RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 HEATR9A2RTY3 570 aa22.13■■□□□ 1.13
LINC01960-201ENST00000563759 HMGB1P1B2RPK0 211 aaPredicted RBP22.13■■□□□ 1.13
LINC01960-201ENST00000563759 ZNF821O75541 412 aaPredicted RBP22.13■■□□□ 1.13
LINC01960-201ENST00000563759 DLDP09622 509 aaKnown RBP22.13■■□□□ 1.13
LINC01960-201ENST00000563759 PRKCHP24723 683 aa22.13■■□□□ 1.13
LINC01960-201ENST00000563759 ADRA1DP25100 572 aa22.13■■□□□ 1.13
LINC01960-201ENST00000563759 GJA4P35212 333 aa22.13■■□□□ 1.13
LINC01960-201ENST00000563759 CSNK1DP48730 415 aa22.13■■□□□ 1.13
LINC01960-201ENST00000563759 HTR4Q13639 388 aa22.13■■□□□ 1.13
LINC01960-201ENST00000563759 ANKRD20A4Q4UJ75 823 aa22.13■■□□□ 1.13
LINC01960-201ENST00000563759 PKN3Q6P5Z2 889 aa22.13■■□□□ 1.13
LINC01960-201ENST00000563759 MUC22E2RYF6 1773 aaPredicted RBP22.13■■□□□ 1.13
LINC01960-201ENST00000563759 PRUNE2Q8WUY3 3088 aa22.13■■□□□ 1.13
LINC01960-201ENST00000563759 GRXCR2A6NFK2 248 aa22.13■■□□□ 1.13
LINC01960-201ENST00000563759 GSRP00390 522 aa22.13■■□□□ 1.13
LINC01960-201ENST00000563759 GCAP28676 217 aa22.13■■□□□ 1.13
LINC01960-201ENST00000563759 BCL2L1Q07817 233 aa22.13■■□□□ 1.13
LINC01960-201ENST00000563759 TMED2Q15363 201 aa22.13■■□□□ 1.13
LINC01960-201ENST00000563759 ITPRIPL2Q3MIP1 535 aa22.13■■□□□ 1.13
LINC01960-201ENST00000563759 AGBL2Q5U5Z8 902 aa22.13■■□□□ 1.13
LINC01960-201ENST00000563759 PPM1NQ8N819 430 aa22.13■■□□□ 1.13
LINC01960-201ENST00000563759 BLOC1S5Q8TDH9 187 aa22.13■■□□□ 1.13
LINC01960-201ENST00000563759 CERS2Q96G23 380 aa22.13■■□□□ 1.13
LINC01960-201ENST00000563759 FCRL3Q96P31 734 aaPredicted RBP22.13■■□□□ 1.13
LINC01960-201ENST00000563759 ATP13A3Q9H7F0 1226 aa22.13■■□□□ 1.13
LINC01960-201ENST00000563759 BRD9Q9H8M2 597 aa22.13■■□□□ 1.13
LINC01960-201ENST00000563759 MRM3Q9HC36 420 aaKnown RBP22.13■■□□□ 1.13
LINC01960-201ENST00000563759 VPS18Q9P253 973 aa22.13■■□□□ 1.13
LINC01960-201ENST00000563759 PSMC3IPQ9P2W1 217 aaPredicted RBP22.13■■□□□ 1.13
LINC01960-201ENST00000563759 TCF20Q9UGU0 1960 aaKnown RBP22.12■■□□□ 1.13
LINC01960-201ENST00000563759 ALDH1A2O94788 518 aa22.12■■□□□ 1.13
LINC01960-201ENST00000563759 PDHA1P08559 390 aa22.12■■□□□ 1.13
LINC01960-201ENST00000563759 ALADP13716 330 aa22.12■■□□□ 1.13
LINC01960-201ENST00000563759 NMBRP28336 390 aa22.12■■□□□ 1.13
LINC01960-201ENST00000563759 MSH2P43246 934 aa22.12■■□□□ 1.13
LINC01960-201ENST00000563759 RECQLP46063 649 aaPredicted RBP22.12■■□□□ 1.13
LINC01960-201ENST00000563759 MESP2Q0VG99 397 aa22.12■■□□□ 1.13
LINC01960-201ENST00000563759 SMAD4Q13485 552 aaKnown RBP22.12■■□□□ 1.13
LINC01960-201ENST00000563759 SMAD1Q15797 465 aaKnown RBP22.12■■□□□ 1.13
LINC01960-201ENST00000563759 ARMC3Q5W041 872 aa22.12■■□□□ 1.13
LINC01960-201ENST00000563759 Q6ZVU0 165 aa22.12■■□□□ 1.13
LINC01960-201ENST00000563759 LRRC6Q86X45 466 aa22.12■■□□□ 1.13
LINC01960-201ENST00000563759 TDRPQ86YL5 185 aa22.12■■□□□ 1.13
LINC01960-201ENST00000563759 UNC5BQ8IZJ1 945 aa22.12■■□□□ 1.13
LINC01960-201ENST00000563759 CDKL2Q92772 493 aa22.12■■□□□ 1.13
LINC01960-201ENST00000563759 MYO19Q96H55 970 aa22.12■■□□□ 1.13
LINC01960-201ENST00000563759 MOCS1Q9NZB8 636 aa22.12■■□□□ 1.13
LINC01960-201ENST00000563759 NOVA2Q9UNW9 492 aaKnown RBP22.12■■□□□ 1.13
LINC01960-201ENST00000563759 FAM169AQ9Y6X4 670 aa22.12■■□□□ 1.13
LINC01960-201ENST00000563759 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.11■■□□□ 1.13
LINC01960-201ENST00000563759 PIGNO95427 931 aa22.11■■□□□ 1.13
LINC01960-201ENST00000563759 SRPRAP08240 638 aaKnown RBP22.11■■□□□ 1.13
LINC01960-201ENST00000563759 INHBAP08476 426 aa22.11■■□□□ 1.13
LINC01960-201ENST00000563759 ATP5DP30049 168 aa22.11■■□□□ 1.13
LINC01960-201ENST00000563759 EPHB1P54762 984 aa22.11■■□□□ 1.13
LINC01960-201ENST00000563759 ST8SIA6P61647 398 aa22.11■■□□□ 1.13
LINC01960-201ENST00000563759 EIF4HQ15056 248 aaKnown RBP22.11■■□□□ 1.13
LINC01960-201ENST00000563759 ARMC12Q5T9G4 340 aa22.11■■□□□ 1.13
LINC01960-201ENST00000563759 Q7L0L9 218 aa22.11■■□□□ 1.13
LINC01960-201ENST00000563759 RASSF3Q86WH2 238 aa22.11■■□□□ 1.13
LINC01960-201ENST00000563759 CAMK1DQ8IU85 385 aa22.11■■□□□ 1.13
LINC01960-201ENST00000563759 TERB1Q8NA31 727 aa22.11■■□□□ 1.13
LINC01960-201ENST00000563759 PPM1EQ8WY54 764 aa22.11■■□□□ 1.13
LINC01960-201ENST00000563759 NXPE3Q969Y0 559 aa22.11■■□□□ 1.13
LINC01960-201ENST00000563759 MRGPRX3Q96LB0 322 aa22.11■■□□□ 1.13
LINC01960-201ENST00000563759 ZNF778Q96MU6 729 aa22.11■■□□□ 1.13
LINC01960-201ENST00000563759 RANBP9Q96S59 729 aa22.11■■□□□ 1.13
LINC01960-201ENST00000563759 ELOVL2Q9NXB9 296 aa22.11■■□□□ 1.13
LINC01960-201ENST00000563759 IL1RAPL1Q9NZN1 696 aa22.11■■□□□ 1.13
LINC01960-201ENST00000563759 PRKAG3Q9UGI9 489 aa22.11■■□□□ 1.13
LINC01960-201ENST00000563759 LGALS13Q9UHV8 139 aa22.11■■□□□ 1.13
LINC01960-201ENST00000563759 PCDHB9Q9Y5E1 797 aa22.11■■□□□ 1.13
LINC01960-201ENST00000563759 ZCWPW2A0A1B0GU75 182 aa22.11■■□□□ 1.13
LINC01960-201ENST00000563759 FAM159BA6NKW6 160 aa22.11■■□□□ 1.13
LINC01960-201ENST00000563759 ANHXE9PGG2 379 aa22.11■■□□□ 1.13
LINC01960-201ENST00000563759 SOCS5O75159 536 aa22.11■■□□□ 1.13
LINC01960-201ENST00000563759 PRLP01236 227 aa22.11■■□□□ 1.13
LINC01960-201ENST00000563759 C1QAP02745 245 aa22.11■■□□□ 1.13
LINC01960-201ENST00000563759 PRKCGP05129 697 aa22.11■■□□□ 1.13
LINC01960-201ENST00000563759 PIRTP0C851 137 aa22.11■■□□□ 1.13
LINC01960-201ENST00000563759 SERPINA4P29622 427 aa22.11■■□□□ 1.13
LINC01960-201ENST00000563759 GKP32189 559 aa22.11■■□□□ 1.13
LINC01960-201ENST00000563759 OPRD1P41143 372 aa22.11■■□□□ 1.13
LINC01960-201ENST00000563759 CCNHP51946 323 aaPredicted RBP22.11■■□□□ 1.13
LINC01960-201ENST00000563759 CARD16Q5EG05 197 aa22.11■■□□□ 1.13
LINC01960-201ENST00000563759 CYS1Q717R9 158 aa22.11■■□□□ 1.13
LINC01960-201ENST00000563759 CDX2Q99626 313 aaPredicted RBP22.11■■□□□ 1.13
LINC01960-201ENST00000563759 ZFATQ9P243 1243 aa22.11■■□□□ 1.13
LINC01960-201ENST00000563759 PLA2G4CQ9UP65 541 aa22.11■■□□□ 1.13
LINC01960-201ENST00000563759 CXorf49A8MYA2 514 aaPredicted RBP22.1■■□□□ 1.13
LINC01960-201ENST00000563759 PRRT4C9JH25 899 aa22.1■■□□□ 1.13
LINC01960-201ENST00000563759 PAMP19021 973 aa22.1■■□□□ 1.13
LINC01960-201ENST00000563759 RAD51Q06609 339 aa22.1■■□□□ 1.13
LINC01960-201ENST00000563759 MGAT5Q09328 741 aa22.1■■□□□ 1.13
LINC01960-201ENST00000563759 NAIF1Q69YI7 327 aaPredicted RBP22.1■■□□□ 1.13
LINC01960-201ENST00000563759 SLC44A1Q8WWI5 657 aa22.1■■□□□ 1.13
LINC01960-201ENST00000563759 ZDHHC6Q9H6R6 413 aa22.1■■□□□ 1.13
LINC01960-201ENST00000563759 SMYD2Q9NRG4 433 aa22.1■■□□□ 1.13
LINC01960-201ENST00000563759 EURLQ9NYK6 297 aa22.1■■□□□ 1.13
LINC01960-201ENST00000563759 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms