RNA–Protein interactions for RNA: ENST00000565507.5

SCAPER-215, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 5

Gene SCAPER, Length 2,627 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-215	ENST00000565507	SLC4A7	Q9Y6M7	1214 aa		13.27	□□□□□ -0.28
SCAPER-215	ENST00000565507		A0A087X1B8	175 aa		13.27	□□□□□ -0.29
SCAPER-215	ENST00000565507	TRPC5OS	A6NMA1	111 aa		13.27	□□□□□ -0.29
SCAPER-215	ENST00000565507	MGEA5	O60502	916 aa		13.27	□□□□□ -0.29
SCAPER-215	ENST00000565507	PMPCB	O75439	489 aa		13.27	□□□□□ -0.29
SCAPER-215	ENST00000565507	CRTAM	O95727	393 aa		13.27	□□□□□ -0.29
SCAPER-215	ENST00000565507	POU4F1	Q01851	419 aa		13.27	□□□□□ -0.29
SCAPER-215	ENST00000565507	PAN2	Q504Q3	1202 aa	Known RBP	13.27	□□□□□ -0.29
SCAPER-215	ENST00000565507	ZNF789	Q5FWF6	425 aa		13.27	□□□□□ -0.29
SCAPER-215	ENST00000565507	MFSD14C	Q5VZR4	134 aa		13.27	□□□□□ -0.29
SCAPER-215	ENST00000565507	AFMID	Q63HM1	303 aa		13.27	□□□□□ -0.29
SCAPER-215	ENST00000565507	LRRTM3	Q86VH5	581 aa		13.27	□□□□□ -0.29
SCAPER-215	ENST00000565507	LZTR1	Q8N653	840 aa		13.27	□□□□□ -0.29
SCAPER-215	ENST00000565507	ADCY4	Q8NFM4	1077 aa		13.27	□□□□□ -0.29
SCAPER-215	ENST00000565507	SPPL2B	Q8TCT7	592 aa		13.27	□□□□□ -0.29
SCAPER-215	ENST00000565507	OLFM1	Q99784	485 aa		13.27	□□□□□ -0.29
SCAPER-215	ENST00000565507	ACBD6	Q9BR61	282 aa		13.27	□□□□□ -0.29
SCAPER-215	ENST00000565507	MTG1	Q9BT17	334 aa	Predicted RBP	13.27	□□□□□ -0.29
SCAPER-215	ENST00000565507	EPB41L1	Q9H4G0	881 aa		13.27	□□□□□ -0.29
SCAPER-215	ENST00000565507	PCDHGA7	Q9Y5G6	932 aa		13.27	□□□□□ -0.29
SCAPER-215	ENST00000565507		F8W810	466 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	SEPT4	O43236	478 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	ARSA	P15289	507 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	PML	P29590	882 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	THPO	P40225	353 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	PSMD8	P48556	350 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	MRPS6	P82932	125 aa	Known RBP	13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	RBBP5	Q15291	538 aa	Known RBP	13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	TECRL	Q5HYJ1	363 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	NEPRO	Q6NW34	567 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	GK5	Q6ZS86	529 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	KDELC2	Q7Z4H8	507 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	TMEM102	Q8N9M5	508 aa	Predicted RBP	13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	FAM156A	Q8NDB6	213 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	NAT14	Q8WUY8	206 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	CAPNS2	Q96L46	248 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	CHST12	Q9NRB3	414 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	RBM22	Q9NW64	420 aa	Known RBP eCLIP	13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	UTP6	Q9NYH9	597 aa	Known RBP	13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	BCAP29	Q9UHQ4	241 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	FGF10	O15520	208 aa	Predicted RBP	13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	TFAP2A	P05549	437 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	CPB1	P15086	417 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	CD52	P31358	61 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	RPL9	P32969	192 aa	Known RBP	13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	ATXN3	P54252	364 aa	Predicted RBP	13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	C1QTNF8	P60827	252 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	PFKP	Q01813	784 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	NOMO2	Q5JPE7	1267 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	BRMS1L	Q5PSV4	323 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	BTBD8	Q5XKL5	378 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	CD300LG	Q6UXG3	332 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	TMA16	Q96EY4	203 aa	Known RBP	13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	FCRL2	Q96LA5	508 aa	Predicted RBP	13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	TMEM209	Q96SK2	561 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	KATNAL1	Q9BW62	490 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507		Q9Y3F1	56 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	AP4B1	Q9Y6B7	739 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	COMMD3-BMI1	R4GMX3	469 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	KCNU1	A8MYU2	1149 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	MSI1	O43347	362 aa	Known RBP	13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	RNASEH2A	O75792	299 aa	Known RBP	13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	OR6B1	O95007	311 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	PGM3	O95394	542 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	ETS2	P15036	469 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	PAM	P19021	973 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	CSHL1	Q14406	222 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	GK3P	Q14409	553 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	TAF2	Q6P1X5	1199 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	RPS27L	Q71UM5	84 aa	Known RBP	13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	OR10T2	Q8NGX3	314 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	CASP10	Q92851	521 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	PRICKLE1	Q96MT3	831 aa	Predicted RBP	13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	NDN	Q99608	321 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	FSD1L	Q9BXM9	530 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	MEAF6	Q9HAF1	191 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	SFMBT1	Q9UHJ3	866 aa		13.26	□□□□□ -0.29
SCAPER-215	ENST00000565507	SMIM31	A0A1B0GVY4	71 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507		A8MT66	165 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	CLGN	O14967	610 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	PEX11B	O96011	259 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	CYP11A1	P05108	521 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	ODC1	P11926	461 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	TCN1	P20061	433 aa	Predicted RBP	13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	HTR7	P34969	479 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	CDKL1	Q00532	357 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	PTK2B	Q14289	1009 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	KDELC1	Q6UW63	502 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	KIAA0408	Q6ZU52	694 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	PNPLA1	Q8N8W4	532 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	CATSPER1	Q8NEC5	780 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	ASB9	Q96DX5	294 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	UBXN10	Q96LJ8	280 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	PRKD2	Q9BZL6	878 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	SENP6	Q9GZR1	1112 aa	Predicted RBP	13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	CATSPERB	Q9H7T0	1116 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	ARNT2	Q9HBZ2	717 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	GTSE1	Q9NYZ3	720 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	GIT1	Q9Y2X7	761 aa		13.25	□□□□□ -0.29
SCAPER-215	ENST00000565507	NYNRIN	Q9P2P1	1898 aa	Known RBP	13.25	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms