RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 SPATA13Q96N96 652 aa12.75□□□□□ -0.37
SF3B3-206ENST00000565990 OSBPL1AQ9BXW6 950 aa12.75□□□□□ -0.37
SF3B3-206ENST00000565990 CEP41Q9BYV8 373 aa12.75□□□□□ -0.37
SF3B3-206ENST00000565990 RAB17Q9H0T7 212 aa12.75□□□□□ -0.37
SF3B3-206ENST00000565990 SUV39H2Q9H5I1 410 aa12.75□□□□□ -0.37
SF3B3-206ENST00000565990 EPB41L5Q9HCM4 733 aa12.75□□□□□ -0.37
SF3B3-206ENST00000565990 SCUBE2Q9NQ36 999 aa12.75□□□□□ -0.37
SF3B3-206ENST00000565990 DKK3Q9UBP4 350 aa12.75□□□□□ -0.37
SF3B3-206ENST00000565990 ZNF318Q5VUA4 2279 aa12.74□□□□□ -0.37
SF3B3-206ENST00000565990 TCRBV21S2A2A0A5A6 115 aa12.74□□□□□ -0.37
SF3B3-206ENST00000565990 GOLGA6L10A6NI86 522 aa12.74□□□□□ -0.37
SF3B3-206ENST00000565990 DLL1O00548 723 aa12.74□□□□□ -0.37
SF3B3-206ENST00000565990 EBAG9O00559 213 aa12.74□□□□□ -0.37
SF3B3-206ENST00000565990 ALDH1A2O94788 518 aa12.74□□□□□ -0.37
SF3B3-206ENST00000565990 STK10O94804 968 aaKnown RBP12.74□□□□□ -0.37
SF3B3-206ENST00000565990 SLC8A1P32418 973 aa12.74□□□□□ -0.37
SF3B3-206ENST00000565990 PTGIRP43119 386 aa12.74□□□□□ -0.37
SF3B3-206ENST00000565990 DRG2P55039 364 aaKnown RBP12.74□□□□□ -0.37
SF3B3-206ENST00000565990 EIF3BP55884 814 aaKnown RBP12.74□□□□□ -0.37
SF3B3-206ENST00000565990 DSC2Q02487 901 aa12.74□□□□□ -0.37
SF3B3-206ENST00000565990 GUCY2DQ02846 1103 aa12.74□□□□□ -0.37
SF3B3-206ENST00000565990 ITKQ08881 620 aa12.74□□□□□ -0.37
SF3B3-206ENST00000565990 CST6Q15828 149 aa12.74□□□□□ -0.37
SF3B3-206ENST00000565990 ZNF528Q3MIS6 628 aa12.74□□□□□ -0.37
SF3B3-206ENST00000565990 ZNF805Q5CZA5 627 aa12.74□□□□□ -0.37
SF3B3-206ENST00000565990 FAM46CQ5VWP2 391 aa12.74□□□□□ -0.37
SF3B3-206ENST00000565990 ZNF776Q68DI1 518 aaPredicted RBP12.74□□□□□ -0.37
SF3B3-206ENST00000565990 GDPD4Q6W3E5 623 aa12.74□□□□□ -0.37
SF3B3-206ENST00000565990 MICALCLQ6ZW33 695 aa12.74□□□□□ -0.37
SF3B3-206ENST00000565990 USP30Q70CQ3 517 aa12.74□□□□□ -0.37
SF3B3-206ENST00000565990 CAMK1DQ8IU85 385 aa12.74□□□□□ -0.37
SF3B3-206ENST00000565990 GLIS1Q8NBF1 620 aa12.74□□□□□ -0.37
SF3B3-206ENST00000565990 MDGA1Q8NFP4 955 aa12.74□□□□□ -0.37
SF3B3-206ENST00000565990 TSTD1Q8NFU3 115 aa12.74□□□□□ -0.37
SF3B3-206ENST00000565990 CCDC110Q8TBZ0 833 aa12.74□□□□□ -0.37
SF3B3-206ENST00000565990 PRCCQ92733 491 aaPredicted RBP12.74□□□□□ -0.37
SF3B3-206ENST00000565990 SIPA1Q96FS4 1042 aa12.74□□□□□ -0.37
SF3B3-206ENST00000565990 ZIM3Q96PE6 472 aa12.74□□□□□ -0.37
SF3B3-206ENST00000565990 KRT12Q99456 494 aa12.74□□□□□ -0.37
SF3B3-206ENST00000565990 GORASP1Q9BQQ3 440 aa12.74□□□□□ -0.37
SF3B3-206ENST00000565990 LRFN3Q9BTN0 628 aa12.74□□□□□ -0.37
SF3B3-206ENST00000565990 HDAC8Q9BY41 377 aa12.74□□□□□ -0.37
SF3B3-206ENST00000565990 PABPC3Q9H361 631 aaKnown RBP12.74□□□□□ -0.37
SF3B3-206ENST00000565990 SEPT10Q9P0V9 454 aa12.74□□□□□ -0.37
SF3B3-206ENST00000565990 USP36Q9P275 1121 aaKnown RBP12.74□□□□□ -0.37
SF3B3-206ENST00000565990 KLHL8Q9P2G9 620 aaPredicted RBP12.74□□□□□ -0.37
SF3B3-206ENST00000565990 CEP192Q8TEP8 1941 aa12.73□□□□□ -0.37
SF3B3-206ENST00000565990 A0A087WUV0 522 aaPredicted RBP12.73□□□□□ -0.37
SF3B3-206ENST00000565990 LOC285095A0A1B0GVY8 99 aa12.73□□□□□ -0.37
SF3B3-206ENST00000565990 A0A1W2PQ67 120 aa12.73□□□□□ -0.37
SF3B3-206ENST00000565990 TSPAN11A1L157 253 aa12.73□□□□□ -0.37
SF3B3-206ENST00000565990 C10orf142B7Z368 130 aa12.73□□□□□ -0.37
SF3B3-206ENST00000565990 C1QTNF3-AMACRE9PGA6 284 aa12.73□□□□□ -0.37
SF3B3-206ENST00000565990 RAD51CO43502 376 aa12.73□□□□□ -0.37
SF3B3-206ENST00000565990 LAMTOR5O43504 91 aa12.73□□□□□ -0.37
SF3B3-206ENST00000565990 BNIP3LO60238 219 aa12.73□□□□□ -0.37
SF3B3-206ENST00000565990 METTL18O95568 372 aa12.73□□□□□ -0.37
SF3B3-206ENST00000565990 ADH1BP00325 375 aa12.73□□□□□ -0.37
SF3B3-206ENST00000565990 PRLP01236 227 aa12.73□□□□□ -0.37
SF3B3-206ENST00000565990 IL1BP01584 269 aa12.73□□□□□ -0.37
SF3B3-206ENST00000565990 EPOP01588 193 aa12.73□□□□□ -0.37
SF3B3-206ENST00000565990 SERPINF2P08697 491 aa12.73□□□□□ -0.37
SF3B3-206ENST00000565990 ETS1P14921 441 aa12.73□□□□□ -0.37
SF3B3-206ENST00000565990 NFKB1P19838 968 aa12.73□□□□□ -0.37
SF3B3-206ENST00000565990 ITGB7P26010 798 aa12.73□□□□□ -0.37
SF3B3-206ENST00000565990 RPL22P35268 128 aaKnown RBP12.73□□□□□ -0.37
SF3B3-206ENST00000565990 DRD3P35462 400 aa12.73□□□□□ -0.37
SF3B3-206ENST00000565990 CARSP49589 748 aaKnown RBP12.73□□□□□ -0.37
SF3B3-206ENST00000565990 DHX34Q14147 1143 aaKnown RBP12.73□□□□□ -0.37
SF3B3-206ENST00000565990 ITPRIPL1Q6GPH6 555 aa12.73□□□□□ -0.37
SF3B3-206ENST00000565990 RYBPQ8N488 228 aaPredicted RBP12.73□□□□□ -0.37
SF3B3-206ENST00000565990 AADATQ8N5Z0 425 aa12.73□□□□□ -0.37
SF3B3-206ENST00000565990 OR6K2Q8NGY2 324 aa12.73□□□□□ -0.37
SF3B3-206ENST00000565990 SPATA22Q8NHS9 363 aa12.73□□□□□ -0.37
SF3B3-206ENST00000565990 ARRDC3Q96B67 414 aa12.73□□□□□ -0.37
SF3B3-206ENST00000565990 ATP6V1G3Q96LB4 118 aa12.73□□□□□ -0.37
SF3B3-206ENST00000565990 HHIPQ96QV1 700 aa12.73□□□□□ -0.37
SF3B3-206ENST00000565990 FAM126AQ9BYI3 521 aaPredicted RBP12.73□□□□□ -0.37
SF3B3-206ENST00000565990 DDX47Q9H0S4 455 aaKnown RBP12.73□□□□□ -0.37
SF3B3-206ENST00000565990 SLC6A17Q9H1V8 727 aa12.73□□□□□ -0.37
SF3B3-206ENST00000565990 GBA3Q9H227 469 aa12.73□□□□□ -0.37
SF3B3-206ENST00000565990 ZDHHC6Q9H6R6 413 aa12.73□□□□□ -0.37
SF3B3-206ENST00000565990 ATP13A3Q9H7F0 1226 aa12.73□□□□□ -0.37
SF3B3-206ENST00000565990 VPS45Q9NRW7 570 aa12.73□□□□□ -0.37
SF3B3-206ENST00000565990 AAR2Q9Y312 384 aaKnown RBP12.73□□□□□ -0.37
SF3B3-206ENST00000565990 PPIL1Q9Y3C6 166 aa12.73□□□□□ -0.37
SF3B3-206ENST00000565990 ARIH1Q9Y4X5 557 aaPredicted RBP12.73□□□□□ -0.37
SF3B3-206ENST00000565990 PCDHGC4Q9Y5F7 938 aa12.73□□□□□ -0.37
SF3B3-206ENST00000565990 GALR2O43603 387 aaPredicted RBP12.72□□□□□ -0.37
SF3B3-206ENST00000565990 SOCS5O75159 536 aa12.72□□□□□ -0.37
SF3B3-206ENST00000565990 NEBLO76041 1014 aa12.72□□□□□ -0.37
SF3B3-206ENST00000565990 ZSCAN5DPP0CG00 497 aa12.72□□□□□ -0.37
SF3B3-206ENST00000565990 SERPINA4P29622 427 aa12.72□□□□□ -0.37
SF3B3-206ENST00000565990 CD86P42081 329 aa12.72□□□□□ -0.37
SF3B3-206ENST00000565990 TPMTP51580 245 aa12.72□□□□□ -0.37
SF3B3-206ENST00000565990 SUOXP51687 545 aa12.72□□□□□ -0.37
SF3B3-206ENST00000565990 METAP1P53582 386 aa12.72□□□□□ -0.37
SF3B3-206ENST00000565990 POLR2LP62875 67 aaKnown RBP12.72□□□□□ -0.37
SF3B3-206ENST00000565990 SLC7A5Q01650 507 aa12.72□□□□□ -0.37
SF3B3-206ENST00000565990 BCL2L1Q07817 233 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms