RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 GPR34Q9UPC5 381 aa16.15■□□□□ 0.18
RNF40-205ENST00000563909 HS3ST2Q9Y278 367 aa16.15■□□□□ 0.18
RNF40-205ENST00000563909 FADS3Q9Y5Q0 445 aa16.15■□□□□ 0.18
RNF40-205ENST00000563909 M0QYV0 167 aa16.14■□□□□ 0.17
RNF40-205ENST00000563909 EPHB6O15197 1021 aa16.14■□□□□ 0.17
RNF40-205ENST00000563909 FBXO21O94952 628 aa16.14■□□□□ 0.17
RNF40-205ENST00000563909 CCL4P13236 92 aa16.14■□□□□ 0.17
RNF40-205ENST00000563909 ADRB3P13945 408 aa16.14■□□□□ 0.17
RNF40-205ENST00000563909 ITGB7P26010 798 aa16.14■□□□□ 0.17
RNF40-205ENST00000563909 PBX1P40424 430 aa16.14■□□□□ 0.17
RNF40-205ENST00000563909 STAT1P42224 750 aa16.14■□□□□ 0.17
RNF40-205ENST00000563909 PPARDQ03181 441 aa16.14■□□□□ 0.17
RNF40-205ENST00000563909 PTK2Q05397 1052 aa16.14■□□□□ 0.17
RNF40-205ENST00000563909 ELOCQ15369 112 aa16.14■□□□□ 0.17
RNF40-205ENST00000563909 CNGA2Q16280 664 aa16.14■□□□□ 0.17
RNF40-205ENST00000563909 FIGNQ5HY92 759 aa16.14■□□□□ 0.17
RNF40-205ENST00000563909 RABGAP1LQ5R372 815 aa16.14■□□□□ 0.17
RNF40-205ENST00000563909 TTC39BQ5VTQ0 682 aaPredicted RBP16.14■□□□□ 0.17
RNF40-205ENST00000563909 LVRNQ6Q4G3 990 aa16.14■□□□□ 0.17
RNF40-205ENST00000563909 TAC4Q86UU9 113 aa16.14■□□□□ 0.17
RNF40-205ENST00000563909 TICAM1Q8IUC6 712 aa16.14■□□□□ 0.17
RNF40-205ENST00000563909 SRRM1Q8IYB3 904 aaKnown RBP16.14■□□□□ 0.17
RNF40-205ENST00000563909 FAM71AQ8IYT1 594 aa16.14■□□□□ 0.17
RNF40-205ENST00000563909 FSTL5Q8N475 847 aaPredicted RBP16.14■□□□□ 0.17
RNF40-205ENST00000563909 GPBAR1Q8TDU6 330 aa16.14■□□□□ 0.17
RNF40-205ENST00000563909 EDEM3Q9BZQ6 932 aa16.14■□□□□ 0.17
RNF40-205ENST00000563909 TRIM5Q9C035 493 aa16.14■□□□□ 0.17
RNF40-205ENST00000563909 IL36AQ9UHA7 158 aa16.14■□□□□ 0.17
RNF40-205ENST00000563909 OR51B4Q9Y5P0 310 aa16.14■□□□□ 0.17
RNF40-205ENST00000563909 KCNU1A8MYU2 1149 aa16.13■□□□□ 0.17
RNF40-205ENST00000563909 F8VZ95 297 aa16.13■□□□□ 0.17
RNF40-205ENST00000563909 MED7O43513 233 aa16.13■□□□□ 0.17
RNF40-205ENST00000563909 SMAD6O43541 496 aaKnown RBP16.13■□□□□ 0.17
RNF40-205ENST00000563909 LEFTY1O75610 366 aa16.13■□□□□ 0.17
RNF40-205ENST00000563909 PRKCGP05129 697 aa16.13■□□□□ 0.17
RNF40-205ENST00000563909 PRKAR1AP10644 381 aa16.13■□□□□ 0.17
RNF40-205ENST00000563909 RRM1P23921 792 aa16.13■□□□□ 0.17
RNF40-205ENST00000563909 GNA15P30679 374 aa16.13■□□□□ 0.17
RNF40-205ENST00000563909 RECQLP46063 649 aaPredicted RBP16.13■□□□□ 0.17
RNF40-205ENST00000563909 JAM2P57087 298 aa16.13■□□□□ 0.17
RNF40-205ENST00000563909 CENPCQ03188 943 aa16.13■□□□□ 0.17
RNF40-205ENST00000563909 C16orf72Q14CZ0 275 aa16.13■□□□□ 0.17
RNF40-205ENST00000563909 SYPL2Q5VXT5 272 aa16.13■□□□□ 0.17
RNF40-205ENST00000563909 TMPRSS9Q7Z410 1059 aa16.13■□□□□ 0.17
RNF40-205ENST00000563909 HEATR4Q86WZ0 1026 aa16.13■□□□□ 0.17
RNF40-205ENST00000563909 SLITRK4Q8IW52 837 aa16.13■□□□□ 0.17
RNF40-205ENST00000563909 TEX19Q8NA77 164 aa16.13■□□□□ 0.17
RNF40-205ENST00000563909 APOBEC4Q8WW27 367 aaKnown RBP16.13■□□□□ 0.17
RNF40-205ENST00000563909 FAM149B1Q96BN6 582 aa16.13■□□□□ 0.17
RNF40-205ENST00000563909 PRMT1Q99873 361 aaKnown RBP16.13■□□□□ 0.17
RNF40-205ENST00000563909 ZSWIM1Q9BR11 485 aa16.13■□□□□ 0.17
RNF40-205ENST00000563909 TNKS2Q9H2K2 1166 aa16.13■□□□□ 0.17
RNF40-205ENST00000563909 SEMA6CQ9H3T2 930 aa16.13■□□□□ 0.17
RNF40-205ENST00000563909 ZNF768Q9H5H4 540 aaKnown RBP16.13■□□□□ 0.17
RNF40-205ENST00000563909 AKAP7Q9P0M2 348 aaPredicted RBP16.13■□□□□ 0.17
RNF40-205ENST00000563909 MYO6Q9UM54 1294 aa16.13■□□□□ 0.17
RNF40-205ENST00000563909 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.13■□□□□ 0.17
RNF40-205ENST00000563909 SDK2Q58EX2 2172 aa16.13■□□□□ 0.17
RNF40-205ENST00000563909 NF1P21359 2839 aa16.13■□□□□ 0.17
RNF40-205ENST00000563909 CNTN5O94779 1100 aa16.12■□□□□ 0.17
RNF40-205ENST00000563909 ALPIP09923 528 aa16.12■□□□□ 0.17
RNF40-205ENST00000563909 CTSEP14091 401 aa16.12■□□□□ 0.17
RNF40-205ENST00000563909 UGT1A3P35503 534 aa16.12■□□□□ 0.17
RNF40-205ENST00000563909 CLCN1P35523 988 aa16.12■□□□□ 0.17
RNF40-205ENST00000563909 SOX5P35711 763 aa16.12■□□□□ 0.17
RNF40-205ENST00000563909 ARSDP51689 593 aa16.12■□□□□ 0.17
RNF40-205ENST00000563909 FBXL22Q6P050 247 aa16.12■□□□□ 0.17
RNF40-205ENST00000563909 HID1Q8IV36 788 aa16.12■□□□□ 0.17
RNF40-205ENST00000563909 CACNA2D3Q8IZS8 1091 aa16.12■□□□□ 0.17
RNF40-205ENST00000563909 RPRD1AQ96P16 312 aaPredicted RBP16.12■□□□□ 0.17
RNF40-205ENST00000563909 CDH19Q9H159 772 aa16.12■□□□□ 0.17
RNF40-205ENST00000563909 MUC3BQ9H195 1237 aa16.12■□□□□ 0.17
RNF40-205ENST00000563909 SLC12A6Q9UHW9 1150 aa16.12■□□□□ 0.17
RNF40-205ENST00000563909 APPL1Q9UKG1 709 aa16.12■□□□□ 0.17
RNF40-205ENST00000563909 TP53TG5Q9Y2B4 290 aa16.12■□□□□ 0.17
RNF40-205ENST00000563909 UNC13CQ8NB66 2214 aa16.12■□□□□ 0.17
RNF40-205ENST00000563909 NEMP1O14524 444 aa16.11■□□□□ 0.17
RNF40-205ENST00000563909 CAPN5O15484 640 aaPredicted RBP16.11■□□□□ 0.17
RNF40-205ENST00000563909 SART1O43290 800 aaKnown RBP16.11■□□□□ 0.17
RNF40-205ENST00000563909 THAP12O43422 761 aa16.11■□□□□ 0.17
RNF40-205ENST00000563909 AP1G1O43747 822 aa16.11■□□□□ 0.17
RNF40-205ENST00000563909 DUX1O43812 170 aa16.11■□□□□ 0.17
RNF40-205ENST00000563909 SNAP91O60641 907 aa16.11■□□□□ 0.17
RNF40-205ENST00000563909 ENDOD1O94919 500 aa16.11■□□□□ 0.17
RNF40-205ENST00000563909 CCDC172P0C7W6 258 aa16.11■□□□□ 0.17
RNF40-205ENST00000563909 PNMA6AP0CW24 399 aaPredicted RBP16.11■□□□□ 0.17
RNF40-205ENST00000563909 NR1D1P20393 614 aa16.11■□□□□ 0.17
RNF40-205ENST00000563909 BRD2P25440 801 aaKnown RBP16.11■□□□□ 0.17
RNF40-205ENST00000563909 L1CAMP32004 1257 aa16.11■□□□□ 0.17
RNF40-205ENST00000563909 EIF4A3P38919 411 aaKnown RBP16.11■□□□□ 0.17
RNF40-205ENST00000563909 BLKP51451 505 aa16.11■□□□□ 0.17
RNF40-205ENST00000563909 IRAK1P51617 712 aa16.11■□□□□ 0.17
RNF40-205ENST00000563909 YPEL5P62699 121 aa16.11■□□□□ 0.17
RNF40-205ENST00000563909 KRT83P78385 493 aa16.11■□□□□ 0.17
RNF40-205ENST00000563909 SEPT6Q14141 434 aa16.11■□□□□ 0.17
RNF40-205ENST00000563909 DEFB109BQ30KR1 87 aa16.11■□□□□ 0.17
RNF40-205ENST00000563909 SPECC1LQ69YQ0 1117 aa16.11■□□□□ 0.17
RNF40-205ENST00000563909 MACC1Q6ZN28 852 aa16.11■□□□□ 0.17
RNF40-205ENST00000563909 DPY19L3Q6ZPD9 716 aa16.11■□□□□ 0.17
RNF40-205ENST00000563909 MAMDC2Q7Z304 686 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms