RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 INO80CQ6PI98 192 aaPredicted RBP21.12■□□□□ 0.97
HERC2-204ENST00000563945 ENPP7Q6UWV6 458 aa21.12■□□□□ 0.97
HERC2-204ENST00000563945 SDR16C5Q8N3Y7 309 aa21.12■□□□□ 0.97
HERC2-204ENST00000563945 FBXO39Q8N4B4 442 aa21.12■□□□□ 0.97
HERC2-204ENST00000563945 CCDC185Q8N715 623 aa21.12■□□□□ 0.97
HERC2-204ENST00000563945 ARL10Q8N8L6 244 aa21.12■□□□□ 0.97
HERC2-204ENST00000563945 SNRNP27Q8WVK2 155 aaKnown RBP21.12■□□□□ 0.97
HERC2-204ENST00000563945 NTAN1Q96AB6 310 aa21.12■□□□□ 0.97
HERC2-204ENST00000563945 MAGEB5Q9BZ81 275 aa21.12■□□□□ 0.97
HERC2-204ENST00000563945 CLPBQ9H078 707 aa21.12■□□□□ 0.97
HERC2-204ENST00000563945 CLSTN2Q9H4D0 955 aa21.12■□□□□ 0.97
HERC2-204ENST00000563945 CATSPERBQ9H7T0 1116 aa21.12■□□□□ 0.97
HERC2-204ENST00000563945 EPB41L5Q9HCM4 733 aa21.12■□□□□ 0.97
HERC2-204ENST00000563945 TAB2Q9NYJ8 693 aa21.12■□□□□ 0.97
HERC2-204ENST00000563945 ADAM22Q9P0K1 906 aa21.12■□□□□ 0.97
HERC2-204ENST00000563945 NOCTQ9UK39 431 aaKnown RBP21.12■□□□□ 0.97
HERC2-204ENST00000563945 MFHAS1Q9Y4C4 1052 aa21.12■□□□□ 0.97
HERC2-204ENST00000563945 MGAQ8IWI9 3026 aa21.11■□□□□ 0.97
HERC2-204ENST00000563945 CFAP46Q8IYW2 2715 aa21.11■□□□□ 0.97
HERC2-204ENST00000563945 A0A1W2PNU3 283 aaPredicted RBP21.11■□□□□ 0.97
HERC2-204ENST00000563945 CDRT15L2A8MXV6 281 aa21.11■□□□□ 0.97
HERC2-204ENST00000563945 DESP17661 470 aa21.11■□□□□ 0.97
HERC2-204ENST00000563945 ITIH2P19823 946 aa21.11■□□□□ 0.97
HERC2-204ENST00000563945 HK3P52790 923 aa21.11■□□□□ 0.97
HERC2-204ENST00000563945 HDAC4P56524 1084 aa21.11■□□□□ 0.97
HERC2-204ENST00000563945 FMO1Q01740 532 aa21.11■□□□□ 0.97
HERC2-204ENST00000563945 GRM3Q14832 879 aa21.11■□□□□ 0.97
HERC2-204ENST00000563945 FKBP15Q5T1M5 1219 aa21.11■□□□□ 0.97
HERC2-204ENST00000563945 ERAP2Q6P179 960 aa21.11■□□□□ 0.97
HERC2-204ENST00000563945 JAMLQ86YT9 394 aa21.11■□□□□ 0.97
HERC2-204ENST00000563945 PAF1Q8N7H5 531 aa21.11■□□□□ 0.97
HERC2-204ENST00000563945 RTL3Q8N8U3 475 aaKnown RBP21.11■□□□□ 0.97
HERC2-204ENST00000563945 TP53I13Q8NBR0 393 aaPredicted RBP21.11■□□□□ 0.97
HERC2-204ENST00000563945 OR6C4Q8NGE1 309 aa21.11■□□□□ 0.97
HERC2-204ENST00000563945 CENPIQ92674 756 aaPredicted RBP21.11■□□□□ 0.97
HERC2-204ENST00000563945 TSACCQ96A04 125 aaPredicted RBP21.11■□□□□ 0.97
HERC2-204ENST00000563945 PRR11Q96HE9 360 aaPredicted RBP21.11■□□□□ 0.97
HERC2-204ENST00000563945 CPEB1Q9BZB8 566 aaKnown RBP21.11■□□□□ 0.97
HERC2-204ENST00000563945 EDEM3Q9BZQ6 932 aa21.11■□□□□ 0.97
HERC2-204ENST00000563945 GPR34Q9UPC5 381 aa21.11■□□□□ 0.97
HERC2-204ENST00000563945 COL6A6A6NMZ7 2263 aa21.11■□□□□ 0.97
HERC2-204ENST00000563945 B8ZZF3 427 aa21.1■□□□□ 0.97
HERC2-204ENST00000563945 RASA4BC9J798 803 aa21.1■□□□□ 0.97
HERC2-204ENST00000563945 PLD2O14939 933 aa21.1■□□□□ 0.97
HERC2-204ENST00000563945 RASA4O43374 803 aa21.1■□□□□ 0.97
HERC2-204ENST00000563945 CREB3O43889 395 aa21.1■□□□□ 0.97
HERC2-204ENST00000563945 GJB6O95452 261 aa21.1■□□□□ 0.97
HERC2-204ENST00000563945 TNFP01375 233 aa21.1■□□□□ 0.97
HERC2-204ENST00000563945 CALB1P05937 261 aa21.1■□□□□ 0.97
HERC2-204ENST00000563945 ITGA2BP08514 1039 aa21.1■□□□□ 0.97
HERC2-204ENST00000563945 RFC1P35251 1148 aaPredicted RBP21.1■□□□□ 0.97
HERC2-204ENST00000563945 SOX5P35711 763 aa21.1■□□□□ 0.97
HERC2-204ENST00000563945 STAT1P42224 750 aa21.1■□□□□ 0.97
HERC2-204ENST00000563945 EIF3IQ13347 325 aaKnown RBP21.1■□□□□ 0.97
HERC2-204ENST00000563945 IRF4Q15306 451 aa21.1■□□□□ 0.97
HERC2-204ENST00000563945 TCEA2Q15560 299 aa21.1■□□□□ 0.97
HERC2-204ENST00000563945 PARP15Q460N3 678 aa21.1■□□□□ 0.97
HERC2-204ENST00000563945 TMEM52BQ4KMG9 183 aa21.1■□□□□ 0.97
HERC2-204ENST00000563945 CT47A1Q5JQC4 288 aaPredicted RBP21.1■□□□□ 0.97
HERC2-204ENST00000563945 KIAA1614Q5VZ46 1190 aa21.1■□□□□ 0.97
HERC2-204ENST00000563945 RAB11FIP2Q7L804 512 aa21.1■□□□□ 0.97
HERC2-204ENST00000563945 CLEC14AQ86T13 490 aa21.1■□□□□ 0.97
HERC2-204ENST00000563945 NETO2Q8NC67 525 aa21.1■□□□□ 0.97
HERC2-204ENST00000563945 HCAR2Q8TDS4 363 aa21.1■□□□□ 0.97
HERC2-204ENST00000563945 TTC9Q92623 222 aa21.1■□□□□ 0.97
HERC2-204ENST00000563945 MED8Q96G25 268 aa21.1■□□□□ 0.97
HERC2-204ENST00000563945 LIN37Q96GY3 246 aaPredicted RBP21.1■□□□□ 0.97
HERC2-204ENST00000563945 PCMTD1Q96MG8 357 aaPredicted RBP21.1■□□□□ 0.97
HERC2-204ENST00000563945 CCNL2Q96S94 520 aaPredicted RBP21.1■□□□□ 0.97
HERC2-204ENST00000563945 VPS16Q9H269 839 aa21.1■□□□□ 0.97
HERC2-204ENST00000563945 NLRC4Q9NPP4 1024 aa21.1■□□□□ 0.97
HERC2-204ENST00000563945 FAM207AQ9NSI2 230 aaPredicted RBP21.1■□□□□ 0.97
HERC2-204ENST00000563945 DONSONQ9NYP3 566 aa21.1■□□□□ 0.97
HERC2-204ENST00000563945 KLQ9UEF7 1012 aa21.1■□□□□ 0.97
HERC2-204ENST00000563945 DAAM1Q9Y4D1 1078 aa21.1■□□□□ 0.97
HERC2-204ENST00000563945 CHRNB2P17787 502 aa21.09■□□□□ 0.97
HERC2-204ENST00000563945 INHBCP55103 352 aa21.09■□□□□ 0.97
HERC2-204ENST00000563945 SKOR1P84550 965 aa21.09■□□□□ 0.97
HERC2-204ENST00000563945 DNAAF5Q86Y56 855 aa21.09■□□□□ 0.97
HERC2-204ENST00000563945 PYROXD2Q8N2H3 581 aa21.09■□□□□ 0.97
HERC2-204ENST00000563945 PCDH19Q8TAB3 1148 aa21.09■□□□□ 0.97
HERC2-204ENST00000563945 CCDC74AQ96AQ1 378 aa21.09■□□□□ 0.97
HERC2-204ENST00000563945 HMCESQ96FZ2 354 aa21.09■□□□□ 0.97
HERC2-204ENST00000563945 TMEM74Q96NL1 305 aa21.09■□□□□ 0.97
HERC2-204ENST00000563945 APOOQ9BUR5 198 aa21.09■□□□□ 0.97
HERC2-204ENST00000563945 SUV39H2Q9H5I1 410 aa21.09■□□□□ 0.97
HERC2-204ENST00000563945 SEPT11Q9NVA2 429 aaKnown RBP21.09■□□□□ 0.97
HERC2-204ENST00000563945 UBA2Q9UBT2 640 aaPredicted RBP21.09■□□□□ 0.97
HERC2-204ENST00000563945 PNMA8BQ9ULN7 279 aaPredicted RBP21.09■□□□□ 0.97
HERC2-204ENST00000563945 COQ6Q9Y2Z9 468 aa21.09■□□□□ 0.97
HERC2-204ENST00000563945 GTF3C3Q9Y5Q9 886 aa21.09■□□□□ 0.97
HERC2-204ENST00000563945 NTN3O00634 580 aaPredicted RBP21.08■□□□□ 0.97
HERC2-204ENST00000563945 RPLP0P05388 317 aaKnown RBP21.08■□□□□ 0.97
HERC2-204ENST00000563945 CELA2BP08218 269 aaPredicted RBP21.08■□□□□ 0.97
HERC2-204ENST00000563945 JMJD7P0C870 316 aa21.08■□□□□ 0.97
HERC2-204ENST00000563945 SRP54P61011 504 aaKnown RBP21.08■□□□□ 0.97
HERC2-204ENST00000563945 CLN3Q13286 438 aa21.08■□□□□ 0.97
HERC2-204ENST00000563945 SERINC3Q13530 473 aa21.08■□□□□ 0.97
HERC2-204ENST00000563945 INPP5AQ14642 412 aa21.08■□□□□ 0.97
HERC2-204ENST00000563945 NFATC4Q14934 902 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms