RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 RHOAP61586 193 aa16.98■□□□□ 0.31
HDGFL3-203ENST00000563404 CLEC16AQ2KHT3 1053 aa16.98■□□□□ 0.31
HDGFL3-203ENST00000563404 WSCD2Q2TBF2 565 aa16.98■□□□□ 0.31
HDGFL3-203ENST00000563404 TMEM52BQ4KMG9 183 aa16.98■□□□□ 0.31
HDGFL3-203ENST00000563404 INO80DQ53TQ3 878 aaPredicted RBP16.98■□□□□ 0.31
HDGFL3-203ENST00000563404 KCTD16Q68DU8 428 aa16.98■□□□□ 0.31
HDGFL3-203ENST00000563404 TRIM72Q6ZMU5 477 aa16.98■□□□□ 0.31
HDGFL3-203ENST00000563404 SLFN11Q7Z7L1 901 aa16.98■□□□□ 0.31
HDGFL3-203ENST00000563404 ZNF605Q86T29 641 aa16.98■□□□□ 0.31
HDGFL3-203ENST00000563404 ZNF354CQ86Y25 554 aa16.98■□□□□ 0.31
HDGFL3-203ENST00000563404 PHF13Q86YI8 300 aaPredicted RBP16.98■□□□□ 0.31
HDGFL3-203ENST00000563404 ENOX1Q8TC92 643 aaKnown RBP16.98■□□□□ 0.31
HDGFL3-203ENST00000563404 SNRNP27Q8WVK2 155 aaKnown RBP16.98■□□□□ 0.31
HDGFL3-203ENST00000563404 TTC9Q92623 222 aa16.98■□□□□ 0.31
HDGFL3-203ENST00000563404 GRAMD1AQ96CP6 724 aa16.98■□□□□ 0.31
HDGFL3-203ENST00000563404 EXOC2Q96KP1 924 aa16.98■□□□□ 0.31
HDGFL3-203ENST00000563404 SLC13A1Q9BZW2 595 aa16.98■□□□□ 0.31
HDGFL3-203ENST00000563404 NUP62CLQ9H1M0 184 aa16.98■□□□□ 0.31
HDGFL3-203ENST00000563404 RABGEF1Q9UJ41 708 aa16.98■□□□□ 0.31
HDGFL3-203ENST00000563404 PADI4Q9UM07 663 aa16.98■□□□□ 0.31
HDGFL3-203ENST00000563404 NTN3O00634 580 aaPredicted RBP16.97■□□□□ 0.31
HDGFL3-203ENST00000563404 RBMS1P29558 406 aaKnown RBP16.97■□□□□ 0.31
HDGFL3-203ENST00000563404 NSFP46459 744 aaKnown RBP16.97■□□□□ 0.31
HDGFL3-203ENST00000563404 RPIAP49247 311 aa16.97■□□□□ 0.31
HDGFL3-203ENST00000563404 RHDQ02161 417 aa16.97■□□□□ 0.31
HDGFL3-203ENST00000563404 PPARDQ03181 441 aa16.97■□□□□ 0.31
HDGFL3-203ENST00000563404 RAD51Q06609 339 aa16.97■□□□□ 0.31
HDGFL3-203ENST00000563404 VAC14Q08AM6 782 aa16.97■□□□□ 0.31
HDGFL3-203ENST00000563404 SERINC3Q13530 473 aa16.97■□□□□ 0.31
HDGFL3-203ENST00000563404 TCEA2Q15560 299 aa16.97■□□□□ 0.31
HDGFL3-203ENST00000563404 ALG11Q2TAA5 492 aa16.97■□□□□ 0.31
HDGFL3-203ENST00000563404 TAF1BQ53T94 588 aaPredicted RBP16.97■□□□□ 0.31
HDGFL3-203ENST00000563404 CT47A1Q5JQC4 288 aaPredicted RBP16.97■□□□□ 0.31
HDGFL3-203ENST00000563404 FOXR1Q6PIV2 292 aa16.97■□□□□ 0.31
HDGFL3-203ENST00000563404 MON1BQ7L1V2 547 aa16.97■□□□□ 0.31
HDGFL3-203ENST00000563404 KYQ8NBH2 561 aa16.97■□□□□ 0.31
HDGFL3-203ENST00000563404 C3orf20Q8ND61 904 aa16.97■□□□□ 0.31
HDGFL3-203ENST00000563404 CASKIN2Q8WXE0 1202 aa16.97■□□□□ 0.31
HDGFL3-203ENST00000563404 GLMNQ92990 594 aa16.97■□□□□ 0.31
HDGFL3-203ENST00000563404 TSACCQ96A04 125 aaPredicted RBP16.97■□□□□ 0.31
HDGFL3-203ENST00000563404 SELENOOQ9BVL4 669 aa16.97■□□□□ 0.31
HDGFL3-203ENST00000563404 CPEB1Q9BZB8 566 aaKnown RBP16.97■□□□□ 0.31
HDGFL3-203ENST00000563404 FZD10Q9ULW2 581 aa16.97■□□□□ 0.31
HDGFL3-203ENST00000563404 LRRK1Q38SD2 2015 aa16.96■□□□□ 0.31
HDGFL3-203ENST00000563404 TSPAN11A1L157 253 aa16.96■□□□□ 0.31
HDGFL3-203ENST00000563404 SIGLEC16A6NMB1 481 aa16.96■□□□□ 0.31
HDGFL3-203ENST00000563404 WASH4PA8MWX3 477 aa16.96■□□□□ 0.31
HDGFL3-203ENST00000563404 GOLGA6L22H0YM25 854 aa16.96■□□□□ 0.31
HDGFL3-203ENST00000563404 TOR1BO14657 336 aa16.96■□□□□ 0.31
HDGFL3-203ENST00000563404 CREB3O43889 395 aa16.96■□□□□ 0.31
HDGFL3-203ENST00000563404 BUB1BO60566 1050 aaPredicted RBP16.96■□□□□ 0.31
HDGFL3-203ENST00000563404 STAT1P42224 750 aa16.96■□□□□ 0.31
HDGFL3-203ENST00000563404 HK3P52790 923 aa16.96■□□□□ 0.31
HDGFL3-203ENST00000563404 RPL7AP62424 266 aaKnown RBP16.96■□□□□ 0.31
HDGFL3-203ENST00000563404 LY6DQ14210 128 aa16.96■□□□□ 0.31
HDGFL3-203ENST00000563404 LRRC14Q15048 493 aa16.96■□□□□ 0.31
HDGFL3-203ENST00000563404 SCYL2Q6P3W7 929 aa16.96■□□□□ 0.31
HDGFL3-203ENST00000563404 B3GNT8Q7Z7M8 397 aa16.96■□□□□ 0.31
HDGFL3-203ENST00000563404 CLEC14AQ86T13 490 aa16.96■□□□□ 0.31
HDGFL3-203ENST00000563404 ZSWIM9Q86XI8 627 aa16.96■□□□□ 0.31
HDGFL3-203ENST00000563404 WDR36Q8NI36 951 aaKnown RBP16.96■□□□□ 0.31
HDGFL3-203ENST00000563404 NAT6Q93015 286 aa16.96■□□□□ 0.31
HDGFL3-203ENST00000563404 WBP1Q96G27 269 aa16.96■□□□□ 0.31
HDGFL3-203ENST00000563404 C1QTNF7Q9BXJ2 289 aa16.96■□□□□ 0.31
HDGFL3-203ENST00000563404 PDFQ9HBH1 243 aa16.96■□□□□ 0.31
HDGFL3-203ENST00000563404 PCDH12Q9NPG4 1184 aa16.96■□□□□ 0.31
HDGFL3-203ENST00000563404 SIRPGQ9P1W8 387 aa16.96■□□□□ 0.31
HDGFL3-203ENST00000563404 GULP1Q9UBP9 304 aa16.96■□□□□ 0.31
HDGFL3-203ENST00000563404 J3KR12 359 aa16.95■□□□□ 0.3
HDGFL3-203ENST00000563404 TNFSF15O95150 251 aa16.95■□□□□ 0.3
HDGFL3-203ENST00000563404 PRKCGP05129 697 aa16.95■□□□□ 0.3
HDGFL3-203ENST00000563404 C6P13671 934 aa16.95■□□□□ 0.3
HDGFL3-203ENST00000563404 PEX5P50542 639 aa16.95■□□□□ 0.3
HDGFL3-203ENST00000563404 ZNF143P52747 638 aaPredicted RBP16.95■□□□□ 0.3
HDGFL3-203ENST00000563404 YBEYP58557 167 aaPredicted RBP16.95■□□□□ 0.3
HDGFL3-203ENST00000563404 CLN3Q13286 438 aa16.95■□□□□ 0.3
HDGFL3-203ENST00000563404 SPIDRQ14159 915 aa16.95■□□□□ 0.3
HDGFL3-203ENST00000563404 PARP15Q460N3 678 aa16.95■□□□□ 0.3
HDGFL3-203ENST00000563404 EFHC2Q5JST6 749 aa16.95■□□□□ 0.3
HDGFL3-203ENST00000563404 PPP1R15BQ5SWA1 713 aa16.95■□□□□ 0.3
HDGFL3-203ENST00000563404 ESRP1Q6NXG1 681 aaKnown RBP16.95■□□□□ 0.3
HDGFL3-203ENST00000563404 HID1Q8IV36 788 aa16.95■□□□□ 0.3
HDGFL3-203ENST00000563404 UMODL1-AS1Q8N2C9 162 aa16.95■□□□□ 0.3
HDGFL3-203ENST00000563404 FSTL5Q8N475 847 aaPredicted RBP16.95■□□□□ 0.3
HDGFL3-203ENST00000563404 ARL10Q8N8L6 244 aa16.95■□□□□ 0.3
HDGFL3-203ENST00000563404 PCDH19Q8TAB3 1148 aa16.95■□□□□ 0.3
HDGFL3-203ENST00000563404 CCDC74AQ96AQ1 378 aa16.95■□□□□ 0.3
HDGFL3-203ENST00000563404 APOOQ9BUR5 198 aa16.95■□□□□ 0.3
HDGFL3-203ENST00000563404 EDEM3Q9BZQ6 932 aa16.95■□□□□ 0.3
HDGFL3-203ENST00000563404 SUV39H2Q9H5I1 410 aa16.95■□□□□ 0.3
HDGFL3-203ENST00000563404 LRRC19Q9H756 370 aa16.95■□□□□ 0.3
HDGFL3-203ENST00000563404 SYNDIG1Q9H7V2 258 aa16.95■□□□□ 0.3
HDGFL3-203ENST00000563404 OR1A2Q9Y585 309 aa16.95■□□□□ 0.3
HDGFL3-203ENST00000563404 LRP4O75096 1905 aa16.95■□□□□ 0.3
HDGFL3-203ENST00000563404 CCDC187A0A096LP49 1063 aa16.94■□□□□ 0.3
HDGFL3-203ENST00000563404 K7ENP7 123 aa16.94■□□□□ 0.3
HDGFL3-203ENST00000563404 CALB1P05937 261 aa16.94■□□□□ 0.3
HDGFL3-203ENST00000563404 RGRP47804 291 aa16.94■□□□□ 0.3
HDGFL3-203ENST00000563404 CCL7P80098 99 aa16.94■□□□□ 0.3
HDGFL3-203ENST00000563404 OGDHQ02218 1023 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms