RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 ZNF449Q6P9G9 518 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 C3orf62Q6ZUJ4 267 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 HTR3DQ70Z44 454 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 CEP68Q76N32 757 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 SYT13Q7L8C5 426 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 CAND1Q86VP6 1230 aaKnown RBP9.87□□□□□ -0.83
UBFD1-203ENST00000564106 FAM217AQ8IXS0 508 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 KLHDC8BQ8IXV7 354 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 KIAA1958Q8N8K9 716 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 IL17RCQ8NAC3 791 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 RLN3Q8WXF3 142 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 HMCESQ96FZ2 354 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 ACOX2Q99424 681 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 ACSS3Q9H6R3 686 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 CNOT10Q9H9A5 744 aaKnown RBP9.87□□□□□ -0.83
UBFD1-203ENST00000564106 NDFIP2Q9NV92 336 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 BFARQ9NZS9 450 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 ZC3H7BQ9UGR2 993 aaKnown RBP9.87□□□□□ -0.83
UBFD1-203ENST00000564106 LGALS13Q9UHV8 139 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 SLC8A2Q9UPR5 921 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 CHMP2BQ9UQN3 213 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 TBC1D30Q9Y2I9 924 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 IKBKGQ9Y6K9 419 aa9.87□□□□□ -0.83
UBFD1-203ENST00000564106 ADAMTS9Q9P2N4 1935 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 CXorf51AA0A1B0GTR3 108 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 E2F8A0AVK6 867 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 TLDC2A0PJX2 215 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 PRAMEF11O60813 436 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 KLF8O95600 359 aaPredicted RBP9.86□□□□□ -0.83
UBFD1-203ENST00000564106 NFATC1O95644 943 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 KLKB1P03952 638 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 CYBBP04839 570 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 POLBP06746 335 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 ADH5P11766 374 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 NR1D1P20393 614 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 CES1P23141 567 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 SLC6A4P31645 630 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 TIE1P35590 1138 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 NPY2RP49146 381 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 GEMIN4P57678 1058 aaKnown RBP9.86□□□□□ -0.83
UBFD1-203ENST00000564106 NAB1Q13506 487 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 ZNF235Q14590 738 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 FASTKD3Q14CZ7 662 aaKnown RBP9.86□□□□□ -0.83
UBFD1-203ENST00000564106 SLC14A2Q15849 920 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 MPPE1Q53F39 396 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 KCTD11Q693B1 232 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 ANO7Q6IWH7 933 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 RFWD3Q6PCD5 774 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 Q6ZNB5 142 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 CYS1Q717R9 158 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 METTL3Q86U44 580 aaKnown RBP9.86□□□□□ -0.83
UBFD1-203ENST00000564106 RASSF3Q86WH2 238 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 ANKMY2Q8IV38 441 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 TP53INP2Q8IXH6 220 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 TEX26Q8N6G2 289 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 DNAAF3Q8N9W5 541 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 TXNDC5Q8NBS9 432 aaKnown RBP9.86□□□□□ -0.83
UBFD1-203ENST00000564106 GSDMBQ8TAX9 411 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 EPS8L3Q8TE67 593 aaKnown RBP9.86□□□□□ -0.83
UBFD1-203ENST00000564106 CDKL2Q92772 493 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 ARL8AQ96BM9 186 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 STAMBPL1Q96FJ0 436 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 PRICKLE1Q96MT3 831 aaPredicted RBP9.86□□□□□ -0.83
UBFD1-203ENST00000564106 PWWP2AQ96N64 755 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 EBNA1BP2Q99848 306 aaKnown RBP9.86□□□□□ -0.83
UBFD1-203ENST00000564106 FSD1LQ9BXM9 530 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 CEP41Q9BYV8 373 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 POLR1EQ9GZS1 481 aaKnown RBP9.86□□□□□ -0.83
UBFD1-203ENST00000564106 IL22Q9GZX6 179 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 SLC25A51Q9H1U9 297 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 SLC6A17Q9H1V8 727 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 NOL6Q9H6R4 1146 aaKnown RBP9.86□□□□□ -0.83
UBFD1-203ENST00000564106 GLOD4Q9HC38 313 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 CD248Q9HCU0 757 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 RBM22Q9NW64 420 aaKnown RBP eCLIP9.86□□□□□ -0.83
UBFD1-203ENST00000564106 BCCIPQ9P287 314 aaKnown RBP eCLIP9.86□□□□□ -0.83
UBFD1-203ENST00000564106 PSMC3IPQ9P2W1 217 aaPredicted RBP9.86□□□□□ -0.83
UBFD1-203ENST00000564106 MBD1Q9UIS9 605 aaPredicted RBP9.86□□□□□ -0.83
UBFD1-203ENST00000564106 CLEC4EQ9ULY5 219 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 MMP17Q9ULZ9 603 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 ACTL7BQ9Y614 415 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 MAD1L1Q9Y6D9 718 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 AKAP13Q12802 2813 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 CEP192Q8TEP8 1941 aa9.86□□□□□ -0.83
UBFD1-203ENST00000564106 GOLGA6L7A0A1B0GV03 622 aa9.85□□□□□ -0.83
UBFD1-203ENST00000564106 H0Y626 953 aa9.85□□□□□ -0.83
UBFD1-203ENST00000564106 SLC30A4O14863 429 aa9.85□□□□□ -0.83
UBFD1-203ENST00000564106 TM4SF5O14894 197 aa9.85□□□□□ -0.83
UBFD1-203ENST00000564106 TULP3O75386 442 aa9.85□□□□□ -0.83
UBFD1-203ENST00000564106 KAT7O95251 611 aa9.85□□□□□ -0.83
UBFD1-203ENST00000564106 APBB3O95704 486 aa9.85□□□□□ -0.83
UBFD1-203ENST00000564106 PGAM1P18669 254 aa9.85□□□□□ -0.83
UBFD1-203ENST00000564106 CD68P34810 354 aaPredicted RBP9.85□□□□□ -0.83
UBFD1-203ENST00000564106 CNR2P34972 360 aa9.85□□□□□ -0.83
UBFD1-203ENST00000564106 WASP42768 502 aa9.85□□□□□ -0.83
UBFD1-203ENST00000564106 IRAK1P51617 712 aa9.85□□□□□ -0.83
UBFD1-203ENST00000564106 GAD2Q05329 585 aa9.85□□□□□ -0.83
UBFD1-203ENST00000564106 SLC12A1Q13621 1099 aa9.85□□□□□ -0.83
UBFD1-203ENST00000564106 CDH18Q13634 790 aa9.85□□□□□ -0.83
UBFD1-203ENST00000564106 LBRQ14739 615 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms