RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 PRF1P14222 555 aa7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 ITIH2P19823 946 aa7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 SYT1P21579 422 aa7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 CD1CP29017 333 aa7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 CSF2RBP32927 897 aa7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 LIMK2P53671 638 aa7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 OR1D5P58170 312 aa7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 SRP54P61011 504 aaKnown RBP7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 CUL4AQ13619 759 aa7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 SEPT6Q14141 434 aa7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 STK38Q15208 465 aa7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 CLPPQ16740 277 aaPredicted RBP7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 KLHL40Q2TBA0 621 aa7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 WSCD2Q2TBF2 565 aa7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 EDRF1Q3B7T1 1238 aa7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 OTUD1Q5VV17 481 aaPredicted RBP7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 FOXR2Q6PJQ5 311 aa7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 TMEM270Q6UE05 265 aa7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 ENPP7Q6UWV6 458 aa7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 ASB18Q6ZVZ8 466 aa7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 PIM3Q86V86 326 aa7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 UNC5BQ8IZJ1 945 aa7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 OR7D4Q8NG98 312 aa7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 CPT1CQ8TCG5 803 aa7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 STARD8Q92502 1023 aa7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 SLC4A5Q9BY07 1137 aa7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 ZDHHC6Q9H6R6 413 aa7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 GPN2Q9H9Y4 310 aaPredicted RBP7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 CASS4Q9NQ75 786 aa7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 EXOC1Q9NV70 894 aa7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 OCIAD1Q9NX40 245 aa7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 DONSONQ9NYP3 566 aa7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 AKAP7Q9P0M2 348 aaPredicted RBP7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 SLC12A6Q9UHW9 1150 aa7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 DGKBQ9Y6T7 804 aa7.81□□□□□ -1.16
HERPUD1-206ENST00000563343 DCHS2Q6V1P9 2916 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 DRGXA6NNA5 263 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 TMEM110-MUSTN1A8MSY1 372 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 B4E171 279 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 E5RJQ4 531 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 ACTN4O43707 911 aaKnown RBP7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 CUTAO60888 179 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 PAGE1O75459 146 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 SORBS2O94875 1100 aaKnown RBP7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 THRAP10827 490 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 SLC2A3P11169 496 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 PDCP20941 246 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 BMP6P22004 513 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 F8A1P23610 371 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 CCR1P32246 355 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 TSPAN7P41732 249 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 YWHAEP62258 255 aaKnown RBP7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 YWHAZP63104 245 aaKnown RBP7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 ABHD18Q0P651 414 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 DPYDQ12882 1025 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 MRPL49Q13405 166 aaKnown RBP7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 ADAM9Q13443 819 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 TRA2AQ13595 282 aaKnown RBP eCLIP7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 ARHGEF7Q14155 803 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 STILQ15468 1287 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 EIF2S3LQ2VIR3 472 aaKnown RBP7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 ZNF805Q5CZA5 627 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 LRRC73Q5JTD7 316 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 ANKS6Q68DC2 871 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 SPECC1LQ69YQ0 1117 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 RD3Q7Z3Z2 195 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 TMEM110Q86TL2 294 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 SETD3Q86TU7 594 aaPredicted RBP7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 NLGN4XQ8N0W4 816 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 DEFB106AQ8N104 65 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 FAM46DQ8NEK8 389 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 NLGN4YQ8NFZ3 816 aaPredicted RBP7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 CCL4L1Q8NHW4 92 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 OR1E3Q8WZA6 343 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 KAT5Q92993 513 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 RTP4Q96DX8 246 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 SLC2A13Q96QE2 648 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 APOOQ9BUR5 198 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 TRIM62Q9BVG3 475 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 THAP9Q9H5L6 903 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 DDIT4Q9NX09 232 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 SLC39A1Q9NY26 324 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 SERTAD1Q9UHV2 236 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 ERRFI1Q9UJM3 462 aaPredicted RBP7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 MTMR6Q9Y217 621 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 COQ6Q9Y2Z9 468 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 FCF1Q9Y324 198 aaKnown RBP7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 TMEM184BQ9Y519 407 aaPredicted RBP7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 KCTD3Q9Y597 815 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 MRPS18BQ9Y676 258 aaKnown RBP7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 TACC2O95359 2948 aa7.8□□□□□ -1.16
HERPUD1-206ENST00000563343 IGLV3-10A0A075B6K4 115 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 TMEM202A6NGA9 273 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 TTLL8A6PVC2 850 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 B4DGG1 531 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 TCP11X1B4DZS4 312 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 MKRN2OSH3BPM6 223 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 NEMP1O14524 444 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 TNFP01375 233 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 TCN2P20062 427 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms