RNA–Protein interactions for RNA: ENST00000563065.5

CCNDBP1-204, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-204ENST00000563065 RALGAPA1Q6GYQ0 2036 aa17.6■□□□□ 0.41
CCNDBP1-204ENST00000563065 PTPRZ1P23471 2315 aaPredicted RBP17.6■□□□□ 0.41
CCNDBP1-204ENST00000563065 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.6■□□□□ 0.41
CCNDBP1-204ENST00000563065 A0A1W2PQU0 124 aa17.6■□□□□ 0.41
CCNDBP1-204ENST00000563065 TSPAN11A1L157 253 aa17.6■□□□□ 0.41
CCNDBP1-204ENST00000563065 F5H423 210 aaPredicted RBP17.6■□□□□ 0.41
CCNDBP1-204ENST00000563065 WNT9AO14904 365 aa17.6■□□□□ 0.41
CCNDBP1-204ENST00000563065 AREL1O15033 823 aa17.6■□□□□ 0.41
CCNDBP1-204ENST00000563065 HTRA2O43464 458 aaPredicted RBP17.6■□□□□ 0.41
CCNDBP1-204ENST00000563065 ATP1A1P05023 1023 aaKnown RBP17.6■□□□□ 0.41
CCNDBP1-204ENST00000563065 PDHA1P08559 390 aa17.6■□□□□ 0.41
CCNDBP1-204ENST00000563065 RBP3P10745 1247 aa17.6■□□□□ 0.41
CCNDBP1-204ENST00000563065 CD68P34810 354 aaPredicted RBP17.6■□□□□ 0.41
CCNDBP1-204ENST00000563065 MAPK8P45983 427 aa17.6■□□□□ 0.41
CCNDBP1-204ENST00000563065 CCDC15Q0P6D6 951 aa17.6■□□□□ 0.41
CCNDBP1-204ENST00000563065 XRCC4Q13426 336 aa17.6■□□□□ 0.41
CCNDBP1-204ENST00000563065 SF3A2Q15428 464 aaKnown RBP17.6■□□□□ 0.41
CCNDBP1-204ENST00000563065 UGP2Q16851 508 aa17.6■□□□□ 0.41
CCNDBP1-204ENST00000563065 WDR45BQ5MNZ6 344 aa17.6■□□□□ 0.41
CCNDBP1-204ENST00000563065 CFAP58Q5T655 872 aa17.6■□□□□ 0.41
CCNDBP1-204ENST00000563065 ALG1LQ6GMV1 187 aa17.6■□□□□ 0.41
CCNDBP1-204ENST00000563065 SLC13A5Q86YT5 568 aaPredicted RBP17.6■□□□□ 0.41
CCNDBP1-204ENST00000563065 C1orf216Q8TAB5 229 aa17.6■□□□□ 0.41
CCNDBP1-204ENST00000563065 ATG4AQ8WYN0 398 aa17.6■□□□□ 0.41
CCNDBP1-204ENST00000563065 SMIM14Q96QK8 99 aa17.6■□□□□ 0.41
CCNDBP1-204ENST00000563065 PCED1AQ9H1Q7 454 aa17.6■□□□□ 0.41
CCNDBP1-204ENST00000563065 CARD9Q9H257 536 aa17.6■□□□□ 0.41
CCNDBP1-204ENST00000563065 KDM4CQ9H3R0 1056 aa17.6■□□□□ 0.41
CCNDBP1-204ENST00000563065 PREBQ9HCU5 417 aa17.6■□□□□ 0.41
CCNDBP1-204ENST00000563065 PCDH12Q9NPG4 1184 aa17.6■□□□□ 0.41
CCNDBP1-204ENST00000563065 AMACRQ9UHK6 382 aa17.6■□□□□ 0.41
CCNDBP1-204ENST00000563065 JRKLQ9Y4A0 524 aa17.6■□□□□ 0.41
CCNDBP1-204ENST00000563065 PCDHB9Q9Y5E1 797 aa17.6■□□□□ 0.41
CCNDBP1-204ENST00000563065 PCDHGA5Q9Y5G8 931 aa17.6■□□□□ 0.41
CCNDBP1-204ENST00000563065 RAI2Q9Y5P3 530 aa17.6■□□□□ 0.41
CCNDBP1-204ENST00000563065 FAM186AA6NE01 2351 aa17.6■□□□□ 0.41
CCNDBP1-204ENST00000563065 GOLGA6L9A6NEM1 432 aa17.59■□□□□ 0.41
CCNDBP1-204ENST00000563065 A8MX80 341 aa17.59■□□□□ 0.41
CCNDBP1-204ENST00000563065 HACD1B0YJ81 288 aa17.59■□□□□ 0.41
CCNDBP1-204ENST00000563065 PRLRP16471 622 aa17.59■□□□□ 0.41
CCNDBP1-204ENST00000563065 XPAP23025 273 aaPredicted RBP17.59■□□□□ 0.41
CCNDBP1-204ENST00000563065 CD86P42081 329 aa17.59■□□□□ 0.41
CCNDBP1-204ENST00000563065 CCR5P51681 352 aa17.59■□□□□ 0.41
CCNDBP1-204ENST00000563065 DARS2Q6PI48 645 aaKnown RBP17.59■□□□□ 0.41
CCNDBP1-204ENST00000563065 BRAT1Q6PJG6 821 aa17.59■□□□□ 0.41
CCNDBP1-204ENST00000563065 PRPF39Q86UA1 669 aaKnown RBP17.59■□□□□ 0.41
CCNDBP1-204ENST00000563065 ZNF567Q8N184 647 aa17.59■□□□□ 0.41
CCNDBP1-204ENST00000563065 ZCCHC9Q8N567 271 aaKnown RBP17.59■□□□□ 0.41
CCNDBP1-204ENST00000563065 PAF1Q8N7H5 531 aa17.59■□□□□ 0.41
CCNDBP1-204ENST00000563065 SPATA22Q8NHS9 363 aa17.59■□□□□ 0.41
CCNDBP1-204ENST00000563065 HCAR2Q8TDS4 363 aa17.59■□□□□ 0.41
CCNDBP1-204ENST00000563065 UBE2Q2Q8WVN8 375 aa17.59■□□□□ 0.41
CCNDBP1-204ENST00000563065 TEKT5Q96M29 485 aa17.59■□□□□ 0.41
CCNDBP1-204ENST00000563065 RBM15Q96T37 977 aaKnown RBP eCLIP17.59■□□□□ 0.411e-7■■■■□ 19.6
CCNDBP1-204ENST00000563065 SEMA4GQ9NTN9 838 aa17.59■□□□□ 0.41
CCNDBP1-204ENST00000563065 DNAH14Q0VDD8 3507 aa17.58■□□□□ 0.41
CCNDBP1-204ENST00000563065 CFAP54Q96N23 3096 aa17.58■□□□□ 0.41
CCNDBP1-204ENST00000563065 A0A0U1RQS6 177 aa17.58■□□□□ 0.41
CCNDBP1-204ENST00000563065 A0A1W2PPC4 97 aa17.58■□□□□ 0.41
CCNDBP1-204ENST00000563065 IGLON5A6NGN9 336 aa17.58■□□□□ 0.41
CCNDBP1-204ENST00000563065 UPK3BL1B0FP48 263 aa17.58■□□□□ 0.41
CCNDBP1-204ENST00000563065 UPK3BL2E5RIL1 263 aa17.58■□□□□ 0.41
CCNDBP1-204ENST00000563065 NEMP1O14524 444 aa17.58■□□□□ 0.41
CCNDBP1-204ENST00000563065 LATO43561 262 aa17.58■□□□□ 0.41
CCNDBP1-204ENST00000563065 AP1G1O43747 822 aa17.58■□□□□ 0.41
CCNDBP1-204ENST00000563065 KIF5CO60282 957 aa17.58■□□□□ 0.41
CCNDBP1-204ENST00000563065 CEP104O60308 925 aa17.58■□□□□ 0.41
CCNDBP1-204ENST00000563065 MMP20O60882 483 aa17.58■□□□□ 0.41
CCNDBP1-204ENST00000563065 CD27P26842 260 aa17.58■□□□□ 0.41
CCNDBP1-204ENST00000563065 FAM193AP78312 1265 aa17.58■□□□□ 0.41
CCNDBP1-204ENST00000563065 SKOR1P84550 965 aa17.58■□□□□ 0.41
CCNDBP1-204ENST00000563065 FGL2Q14314 439 aa17.58■□□□□ 0.41
CCNDBP1-204ENST00000563065 ZNF284Q2VY69 593 aa17.58■□□□□ 0.41
CCNDBP1-204ENST00000563065 RALGPS1Q5JS13 557 aa17.58■□□□□ 0.41
CCNDBP1-204ENST00000563065 LAYNQ6UX15 382 aa17.58■□□□□ 0.41
CCNDBP1-204ENST00000563065 TRIM69Q86WT6 500 aa17.58■□□□□ 0.41
CCNDBP1-204ENST00000563065 HORMAD1Q86X24 394 aa17.58■□□□□ 0.41
CCNDBP1-204ENST00000563065 C1orf54Q8WWF1 131 aa17.58■□□□□ 0.41
CCNDBP1-204ENST00000563065 RAB7BQ96AH8 199 aa17.58■□□□□ 0.41
CCNDBP1-204ENST00000563065 WRAP53Q9BUR4 548 aaKnown RBP17.58■□□□□ 0.41
CCNDBP1-204ENST00000563065 USP29Q9HBJ7 922 aa17.58■□□□□ 0.41
CCNDBP1-204ENST00000563065 GLOD4Q9HC38 313 aa17.58■□□□□ 0.41
CCNDBP1-204ENST00000563065 RXFP3Q9NSD7 469 aa17.58■□□□□ 0.41
CCNDBP1-204ENST00000563065 UBP1Q9NZI7 540 aa17.58■□□□□ 0.41
CCNDBP1-204ENST00000563065 DNPEPQ9ULA0 475 aa17.58■□□□□ 0.41
CCNDBP1-204ENST00000563065 CHKBQ9Y259 395 aa17.58■□□□□ 0.41
CCNDBP1-204ENST00000563065 CA5BQ9Y2D0 317 aa17.58■□□□□ 0.41
CCNDBP1-204ENST00000563065 ZNF292O60281 2723 aa17.58■□□□□ 0.4
CCNDBP1-204ENST00000563065 PI4KAP42356 2102 aa17.58■□□□□ 0.4
CCNDBP1-204ENST00000563065 RIOK3O14730 519 aaKnown RBP17.57■□□□□ 0.4
CCNDBP1-204ENST00000563065 SLC31A1O15431 190 aa17.57■□□□□ 0.4
CCNDBP1-204ENST00000563065 KCNN4O15554 427 aa17.57■□□□□ 0.4
CCNDBP1-204ENST00000563065 SOCS5O75159 536 aa17.57■□□□□ 0.4
CCNDBP1-204ENST00000563065 PGLSO95336 258 aa17.57■□□□□ 0.4
CCNDBP1-204ENST00000563065 MT-CYBP00156 380 aaPredicted RBP17.57■□□□□ 0.4
CCNDBP1-204ENST00000563065 PRLP01236 227 aa17.57■□□□□ 0.4
CCNDBP1-204ENST00000563065 SERPINF2P08697 491 aa17.57■□□□□ 0.4
CCNDBP1-204ENST00000563065 IRX4P78413 519 aa17.57■□□□□ 0.4
CCNDBP1-204ENST00000563065 SIX1Q15475 284 aaPredicted RBP17.57■□□□□ 0.4
CCNDBP1-204ENST00000563065 TMEM259Q4ZIN3 620 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms