RNA–Protein interactions for RNA: ENST00000563297.5

CLK3-211, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-211ENST00000563297 J3KR12 359 aa15.9■□□□□ 0.14
CLK3-211ENST00000563297 FGF10O15520 208 aaPredicted RBP15.9■□□□□ 0.14
CLK3-211ENST00000563297 BUB1BO60566 1050 aaPredicted RBP15.9■□□□□ 0.14
CLK3-211ENST00000563297 PIGNO95427 931 aa15.9■□□□□ 0.14
CLK3-211ENST00000563297 FERP16591 822 aa15.9■□□□□ 0.14
CLK3-211ENST00000563297 NDST2P52849 883 aa15.9■□□□□ 0.14
CLK3-211ENST00000563297 ERVPABLB-1P60509 514 aa15.9■□□□□ 0.14
CLK3-211ENST00000563297 PPARDQ03181 441 aa15.9■□□□□ 0.14
CLK3-211ENST00000563297 ELP6Q0PNE2 266 aa15.9■□□□□ 0.14
CLK3-211ENST00000563297 NR0B2Q15466 257 aa15.9■□□□□ 0.14
CLK3-211ENST00000563297 UGP2Q16851 508 aa15.9■□□□□ 0.14
CLK3-211ENST00000563297 WSCD2Q2TBF2 565 aa15.9■□□□□ 0.14
CLK3-211ENST00000563297 PERM1Q5SV97 790 aa15.9■□□□□ 0.14
CLK3-211ENST00000563297 C6orf132Q5T0Z8 1188 aa15.9■□□□□ 0.14
CLK3-211ENST00000563297 MACC1Q6ZN28 852 aa15.9■□□□□ 0.14
CLK3-211ENST00000563297 GPR155Q7Z3F1 870 aa15.9■□□□□ 0.14
CLK3-211ENST00000563297 DNAAF5Q86Y56 855 aa15.9■□□□□ 0.14
CLK3-211ENST00000563297 SLC35F3Q8IY50 421 aa15.9■□□□□ 0.14
CLK3-211ENST00000563297 ZNF248Q8NDW4 579 aa15.9■□□□□ 0.14
CLK3-211ENST00000563297 TPCN2Q8NHX9 752 aa15.9■□□□□ 0.14
CLK3-211ENST00000563297 SLC39A7Q92504 469 aa15.9■□□□□ 0.14
CLK3-211ENST00000563297 GLMNQ92990 594 aa15.9■□□□□ 0.14
CLK3-211ENST00000563297 NAF1Q96HR8 494 aaKnown RBP15.9■□□□□ 0.14
CLK3-211ENST00000563297 VCPIP1Q96JH7 1222 aa15.9■□□□□ 0.14
CLK3-211ENST00000563297 LGMNQ99538 433 aa15.9■□□□□ 0.14
CLK3-211ENST00000563297 SYT11Q9BT88 431 aa15.9■□□□□ 0.14
CLK3-211ENST00000563297 LRRC61Q9BV99 259 aa15.9■□□□□ 0.14
CLK3-211ENST00000563297 SLC13A1Q9BZW2 595 aa15.9■□□□□ 0.14
CLK3-211ENST00000563297 PDFQ9HBH1 243 aa15.9■□□□□ 0.14
CLK3-211ENST00000563297 GPATCH2LQ9NWQ4 482 aa15.9■□□□□ 0.14
CLK3-211ENST00000563297 UBA2Q9UBT2 640 aaPredicted RBP15.9■□□□□ 0.14
CLK3-211ENST00000563297 UNC13CQ8NB66 2214 aa15.89■□□□□ 0.13
CLK3-211ENST00000563297 TSPAN11A1L157 253 aa15.89■□□□□ 0.13
CLK3-211ENST00000563297 TK2O00142 265 aa15.89■□□□□ 0.13
CLK3-211ENST00000563297 MUSKO15146 869 aa15.89■□□□□ 0.13
CLK3-211ENST00000563297 ATXN7O15265 892 aaPredicted RBP15.89■□□□□ 0.13
CLK3-211ENST00000563297 PRB1P04280 392 aa15.89■□□□□ 0.13
CLK3-211ENST00000563297 ANXA6P08133 673 aa15.89■□□□□ 0.13
CLK3-211ENST00000563297 CCDC172P0C7W6 258 aa15.89■□□□□ 0.13
CLK3-211ENST00000563297 TSHRP16473 764 aa15.89■□□□□ 0.13
CLK3-211ENST00000563297 TNFAIP3P21580 790 aa15.89■□□□□ 0.13
CLK3-211ENST00000563297 XPAP23025 273 aaPredicted RBP15.89■□□□□ 0.13
CLK3-211ENST00000563297 HTR7P34969 479 aa15.89■□□□□ 0.13
CLK3-211ENST00000563297 RPIAP49247 311 aa15.89■□□□□ 0.13
CLK3-211ENST00000563297 PEX5P50542 639 aa15.89■□□□□ 0.13
CLK3-211ENST00000563297 PCBP4P57723 403 aaKnown RBP15.89■□□□□ 0.13
CLK3-211ENST00000563297 TPI1P60174 286 aa15.89■□□□□ 0.13
CLK3-211ENST00000563297 MAMLD1Q13495 774 aa15.89■□□□□ 0.13
CLK3-211ENST00000563297 GRM3Q14832 879 aa15.89■□□□□ 0.13
CLK3-211ENST00000563297 LRRC14Q15048 493 aa15.89■□□□□ 0.13
CLK3-211ENST00000563297 IRF4Q15306 451 aa15.89■□□□□ 0.13
CLK3-211ENST00000563297 STX1AQ16623 288 aa15.89■□□□□ 0.13
CLK3-211ENST00000563297 CRTC1Q6UUV9 634 aa15.89■□□□□ 0.13
CLK3-211ENST00000563297 ARFGAP1Q8N6T3 406 aa15.89■□□□□ 0.13
CLK3-211ENST00000563297 ZNF641Q96N77 438 aaPredicted RBP15.89■□□□□ 0.13
CLK3-211ENST00000563297 NCAPGQ9BPX3 1015 aa15.89■□□□□ 0.13
CLK3-211ENST00000563297 SLC39A8Q9C0K1 460 aa15.89■□□□□ 0.13
CLK3-211ENST00000563297 PCDH12Q9NPG4 1184 aa15.89■□□□□ 0.13
CLK3-211ENST00000563297 ASCL3Q9NQ33 180 aa15.89■□□□□ 0.13
CLK3-211ENST00000563297 DONSONQ9NYP3 566 aa15.89■□□□□ 0.13
CLK3-211ENST00000563297 ENTPD2Q9Y5L3 495 aa15.89■□□□□ 0.13
CLK3-211ENST00000563297 TMEM110-MUSTN1A8MSY1 372 aa15.88■□□□□ 0.13
CLK3-211ENST00000563297 CASC3O15234 703 aaKnown RBP15.88■□□□□ 0.13
CLK3-211ENST00000563297 TEX33O43247 280 aa15.88■□□□□ 0.13
CLK3-211ENST00000563297 PRAMEF11O60813 436 aa15.88■□□□□ 0.13
CLK3-211ENST00000563297 CELA2BP08218 269 aaPredicted RBP15.88■□□□□ 0.13
CLK3-211ENST00000563297 ATP1A3P13637 1013 aa15.88■□□□□ 0.13
CLK3-211ENST00000563297 PAPOLAP51003 745 aaKnown RBP15.88■□□□□ 0.13
CLK3-211ENST00000563297 CA9Q16790 459 aa15.88■□□□□ 0.13
CLK3-211ENST00000563297 IGF2-ASQ6U949 168 aa15.88■□□□□ 0.13
CLK3-211ENST00000563297 ZSWIM9Q86XI8 627 aa15.88■□□□□ 0.13
CLK3-211ENST00000563297 CAMK1DQ8IU85 385 aa15.88■□□□□ 0.13
CLK3-211ENST00000563297 LSM14AQ8ND56 463 aaKnown RBP15.88■□□□□ 0.13
CLK3-211ENST00000563297 TSACCQ96A04 125 aaPredicted RBP15.88■□□□□ 0.13
CLK3-211ENST00000563297 GRAMD1AQ96CP6 724 aa15.88■□□□□ 0.13
CLK3-211ENST00000563297 ATXN7L3BQ96GX2 97 aa15.88■□□□□ 0.13
CLK3-211ENST00000563297 PRR11Q96HE9 360 aaPredicted RBP15.88■□□□□ 0.13
CLK3-211ENST00000563297 CELF6Q96J87 481 aaKnown RBP15.88■□□□□ 0.13
CLK3-211ENST00000563297 APOOQ9BUR5 198 aa15.88■□□□□ 0.13
CLK3-211ENST00000563297 PARVAQ9NVD7 372 aa15.88■□□□□ 0.13
CLK3-211ENST00000563297 PADI4Q9UM07 663 aa15.88■□□□□ 0.13
CLK3-211ENST00000563297 AP4E1Q9UPM8 1137 aa15.88■□□□□ 0.13
CLK3-211ENST00000563297 SATB2Q9UPW6 733 aa15.88■□□□□ 0.13
CLK3-211ENST00000563297 ANKRD36A6QL64 1941 aa15.88■□□□□ 0.13
CLK3-211ENST00000563297 TEX51A0A1B0GUA7 166 aa15.87■□□□□ 0.13
CLK3-211ENST00000563297 TMCO5BA8MYB1 307 aa15.87■□□□□ 0.13
CLK3-211ENST00000563297 TCEA3O75764 348 aa15.87■□□□□ 0.13
CLK3-211ENST00000563297 C6P13671 934 aa15.87■□□□□ 0.13
CLK3-211ENST00000563297 DESP17661 470 aa15.87■□□□□ 0.13
CLK3-211ENST00000563297 RGRP47804 291 aa15.87■□□□□ 0.13
CLK3-211ENST00000563297 CSNK1DP48730 415 aa15.87■□□□□ 0.13
CLK3-211ENST00000563297 LIG3P49916 1009 aa15.87■□□□□ 0.13
CLK3-211ENST00000563297 BLKP51451 505 aa15.87■□□□□ 0.13
CLK3-211ENST00000563297 HK3P52790 923 aa15.87■□□□□ 0.13
CLK3-211ENST00000563297 CXADRP78310 365 aa15.87■□□□□ 0.13
CLK3-211ENST00000563297 INPP5AQ14642 412 aa15.87■□□□□ 0.13
CLK3-211ENST00000563297 AGERQ15109 404 aa15.87■□□□□ 0.13
CLK3-211ENST00000563297 ALG11Q2TAA5 492 aa15.87■□□□□ 0.13
CLK3-211ENST00000563297 C3orf38Q5JPI3 329 aa15.87■□□□□ 0.13
CLK3-211ENST00000563297 ERMARDQ5T6L9 678 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms