RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 GATAD2AQ86YP4 633 aa16.9■□□□□ 0.3
USB1-211ENST00000565662 ARHGAP12Q8IWW6 846 aa16.9■□□□□ 0.3
USB1-211ENST00000565662 RHOT2Q8IXI1 618 aa16.9■□□□□ 0.3
USB1-211ENST00000565662 NDUFAF2Q8N183 169 aa16.9■□□□□ 0.3
USB1-211ENST00000565662 EID2Q8N6I1 236 aa16.9■□□□□ 0.3
USB1-211ENST00000565662 HSPH1Q92598 858 aa16.9■□□□□ 0.3
USB1-211ENST00000565662 GLMNQ92990 594 aa16.9■□□□□ 0.3
USB1-211ENST00000565662 CELF6Q96J87 481 aaKnown RBP16.9■□□□□ 0.3
USB1-211ENST00000565662 CSPG4P5Q96PW8 444 aa16.9■□□□□ 0.3
USB1-211ENST00000565662 MAGEB5Q9BZ81 275 aa16.9■□□□□ 0.3
USB1-211ENST00000565662 CTTNBP2NLQ9P2B4 639 aa16.9■□□□□ 0.3
USB1-211ENST00000565662 ATP8A1Q9Y2Q0 1164 aa16.9■□□□□ 0.3
USB1-211ENST00000565662 MAP1BP46821 2468 aaKnown RBP16.9■□□□□ 0.3
USB1-211ENST00000565662 CACNA1BQ00975 2339 aa16.9■□□□□ 0.3
USB1-211ENST00000565662 IGLON5A6NGN9 336 aa16.89■□□□□ 0.29
USB1-211ENST00000565662 ZNF487B1APH4 448 aa16.89■□□□□ 0.29
USB1-211ENST00000565662 C1QTNF9BB2RNN3 333 aa16.89■□□□□ 0.29
USB1-211ENST00000565662 AKR1B10O60218 316 aa16.89■□□□□ 0.29
USB1-211ENST00000565662 GP1BAP07359 652 aa16.89■□□□□ 0.29
USB1-211ENST00000565662 TMEM253P0C7T8 217 aa16.89■□□□□ 0.29
USB1-211ENST00000565662 C1QTNF9P0C862 333 aa16.89■□□□□ 0.29
USB1-211ENST00000565662 RARAP10276 462 aa16.89■□□□□ 0.29
USB1-211ENST00000565662 CA4P22748 312 aa16.89■□□□□ 0.29
USB1-211ENST00000565662 DGKAP23743 735 aa16.89■□□□□ 0.29
USB1-211ENST00000565662 ACADVLP49748 655 aa16.89■□□□□ 0.29
USB1-211ENST00000565662 PFN3P60673 137 aa16.89■□□□□ 0.29
USB1-211ENST00000565662 DAB2P98082 770 aa16.89■□□□□ 0.29
USB1-211ENST00000565662 SLC25A11Q02978 314 aaKnown RBP16.89■□□□□ 0.29
USB1-211ENST00000565662 MACC1Q6ZN28 852 aa16.89■□□□□ 0.29
USB1-211ENST00000565662 PDCD7Q8N8D1 485 aaKnown RBP16.89■□□□□ 0.29
USB1-211ENST00000565662 FAM181AQ8N9Y4 354 aa16.89■□□□□ 0.29
USB1-211ENST00000565662 FAM71BQ8TC56 605 aa16.89■□□□□ 0.29
USB1-211ENST00000565662 TSC1Q92574 1164 aa16.89■□□□□ 0.29
USB1-211ENST00000565662 KLK6Q92876 244 aa16.89■□□□□ 0.29
USB1-211ENST00000565662 FATE1Q969F0 183 aa16.89■□□□□ 0.29
USB1-211ENST00000565662 MYOCQ99972 504 aa16.89■□□□□ 0.29
USB1-211ENST00000565662 TRIM7Q9C029 511 aa16.89■□□□□ 0.29
USB1-211ENST00000565662 KLC2Q9H0B6 622 aa16.89■□□□□ 0.29
USB1-211ENST00000565662 FZD3Q9NPG1 666 aa16.89■□□□□ 0.29
USB1-211ENST00000565662 LUC7LQ9NQ29 371 aaKnown RBP16.89■□□□□ 0.29
USB1-211ENST00000565662 DNAJC28Q9NX36 388 aa16.89■□□□□ 0.29
USB1-211ENST00000565662 SPASTQ9UBP0 616 aa16.89■□□□□ 0.29
USB1-211ENST00000565662 DNPEPQ9ULA0 475 aa16.89■□□□□ 0.29
USB1-211ENST00000565662 ACTL7AQ9Y615 435 aa16.89■□□□□ 0.29
USB1-211ENST00000565662 PTPRBP23467 1997 aa16.89■□□□□ 0.29
USB1-211ENST00000565662 ANKRD36A6QL64 1941 aa16.88■□□□□ 0.29
USB1-211ENST00000565662 J3KR12 359 aa16.88■□□□□ 0.29
USB1-211ENST00000565662 TPP1O14773 563 aa16.88■□□□□ 0.29
USB1-211ENST00000565662 SCAMP1O15126 338 aa16.88■□□□□ 0.29
USB1-211ENST00000565662 MX2P20592 715 aa16.88■□□□□ 0.29
USB1-211ENST00000565662 KELP23276 732 aa16.88■□□□□ 0.29
USB1-211ENST00000565662 GKP32189 559 aa16.88■□□□□ 0.29
USB1-211ENST00000565662 MMP12P39900 470 aa16.88■□□□□ 0.29
USB1-211ENST00000565662 ARHGAP25P42331 645 aa16.88■□□□□ 0.29
USB1-211ENST00000565662 SSR1P43307 286 aaKnown RBP16.88■□□□□ 0.29
USB1-211ENST00000565662 PDE1CQ14123 709 aaPredicted RBP16.88■□□□□ 0.29
USB1-211ENST00000565662 LRRC14Q15048 493 aa16.88■□□□□ 0.29
USB1-211ENST00000565662 SMTNL2Q2TAL5 461 aa16.88■□□□□ 0.29
USB1-211ENST00000565662 ZCCHC8Q6NZY4 707 aaKnown RBP16.88■□□□□ 0.29
USB1-211ENST00000565662 LEKR1Q6ZMV7 388 aa16.88■□□□□ 0.29
USB1-211ENST00000565662 VSTM4Q8IW00 320 aa16.88■□□□□ 0.29
USB1-211ENST00000565662 WDR48Q8TAF3 677 aa16.88■□□□□ 0.29
USB1-211ENST00000565662 ECHDC3Q96DC8 303 aa16.88■□□□□ 0.29
USB1-211ENST00000565662 EXOC2Q96KP1 924 aa16.88■□□□□ 0.29
USB1-211ENST00000565662 BMFQ96LC9 184 aa16.88■□□□□ 0.29
USB1-211ENST00000565662 CCDC42Q96M95 316 aa16.88■□□□□ 0.29
USB1-211ENST00000565662 ZNF830Q96NB3 372 aaPredicted RBP16.88■□□□□ 0.29
USB1-211ENST00000565662 KLF6Q99612 283 aaPredicted RBP16.88■□□□□ 0.29
USB1-211ENST00000565662 SLC13A1Q9BZW2 595 aa16.88■□□□□ 0.29
USB1-211ENST00000565662 CCDC86Q9H6F5 360 aaKnown RBP16.88■□□□□ 0.29
USB1-211ENST00000565662 PCDH18Q9HCL0 1135 aa16.88■□□□□ 0.29
USB1-211ENST00000565662 ABHD10Q9NUJ1 306 aa16.88■□□□□ 0.29
USB1-211ENST00000565662 INTUQ9ULD6 942 aa16.88■□□□□ 0.29
USB1-211ENST00000565662 DOCK9Q9BZ29 2069 aa16.88■□□□□ 0.29
USB1-211ENST00000565662 PROSCO94903 275 aa16.87■□□□□ 0.29
USB1-211ENST00000565662 TIMP2P16035 220 aa16.87■□□□□ 0.29
USB1-211ENST00000565662 SPINK2P20155 84 aa16.87■□□□□ 0.29
USB1-211ENST00000565662 IL1R2P27930 398 aa16.87■□□□□ 0.29
USB1-211ENST00000565662 EIF4A3P38919 411 aaKnown RBP16.87■□□□□ 0.29
USB1-211ENST00000565662 RPIAP49247 311 aa16.87■□□□□ 0.29
USB1-211ENST00000565662 BNIP3Q12983 259 aa16.87■□□□□ 0.29
USB1-211ENST00000565662 MTM1Q13496 603 aa16.87■□□□□ 0.29
USB1-211ENST00000565662 PROX2Q3B8N5 592 aa16.87■□□□□ 0.29
USB1-211ENST00000565662 MARC1Q5VT66 337 aa16.87■□□□□ 0.29
USB1-211ENST00000565662 SLC22A18ASQ8N1D0 253 aa16.87■□□□□ 0.29
USB1-211ENST00000565662 FSTL5Q8N475 847 aaPredicted RBP16.87■□□□□ 0.29
USB1-211ENST00000565662 NPWQ8N729 165 aa16.87■□□□□ 0.29
USB1-211ENST00000565662 PNPLA1Q8N8W4 532 aa16.87■□□□□ 0.29
USB1-211ENST00000565662 TSEN2Q8NCE0 465 aaKnown RBP16.87■□□□□ 0.29
USB1-211ENST00000565662 TPCN2Q8NHX9 752 aa16.87■□□□□ 0.29
USB1-211ENST00000565662 SCG3Q8WXD2 468 aaKnown RBP16.87■□□□□ 0.29
USB1-211ENST00000565662 RFFLQ8WZ73 363 aa16.87■□□□□ 0.29
USB1-211ENST00000565662 CENPTQ96BT3 561 aa16.87■□□□□ 0.29
USB1-211ENST00000565662 NXPE2Q96DL1 559 aa16.87■□□□□ 0.29
USB1-211ENST00000565662 NUDCD1Q96RS6 583 aa16.87■□□□□ 0.29
USB1-211ENST00000565662 MGME1Q9BQP7 344 aa16.87■□□□□ 0.29
USB1-211ENST00000565662 NENFQ9UMX5 172 aa16.87■□□□□ 0.29
USB1-211ENST00000565662 POM121BA6NF01 834 aa16.86■□□□□ 0.29
USB1-211ENST00000565662 GOLGA8CPA6NN73 597 aa16.86■□□□□ 0.29
USB1-211ENST00000565662 PDE2AO00408 941 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms