RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 TIMP2P16035 220 aa10.48□□□□□ -0.73
SF3B3-204ENST00000563739 NOS2P35228 1153 aa10.48□□□□□ -0.73
SF3B3-204ENST00000563739 FLT3P36888 993 aa10.48□□□□□ -0.73
SF3B3-204ENST00000563739 CD97P48960 835 aa10.48□□□□□ -0.73
SF3B3-204ENST00000563739 THOP1P52888 689 aa10.48□□□□□ -0.73
SF3B3-204ENST00000563739 MAPK10P53779 464 aa10.48□□□□□ -0.73
SF3B3-204ENST00000563739 GNA12Q03113 381 aa10.48□□□□□ -0.73
SF3B3-204ENST00000563739 CCDC15Q0P6D6 951 aa10.48□□□□□ -0.73
SF3B3-204ENST00000563739 SGCGQ13326 291 aa10.48□□□□□ -0.73
SF3B3-204ENST00000563739 NFATC4Q14934 902 aa10.48□□□□□ -0.73
SF3B3-204ENST00000563739 KLHL40Q2TBA0 621 aa10.48□□□□□ -0.73
SF3B3-204ENST00000563739 BRMS1LQ5PSV4 323 aa10.48□□□□□ -0.73
SF3B3-204ENST00000563739 FAXCQ5TGI0 409 aa10.48□□□□□ -0.73
SF3B3-204ENST00000563739 DPY19L2P1Q6NXN4 242 aa10.48□□□□□ -0.73
SF3B3-204ENST00000563739 LVRNQ6Q4G3 990 aa10.48□□□□□ -0.73
SF3B3-204ENST00000563739 LEKR1Q6ZMV7 388 aa10.48□□□□□ -0.73
SF3B3-204ENST00000563739 C11orf57Q6ZUT1 292 aaPredicted RBP10.48□□□□□ -0.73
SF3B3-204ENST00000563739 ZNF438Q7Z4V0 828 aa10.48□□□□□ -0.73
SF3B3-204ENST00000563739 HID1Q8IV36 788 aa10.48□□□□□ -0.73
SF3B3-204ENST00000563739 FMR1NBQ8N0W7 255 aaPredicted RBP10.48□□□□□ -0.73
SF3B3-204ENST00000563739 Q8N9G6 341 aaPredicted RBP10.48□□□□□ -0.73
SF3B3-204ENST00000563739 PLA2G15Q8NCC3 412 aa10.48□□□□□ -0.73
SF3B3-204ENST00000563739 SHC3Q92529 594 aa10.48□□□□□ -0.73
SF3B3-204ENST00000563739 GLMNQ92990 594 aa10.48□□□□□ -0.73
SF3B3-204ENST00000563739 ISG20Q96AZ6 181 aaKnown RBP10.48□□□□□ -0.73
SF3B3-204ENST00000563739 SPATA32Q96LK8 384 aa10.48□□□□□ -0.73
SF3B3-204ENST00000563739 KLHL32Q96NJ5 620 aa10.48□□□□□ -0.73
SF3B3-204ENST00000563739 PPP1R9BQ96SB3 815 aa10.48□□□□□ -0.73
SF3B3-204ENST00000563739 NUDT22Q9BRQ3 303 aa10.48□□□□□ -0.73
SF3B3-204ENST00000563739 WRAP53Q9BUR4 548 aaKnown RBP10.48□□□□□ -0.73
SF3B3-204ENST00000563739 SLC13A1Q9BZW2 595 aa10.48□□□□□ -0.73
SF3B3-204ENST00000563739 SPRY4Q9C004 299 aa10.48□□□□□ -0.73
SF3B3-204ENST00000563739 STRADBQ9C0K7 418 aa10.48□□□□□ -0.73
SF3B3-204ENST00000563739 NOL6Q9H6R4 1146 aaKnown RBP10.48□□□□□ -0.73
SF3B3-204ENST00000563739 ATP13A1Q9HD20 1204 aa10.48□□□□□ -0.73
SF3B3-204ENST00000563739 FAM170AA1A519 330 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 TSPAN11A1L157 253 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 TMEM202A6NGA9 273 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 FAM72CH0Y354 149 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 INSIG1O15503 277 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 GSRP00390 522 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 OR1E1P30953 314 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 CSF2RBP32927 897 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 UQCRFS1P47985 274 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 MARSP56192 900 aaKnown RBP10.47□□□□□ -0.73
SF3B3-204ENST00000563739 SLC6A3Q01959 620 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 SERINC3Q13530 473 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 PTK2BQ14289 1009 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 NR1D2Q14995 579 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 ELOCQ15369 112 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 TMEM52BQ4KMG9 183 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 EFHC1Q5JVL4 640 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 FAM72AQ5TYM5 149 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 FAM72DQ6L9T8 149 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 BORAQ6PGQ7 559 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 ZNF783Q6ZMS7 281 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 FAM72BQ86X60 149 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 NRROSQ86YC3 692 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 DRC7Q8IY82 874 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 FAM26EQ8N5C1 309 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 RCBTB1Q8NDN9 531 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 OR2AP1Q8NGE2 309 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 PTCD2Q8WV60 388 aaKnown RBP10.47□□□□□ -0.73
SF3B3-204ENST00000563739 CCDC47Q96A33 483 aaKnown RBP10.47□□□□□ -0.73
SF3B3-204ENST00000563739 C1orf74Q96LT6 269 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 CEP63Q96MT8 703 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 SPON2Q9BUD6 331 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 GTPBP4Q9BZE4 634 aaKnown RBP10.47□□□□□ -0.73
SF3B3-204ENST00000563739 B3GNT4Q9C0J1 378 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 RDH14Q9HBH5 336 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 GDPD2Q9HCC8 539 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 SIX2Q9NPC8 291 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 MRPL40Q9NQ50 206 aaKnown RBP10.47□□□□□ -0.73
SF3B3-204ENST00000563739 PLCB1Q9NQ66 1216 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 TUBD1Q9UJT1 453 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 OR1A2Q9Y585 309 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 PCDHGA3Q9Y5H0 932 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 DGKBQ9Y6T7 804 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 FBN3Q75N90 2809 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 OTOGQ6ZRI0 2925 aa10.47□□□□□ -0.73
SF3B3-204ENST00000563739 TNRC6AQ8NDV7 1962 aaKnown RBP10.46□□□□□ -0.73
SF3B3-204ENST00000563739 AKAP9Q99996 3911 aa10.46□□□□□ -0.73
SF3B3-204ENST00000563739 IGHV5-10-1A0A0J9YXX1 117 aa10.46□□□□□ -0.73
SF3B3-204ENST00000563739 CXorf51AA0A1B0GTR3 108 aa10.46□□□□□ -0.73
SF3B3-204ENST00000563739 TMX2-CTNND1H3BSU7 103 aa10.46□□□□□ -0.73
SF3B3-204ENST00000563739 TOR1BO14657 336 aa10.46□□□□□ -0.73
SF3B3-204ENST00000563739 RASGRP1O95267 797 aa10.46□□□□□ -0.73
SF3B3-204ENST00000563739 FUCA1P04066 466 aa10.46□□□□□ -0.73
SF3B3-204ENST00000563739 PNLIPP16233 465 aa10.46□□□□□ -0.73
SF3B3-204ENST00000563739 GLB1P16278 677 aa10.46□□□□□ -0.73
SF3B3-204ENST00000563739 NR1D1P20393 614 aa10.46□□□□□ -0.73
SF3B3-204ENST00000563739 OAS2P29728 719 aaKnown RBP10.46□□□□□ -0.73
SF3B3-204ENST00000563739 UGT1A3P35503 534 aa10.46□□□□□ -0.73
SF3B3-204ENST00000563739 RECQLP46063 649 aaPredicted RBP10.46□□□□□ -0.73
SF3B3-204ENST00000563739 CCR10P46092 362 aa10.46□□□□□ -0.73
SF3B3-204ENST00000563739 SULT1E1P49888 294 aa10.46□□□□□ -0.73
SF3B3-204ENST00000563739 PEX5P50542 639 aa10.46□□□□□ -0.73
SF3B3-204ENST00000563739 DNA2P51530 1060 aa10.46□□□□□ -0.73
SF3B3-204ENST00000563739 MAZP56270 477 aaKnown RBP10.46□□□□□ -0.73
SF3B3-204ENST00000563739 SRP54P61011 504 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms