3-212ENST00000566121 ATP13A3Q9H7F0 1226 aa15.32■□□□□ 0.04
CMTM3-212ENST00000566121 CNOT8Q9UFF9 292 aaKnown RBP15.32■□□□□ 0.04
CMTM3-212ENST00000566121 CFAP46Q8IYW2 2715 aa15.31■□□□□ 0.04
CMTM3-212ENST00000566121 TDRD6O60522 2096 aaKnown RBP15.31■□□□□ 0.04
CMTM3-212ENST00000566121 J3KR12 359 aa15.31■□□□□ 0.04
CMTM3-212ENST00000566121 BUB1BO60566 1050 aaPredicted RBP15.31■□□□□ 0.04
CMTM3-212ENST00000566121 MMP20O60882 483 aa15.31■□□□□ 0.04
CMTM3-212ENST00000566121 TCEA3O75764 348 aa15.31■□□□□ 0.04
CMTM3-212ENST00000566121 JUNDP17535 347 aa15.31■□□□□ 0.04
CMTM3-212ENST00000566121 IGFALSP35858 605 aa15.31■□□□□ 0.04
CMTM3-212ENST00000566121 MMP12P39900 470 aa15.31■□□□□ 0.04
CMTM3-212ENST00000566121 RPIAP49247 311 aa15.31■□□□□ 0.04
CMTM3-212ENST00000566121 THOP1P52888 689 aa15.31■□□□□ 0.04
CMTM3-212ENST00000566121 AP1S1P61966 158 aa15.31■□□□□ 0.04
CMTM3-212ENST00000566121 PIGHQ14442 188 aaPredicted RBP15.31■□□□□ 0.04
CMTM3-212ENST00000566121 LRRC14Q15048 493 aa15.31■□□□□ 0.04
CMTM3-212ENST00000566121 CA9Q16790 459 aa15.31■□□□□ 0.04
CMTM3-212ENST00000566121 HGSNATQ68CP4 663 aa15.31■□□□□ 0.04
CMTM3-212ENST00000566121 ERAP2Q6P179 960 aa15.31■□□□□ 0.04
CMTM3-212ENST00000566121 SRLQ86TD4 932 aa15.31■□□□□ 0.04
CMTM3-212ENST00000566121 ZNF354CQ86Y25 554 aa15.31■□□□□ 0.04
CMTM3-212ENST00000566121 MARCH9Q86YJ5 346 aa15.31■□□□□ 0.04
CMTM3-212ENST00000566121 ATL2Q8NHH9 583 aa15.31■□□□□ 0.04
CMTM3-212ENST00000566121 TEKT4Q8WW24 435 aa15.31■□□□□ 0.04
CMTM3-212ENST00000566121 FGF11Q92914 225 aa15.31■□□□□ 0.04
CMTM3-212ENST00000566121 DEPDC7Q96QD5 511 aa15.31■□□□□ 0.04
CMTM3-212ENST00000566121 PEBP4Q96S96 227 aa15.31■□□□□ 0.04
CMTM3-212ENST00000566121 KCTD15Q96SI1 283 aaPredicted RBP15.31■□□□□ 0.04
CMTM3-212ENST00000566121 DHX35Q9H5Z1 703 aaKnown RBP15.31■□□□□ 0.04
CMTM3-212ENST00000566121 ZWILCHQ9H900 591 aa15.31■□□□□ 0.04
CMTM3-212ENST00000566121 GGT7Q9UJ14 662 aa15.31■□□□□ 0.04
CMTM3-212ENST00000566121 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.3■□□□□ 0.04
CMTM3-212ENST00000566121 TRAFD1O14545 582 aaPredicted RBP15.3■□□□□ 0.04
CMTM3-212ENST00000566121 SERPINA4P29622 427 aa15.3■□□□□ 0.04
CMTM3-212ENST00000566121 ACTN2P35609 894 aa15.3■□□□□ 0.04
CMTM3-212ENST00000566121 TRIM23P36406 574 aa15.3■□□□□ 0.04
CMTM3-212ENST00000566121 EIF4A3P38919 411 aaKnown RBP15.3■□□□□ 0.04
CMTM3-212ENST00000566121 MLLT3P42568 568 aaPredicted RBP15.3■□□□□ 0.04
CMTM3-212ENST00000566121 LSSP48449 732 aa15.3■□□□□ 0.04
CMTM3-212ENST00000566121 ERVPABLB-1P60509 514 aa15.3■□□□□ 0.04
CMTM3-212ENST00000566121 MTM1Q13496 603 aa15.3■□□□□ 0.04
CMTM3-212ENST00000566121 KLHL40Q2TBA0 621 aa15.3■□□□□ 0.04
CMTM3-212ENST00000566121 WSCD2Q2TBF2 565 aa15.3■□□□□ 0.04
CMTM3-212ENST00000566121 CCDC157Q569K6 752 aa15.3■□□□□ 0.04
CMTM3-212ENST00000566121 TPRG1LQ5T0D9 272 aa15.3■□□□□ 0.04
CMTM3-212ENST00000566121 E4F1Q66K89 784 aaPredicted RBP15.3■□□□□ 0.04
CMTM3-212ENST00000566121 LEKR1Q6ZMV7 388 aa15.3■□□□□ 0.04
CMTM3-212ENST00000566121 PDZD3Q86UT5 571 aa15.3■□□□□ 0.04
CMTM3-212ENST00000566121 CBARPQ8N350 705 aaPredicted RBP15.3■□□□□ 0.04
CMTM3-212ENST00000566121 LSM14AQ8ND56 463 aaKnown RBP15.3■□□□□ 0.04
CMTM3-212ENST00000566121 OR6C4Q8NGE1 309 aa15.3■□□□□ 0.04
CMTM3-212ENST00000566121 FAM71BQ8TC56 605 aa15.3■□□□□ 0.04
CMTM3-212ENST00000566121 NAT6Q93015 286 aa15.3■□□□□ 0.04
CMTM3-212ENST00000566121 ZNF578Q96N58 590 aaPredicted RBP15.3■□□□□ 0.04
CMTM3-212ENST00000566121 IL12RB2Q99665 862 aa15.3■□□□□ 0.04
CMTM3-212ENST00000566121 SLC13A1Q9BZW2 595 aa15.3■□□□□ 0.04
CMTM3-212ENST00000566121 PCDH12Q9NPG4 1184 aa15.3■□□□□ 0.04
CMTM3-212ENST00000566121 CWC15Q9P013 229 aaKnown RBP15.3■□□□□ 0.04
CMTM3-212ENST00000566121 RCOR3Q9P2K3 495 aaPredicted RBP15.3■□□□□ 0.04
CMTM3-212ENST00000566121 ITM2BQ9Y287 266 aa15.3■□□□□ 0.04
CMTM3-212ENST00000566121 ATP8A1Q9Y2Q0 1164 aa15.3■□□□□ 0.04
CMTM3-212ENST00000566121 DGKBQ9Y6T7 804 aa15.3■□□□□ 0.04
CMTM3-212ENST00000566121 MGAQ8IWI9 3026 aa15.3■□□□□ 0.04
CMTM3-212ENST00000566121 HELZ2Q9BYK8 2649 aaKnown RBP15.3■□□□□ 0.04
CMTM3-212ENST00000566121 MYLKQ15746 1914 aa15.29■□□□□ 0.04
CMTM3-212ENST00000566121 TNFRSF10CO14798 259 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms