RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 CREB3O43889 395 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 PIGNO95427 931 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 CALB1P05937 261 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 PEX5P50542 639 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 THOP1P52888 689 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 PDX1P52945 283 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 AIF1P55008 147 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 CXADRP78310 365 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 C19orf57Q0VDD7 668 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 IRF4Q15306 451 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 UGP2Q16851 508 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 WSCD2Q2TBF2 565 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 PARP15Q460N3 678 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 C6orf132Q5T0Z8 1188 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 FKBP15Q5T1M5 1219 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 FAXCQ5TGI0 409 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 SCYL2Q6P3W7 929 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 CRTC1Q6UUV9 634 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 IRF2BP2Q7Z5L9 587 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 ZSWIM9Q86XI8 627 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 ZNF843Q8N446 348 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 ARFGAP1Q8N6T3 406 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 TPCN2Q8NHX9 752 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 HCAR2Q8TDS4 363 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 CXorf40AQ8TE69 158 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 SNRNP27Q8WVK2 155 aaKnown RBP8.67□□□□□ -1.02
CAPN3-213ENST00000565173 EXOC2Q96KP1 924 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 MCEEQ96PE7 176 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 ERGIC2Q96RQ1 377 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 LGMNQ99538 433 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 AGPAT1Q99943 283 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 CNPY3Q9BT09 278 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 SYT11Q9BT88 431 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 SLC13A1Q9BZW2 595 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 SUV39H2Q9H5I1 410 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 LRRC19Q9H756 370 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 PDFQ9HBH1 243 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 CPNE5Q9HCH3 593 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 EVA1BQ9NVM1 165 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 LIMA1Q9UHB6 759 aaKnown RBP8.67□□□□□ -1.02
CAPN3-213ENST00000565173 COQ6Q9Y2Z9 468 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 PCDHGA8Q9Y5G5 932 aa8.67□□□□□ -1.02
CAPN3-213ENST00000565173 ZNF462Q96JM2 2506 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 NTN3O00634 580 aaPredicted RBP8.66□□□□□ -1.02
CAPN3-213ENST00000565173 PRAMEF11O60813 436 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 TCEA3O75764 348 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 IGSF6O95976 241 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 RGRP47804 291 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 SUOXP51687 545 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 HK3P52790 923 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 RHOAP61586 193 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 PPARDQ03181 441 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 UBXN1Q04323 297 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 RAD51Q06609 339 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 INPP5AQ14642 412 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 NCAPHQ15003 741 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 LRRC14Q15048 493 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 AGERQ15109 404 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 CA9Q16790 459 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 ALG11Q2TAA5 492 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 C3orf38Q5JPI3 329 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 EFHC2Q5JST6 749 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 AFMIDQ63HM1 303 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 KCTD16Q68DU8 428 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 ACAD10Q6JQN1 1059 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 DNAJC24Q6P3W2 148 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 LVRNQ6Q4G3 990 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 RBM44Q6ZP01 1051 aaKnown RBP8.66□□□□□ -1.02
CAPN3-213ENST00000565173 ZNF354CQ86Y25 554 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 CAMK1DQ8IU85 385 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 MCOLN2Q8IZK6 566 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 NEK11Q8NG66 645 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 TSACCQ96A04 125 aaPredicted RBP8.66□□□□□ -1.02
CAPN3-213ENST00000565173 FUBP1Q96AE4 644 aaKnown RBP8.66□□□□□ -1.02
CAPN3-213ENST00000565173 VCPIP1Q96JH7 1222 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 NSMCE3Q96MG7 304 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 CCDC3Q9BQI4 270 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 APOOQ9BUR5 198 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 C1QTNF7Q9BXJ2 289 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 DPH1Q9BZG8 443 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 SLC39A8Q9C0K1 460 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 CATSPERBQ9H7T0 1116 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 PCDH12Q9NPG4 1184 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 THSD1Q9NS62 852 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 TAS2R14Q9NYV8 317 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 RABGEF1Q9UJ41 708 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 PADI4Q9UM07 663 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 RP1P56715 2156 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 LRRK1Q38SD2 2015 aa8.66□□□□□ -1.02
CAPN3-213ENST00000565173 TMEM110-MUSTN1A8MSY1 372 aa8.65□□□□□ -1.02
CAPN3-213ENST00000565173 ERVH48-1M5A8F1 160 aa8.65□□□□□ -1.02
CAPN3-213ENST00000565173 FGF10O15520 208 aaPredicted RBP8.65□□□□□ -1.02
CAPN3-213ENST00000565173 KLK10O43240 276 aa8.65□□□□□ -1.02
CAPN3-213ENST00000565173 TPM2P07951 284 aa8.65□□□□□ -1.02
CAPN3-213ENST00000565173 ANXA6P08133 673 aa8.65□□□□□ -1.02
CAPN3-213ENST00000565173 C6P13671 934 aa8.65□□□□□ -1.02
CAPN3-213ENST00000565173 MMP12P39900 470 aa8.65□□□□□ -1.02
CAPN3-213ENST00000565173 CSNK1DP48730 415 aa8.65□□□□□ -1.02
CAPN3-213ENST00000565173 RPIAP49247 311 aa8.65□□□□□ -1.02
CAPN3-213ENST00000565173 LIG3P49916 1009 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms