RNA–Protein interactions for RNA: ENST00000566104.1

TRADD-204, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 669 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-204ENST00000566104 TMCO4Q5TGY1 634 aa20.13■□□□□ 0.81
TRADD-204ENST00000566104 ALKBH5Q6P6C2 394 aaKnown RBP20.13■□□□□ 0.81
TRADD-204ENST00000566104 TMCO3Q6UWJ1 677 aa20.13■□□□□ 0.81
TRADD-204ENST00000566104 PAF1Q8N7H5 531 aa20.13■□□□□ 0.81
TRADD-204ENST00000566104 BTN2A2Q8WVV5 523 aa20.13■□□□□ 0.81
TRADD-204ENST00000566104 HSPH1Q92598 858 aa20.13■□□□□ 0.81
TRADD-204ENST00000566104 CENPTQ96BT3 561 aa20.13■□□□□ 0.81
TRADD-204ENST00000566104 ZNF599Q96NL3 588 aa20.13■□□□□ 0.81
TRADD-204ENST00000566104 NUP85Q9BW27 656 aa20.13■□□□□ 0.81
TRADD-204ENST00000566104 UCKL1Q9NWZ5 548 aa20.13■□□□□ 0.81
TRADD-204ENST00000566104 ACACAQ13085 2346 aa20.12■□□□□ 0.81
TRADD-204ENST00000566104 A0A087X0T9 212 aa20.12■□□□□ 0.81
TRADD-204ENST00000566104 FAM149AA5PLN7 773 aa20.12■□□□□ 0.81
TRADD-204ENST00000566104 RIOK3O14730 519 aaKnown RBP20.12■□□□□ 0.81
TRADD-204ENST00000566104 SCAMP1O15126 338 aa20.12■□□□□ 0.81
TRADD-204ENST00000566104 CBFA2T2O43439 604 aa20.12■□□□□ 0.81
TRADD-204ENST00000566104 MMP20O60882 483 aa20.12■□□□□ 0.81
TRADD-204ENST00000566104 CYP1A2P05177 515 aa20.12■□□□□ 0.81
TRADD-204ENST00000566104 FAM228BP0C875 321 aa20.12■□□□□ 0.81
TRADD-204ENST00000566104 JUPP14923 745 aa20.12■□□□□ 0.81
TRADD-204ENST00000566104 IL1R2P27930 398 aa20.12■□□□□ 0.81
TRADD-204ENST00000566104 IGFALSP35858 605 aa20.12■□□□□ 0.81
TRADD-204ENST00000566104 NSUN2Q08J23 767 aaKnown RBP eCLIP20.12■□□□□ 0.81
TRADD-204ENST00000566104 TRIM14Q14142 442 aa20.12■□□□□ 0.81
TRADD-204ENST00000566104 TMEM52BQ4KMG9 183 aa20.12■□□□□ 0.81
TRADD-204ENST00000566104 SRLQ86TD4 932 aa20.12■□□□□ 0.81
TRADD-204ENST00000566104 TSEN2Q8NCE0 465 aaKnown RBP20.12■□□□□ 0.81
TRADD-204ENST00000566104 WRAP53Q9BUR4 548 aaKnown RBP20.12■□□□□ 0.81
TRADD-204ENST00000566104 USP29Q9HBJ7 922 aa20.12■□□□□ 0.81
TRADD-204ENST00000566104 SEPT3Q9UH03 358 aa20.12■□□□□ 0.81
TRADD-204ENST00000566104 CSNK1G3Q9Y6M4 447 aa20.12■□□□□ 0.81
TRADD-204ENST00000566104 FREM2Q5SZK8 3169 aa20.11■□□□□ 0.81
TRADD-204ENST00000566104 MYO1FO00160 1098 aa20.11■□□□□ 0.81
TRADD-204ENST00000566104 CASP14P31944 242 aa20.11■□□□□ 0.81
TRADD-204ENST00000566104 HSPA9P38646 679 aaKnown RBP20.11■□□□□ 0.81
TRADD-204ENST00000566104 AP1S1P61966 158 aa20.11■□□□□ 0.81
TRADD-204ENST00000566104 E2F1Q01094 437 aa20.11■□□□□ 0.81
TRADD-204ENST00000566104 BCL2L1Q07817 233 aa20.11■□□□□ 0.81
TRADD-204ENST00000566104 ZNF235Q14590 738 aa20.11■□□□□ 0.81
TRADD-204ENST00000566104 LBRQ14739 615 aaKnown RBP20.11■□□□□ 0.81
TRADD-204ENST00000566104 ZNF542PQ5EBM4 170 aa20.11■□□□□ 0.81
TRADD-204ENST00000566104 CCDC122Q5T0U0 273 aa20.11■□□□□ 0.81
TRADD-204ENST00000566104 HES3Q5TGS1 186 aa20.11■□□□□ 0.81
TRADD-204ENST00000566104 POLNQ7Z5Q5 900 aa20.11■□□□□ 0.81
TRADD-204ENST00000566104 BBS5Q8N3I7 341 aa20.11■□□□□ 0.81
TRADD-204ENST00000566104 ZNF548Q8NEK5 533 aaPredicted RBP20.11■□□□□ 0.81
TRADD-204ENST00000566104 NXPE2Q96DL1 559 aa20.11■□□□□ 0.81
TRADD-204ENST00000566104 CSPG4P5Q96PW8 444 aa20.11■□□□□ 0.81
TRADD-204ENST00000566104 XPO4Q9C0E2 1151 aaKnown RBP20.11■□□□□ 0.81
TRADD-204ENST00000566104 PCDH12Q9NPG4 1184 aa20.11■□□□□ 0.81
TRADD-204ENST00000566104 NCKIPSDQ9NZQ3 722 aa20.11■□□□□ 0.81
TRADD-204ENST00000566104 RCOR3Q9P2K3 495 aaPredicted RBP20.11■□□□□ 0.81
TRADD-204ENST00000566104 ATP8A1Q9Y2Q0 1164 aa20.11■□□□□ 0.81
TRADD-204ENST00000566104 ANKRD11Q6UB99 2663 aaPredicted RBP20.1■□□□□ 0.81
TRADD-204ENST00000566104 LRP4O75096 1905 aa20.1■□□□□ 0.81
TRADD-204ENST00000566104 TRABD2BA6NFA1 517 aa20.1■□□□□ 0.81
TRADD-204ENST00000566104 RARAP10276 462 aa20.1■□□□□ 0.81
TRADD-204ENST00000566104 CKMT1AP12532 417 aa20.1■□□□□ 0.81
TRADD-204ENST00000566104 C6P13671 934 aa20.1■□□□□ 0.81
TRADD-204ENST00000566104 JUNDP17535 347 aa20.1■□□□□ 0.81
TRADD-204ENST00000566104 MMP12P39900 470 aa20.1■□□□□ 0.81
TRADD-204ENST00000566104 RGRP47804 291 aa20.1■□□□□ 0.81
TRADD-204ENST00000566104 DUSP3P51452 185 aaPredicted RBP20.1■□□□□ 0.81
TRADD-204ENST00000566104 POLR2LP62875 67 aaKnown RBP20.1■□□□□ 0.81
TRADD-204ENST00000566104 SLC25A11Q02978 314 aaKnown RBP20.1■□□□□ 0.81
TRADD-204ENST00000566104 CAMK2BQ13554 666 aa20.1■□□□□ 0.81
TRADD-204ENST00000566104 LRRC14Q15048 493 aa20.1■□□□□ 0.81
TRADD-204ENST00000566104 HADHQ16836 314 aaKnown RBP20.1■□□□□ 0.81
TRADD-204ENST00000566104 ZCCHC8Q6NZY4 707 aaKnown RBP20.1■□□□□ 0.81
TRADD-204ENST00000566104 MACC1Q6ZN28 852 aa20.1■□□□□ 0.81
TRADD-204ENST00000566104 ARHGAP36Q6ZRI8 547 aa20.1■□□□□ 0.81
TRADD-204ENST00000566104 CAMK1DQ8IU85 385 aa20.1■□□□□ 0.81
TRADD-204ENST00000566104 FAM181AQ8N9Y4 354 aa20.1■□□□□ 0.81
TRADD-204ENST00000566104 TP53I13Q8NBR0 393 aaPredicted RBP20.1■□□□□ 0.81
TRADD-204ENST00000566104 MDM1Q8TC05 714 aa20.1■□□□□ 0.81
TRADD-204ENST00000566104 NSMCE1Q8WV22 266 aa20.1■□□□□ 0.81
TRADD-204ENST00000566104 RFFLQ8WZ73 363 aa20.1■□□□□ 0.81
TRADD-204ENST00000566104 TBATAQ96M53 351 aa20.1■□□□□ 0.81
TRADD-204ENST00000566104 PSKH2Q96QS6 385 aa20.1■□□□□ 0.81
TRADD-204ENST00000566104 SPASTQ9UBP0 616 aa20.1■□□□□ 0.81
TRADD-204ENST00000566104 APOBEC3BQ9UH17 382 aaKnown RBP20.1■□□□□ 0.81
TRADD-204ENST00000566104 LCMT1Q9UIC8 334 aa20.1■□□□□ 0.81
TRADD-204ENST00000566104 DMXL2Q8TDJ6 3036 aa20.1■□□□□ 0.81
TRADD-204ENST00000566104 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.09■□□□□ 0.81
TRADD-204ENST00000566104 AQP9O43315 295 aa20.09■□□□□ 0.81
TRADD-204ENST00000566104 TPM1P09493 284 aa20.09■□□□□ 0.81
TRADD-204ENST00000566104 GIMD1P0DJR0 217 aa20.09■□□□□ 0.81
TRADD-204ENST00000566104 TCF4P15884 667 aa20.09■□□□□ 0.81
TRADD-204ENST00000566104 HNRNPH3P31942 346 aaKnown RBP20.09■□□□□ 0.81
TRADD-204ENST00000566104 KRT81Q14533 505 aa20.09■□□□□ 0.81
TRADD-204ENST00000566104 AGERQ15109 404 aa20.09■□□□□ 0.81
TRADD-204ENST00000566104 IRF4Q15306 451 aa20.09■□□□□ 0.81
TRADD-204ENST00000566104 CACTIN-AS1Q8N1I8 211 aa20.09■□□□□ 0.81
TRADD-204ENST00000566104 ATPAF2Q8N5M1 289 aa20.09■□□□□ 0.81
TRADD-204ENST00000566104 ZNF564Q8TBZ8 553 aaPredicted RBP20.09■□□□□ 0.81
TRADD-204ENST00000566104 ECHDC3Q96DC8 303 aa20.09■□□□□ 0.81
TRADD-204ENST00000566104 PCDH18Q9HCL0 1135 aa20.09■□□□□ 0.81
TRADD-204ENST00000566104 CFAP47Q6ZTR5 3102 aa20.09■□□□□ 0.81
TRADD-204ENST00000566104 PKD1L2Q7Z442 2459 aa20.09■□□□□ 0.81
TRADD-204ENST00000566104 FAM208BQ5VWN6 2430 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms