RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 NAP1L1P55209 391 aaKnown RBP16.28■□□□□ 0.2
COMMD4-206ENST00000562610 CLDN2P57739 230 aa16.28■□□□□ 0.2
COMMD4-206ENST00000562610 DYNLT1P63172 113 aa16.28■□□□□ 0.2
COMMD4-206ENST00000562610 NSUN2Q08J23 767 aaKnown RBP eCLIP16.28■□□□□ 0.2
COMMD4-206ENST00000562610 FGL2Q14314 439 aa16.28■□□□□ 0.2
COMMD4-206ENST00000562610 IFI16Q16666 785 aaKnown RBP16.28■□□□□ 0.2
COMMD4-206ENST00000562610 UGP2Q16851 508 aa16.28■□□□□ 0.2
COMMD4-206ENST00000562610 PRAMEF14Q5SWL7 426 aa16.28■□□□□ 0.2
COMMD4-206ENST00000562610 C11orf63Q6NUN7 778 aa16.28■□□□□ 0.2
COMMD4-206ENST00000562610 ERAP2Q6P179 960 aa16.28■□□□□ 0.2
COMMD4-206ENST00000562610 GCNT7Q6ZNI0 430 aa16.28■□□□□ 0.2
COMMD4-206ENST00000562610 PIP4P1Q86T03 277 aa16.28■□□□□ 0.2
COMMD4-206ENST00000562610 DAAM2Q86T65 1068 aa16.28■□□□□ 0.2
COMMD4-206ENST00000562610 KIAA1328Q86T90 577 aa16.28■□□□□ 0.2
COMMD4-206ENST00000562610 ZSWIM9Q86XI8 627 aa16.28■□□□□ 0.2
COMMD4-206ENST00000562610 LRRC49Q8IUZ0 686 aa16.28■□□□□ 0.2
COMMD4-206ENST00000562610 PGBD5Q8N414 524 aa16.28■□□□□ 0.2
COMMD4-206ENST00000562610 TMEM145Q8NBT3 493 aa16.28■□□□□ 0.2
COMMD4-206ENST00000562610 PDCD6IPQ8WUM4 868 aaKnown RBP16.28■□□□□ 0.2
COMMD4-206ENST00000562610 LRRN4Q8WUT4 740 aa16.28■□□□□ 0.2
COMMD4-206ENST00000562610 KLHDC7BQ96G42 594 aa16.28■□□□□ 0.2
COMMD4-206ENST00000562610 CAMK1GQ96NX5 476 aa16.28■□□□□ 0.2
COMMD4-206ENST00000562610 ELF4Q99607 663 aaPredicted RBP16.28■□□□□ 0.2
COMMD4-206ENST00000562610 MGME1Q9BQP7 344 aa16.28■□□□□ 0.2
COMMD4-206ENST00000562610 PCDH12Q9NPG4 1184 aa16.28■□□□□ 0.2
COMMD4-206ENST00000562610 HEY1Q9Y5J3 304 aa16.28■□□□□ 0.2
COMMD4-206ENST00000562610 ALG6Q9Y672 507 aa16.28■□□□□ 0.2
COMMD4-206ENST00000562610 COL5A1P20908 1838 aaPredicted RBP16.27■□□□□ 0.2
COMMD4-206ENST00000562610 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.27■□□□□ 0.2
COMMD4-206ENST00000562610 RCCD1A6NED2 376 aa16.27■□□□□ 0.2
COMMD4-206ENST00000562610 C3orf70A6NLC5 250 aaPredicted RBP16.27■□□□□ 0.2
COMMD4-206ENST00000562610 A6NNZ2 444 aa16.27■□□□□ 0.2
COMMD4-206ENST00000562610 ZNF487B1APH4 448 aa16.27■□□□□ 0.2
COMMD4-206ENST00000562610 FLRT2O43155 660 aa16.27■□□□□ 0.2
COMMD4-206ENST00000562610 DFNA5O60443 496 aa16.27■□□□□ 0.2
COMMD4-206ENST00000562610 MMP20O60882 483 aa16.27■□□□□ 0.2
COMMD4-206ENST00000562610 MX2P20592 715 aa16.27■□□□□ 0.2
COMMD4-206ENST00000562610 ARRB1P49407 418 aaPredicted RBP16.27■□□□□ 0.2
COMMD4-206ENST00000562610 SUOXP51687 545 aa16.27■□□□□ 0.2
COMMD4-206ENST00000562610 VAV2P52735 878 aa16.27■□□□□ 0.2
COMMD4-206ENST00000562610 ITKQ08881 620 aa16.27■□□□□ 0.2
COMMD4-206ENST00000562610 OVGP1Q12889 678 aa16.27■□□□□ 0.2
COMMD4-206ENST00000562610 SUZ12Q15022 739 aaKnown RBP16.27■□□□□ 0.2
COMMD4-206ENST00000562610 VSIG1Q86XK7 387 aa16.27■□□□□ 0.2
COMMD4-206ENST00000562610 SPATS2Q86XZ4 545 aaKnown RBP16.27■□□□□ 0.2
COMMD4-206ENST00000562610 TMEM139Q8IV31 216 aa16.27■□□□□ 0.2
COMMD4-206ENST00000562610 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.27■□□□□ 0.2
COMMD4-206ENST00000562610 PLD5Q8N7P1 536 aa16.27■□□□□ 0.2
COMMD4-206ENST00000562610 CCNYQ8ND76 341 aa16.27■□□□□ 0.2
COMMD4-206ENST00000562610 OR13H1Q8NG92 308 aa16.27■□□□□ 0.2
COMMD4-206ENST00000562610 HCAR2Q8TDS4 363 aa16.27■□□□□ 0.2
COMMD4-206ENST00000562610 NUDCD1Q96RS6 583 aa16.27■□□□□ 0.2
COMMD4-206ENST00000562610 HAUS2Q9NVX0 235 aa16.27■□□□□ 0.2
COMMD4-206ENST00000562610 DTLQ9NZJ0 730 aa16.27■□□□□ 0.2
COMMD4-206ENST00000562610 ATP8A1Q9Y2Q0 1164 aa16.27■□□□□ 0.2
COMMD4-206ENST00000562610 REXO2Q9Y3B8 237 aaKnown RBP16.27■□□□□ 0.2
COMMD4-206ENST00000562610 PCDHB9Q9Y5E1 797 aa16.27■□□□□ 0.2
COMMD4-206ENST00000562610 PCDHGB2Q9Y5G2 931 aa16.27■□□□□ 0.2
COMMD4-206ENST00000562610 A0A1B0GTQ1 180 aa16.26■□□□□ 0.19
COMMD4-206ENST00000562610 SPAARA0A1B0GVQ0 90 aa16.26■□□□□ 0.19
COMMD4-206ENST00000562610 RAD51BO15315 384 aa16.26■□□□□ 0.19
COMMD4-206ENST00000562610 SOCS5O75159 536 aa16.26■□□□□ 0.19
COMMD4-206ENST00000562610 TM7SF2O76062 418 aa16.26■□□□□ 0.19
COMMD4-206ENST00000562610 ADRB1P08588 477 aa16.26■□□□□ 0.19
COMMD4-206ENST00000562610 MMP12P39900 470 aa16.26■□□□□ 0.19
COMMD4-206ENST00000562610 MARCKSL1P49006 195 aa16.26■□□□□ 0.19
COMMD4-206ENST00000562610 FAM193AP78312 1265 aa16.26■□□□□ 0.19
COMMD4-206ENST00000562610 SEMG2Q02383 582 aa16.26■□□□□ 0.19
COMMD4-206ENST00000562610 SLC10A2Q12908 348 aaPredicted RBP16.26■□□□□ 0.19
COMMD4-206ENST00000562610 N4BP2L1Q5TBK1 243 aaPredicted RBP16.26■□□□□ 0.19
COMMD4-206ENST00000562610 SLC9A4Q6AI14 798 aa16.26■□□□□ 0.19
COMMD4-206ENST00000562610 MFSD7Q6UXD7 560 aa16.26■□□□□ 0.19
COMMD4-206ENST00000562610 CCDC50Q8IVM0 306 aa16.26■□□□□ 0.19
COMMD4-206ENST00000562610 OXR1Q8N573 874 aa16.26■□□□□ 0.19
COMMD4-206ENST00000562610 TPCN2Q8NHX9 752 aa16.26■□□□□ 0.19
COMMD4-206ENST00000562610 HDAC11Q96DB2 347 aa16.26■□□□□ 0.19
COMMD4-206ENST00000562610 DESI2Q9BSY9 194 aa16.26■□□□□ 0.19
COMMD4-206ENST00000562610 C1QTNF7Q9BXJ2 289 aa16.26■□□□□ 0.19
COMMD4-206ENST00000562610 C1QTNF2Q9BXJ5 285 aa16.26■□□□□ 0.19
COMMD4-206ENST00000562610 POLR1EQ9GZS1 481 aaKnown RBP16.26■□□□□ 0.19
COMMD4-206ENST00000562610 NOD2Q9HC29 1040 aa16.26■□□□□ 0.19
COMMD4-206ENST00000562610 SALL4Q9UJQ4 1053 aa16.26■□□□□ 0.19
COMMD4-206ENST00000562610 COQ6Q9Y2Z9 468 aa16.26■□□□□ 0.19
COMMD4-206ENST00000562610 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.26■□□□□ 0.19
COMMD4-206ENST00000562610 PCDHGC4Q9Y5F7 938 aa16.26■□□□□ 0.19
COMMD4-206ENST00000562610 RIOK3O14730 519 aaKnown RBP16.25■□□□□ 0.19
COMMD4-206ENST00000562610 FPGTO14772 594 aa16.25■□□□□ 0.19
COMMD4-206ENST00000562610 MATN3O15232 486 aa16.25■□□□□ 0.19
COMMD4-206ENST00000562610 YKT6O15498 198 aa16.25■□□□□ 0.19
COMMD4-206ENST00000562610 CPP00450 1065 aa16.25■□□□□ 0.19
COMMD4-206ENST00000562610 ZFXP17010 805 aaPredicted RBP16.25■□□□□ 0.19
COMMD4-206ENST00000562610 CR2P20023 1033 aa16.25■□□□□ 0.19
COMMD4-206ENST00000562610 CCNCP24863 283 aa16.25■□□□□ 0.19
COMMD4-206ENST00000562610 GRK6P43250 576 aa16.25■□□□□ 0.19
COMMD4-206ENST00000562610 POLR2LP62875 67 aaKnown RBP16.25■□□□□ 0.19
COMMD4-206ENST00000562610 SIM1P81133 766 aaPredicted RBP16.25■□□□□ 0.19
COMMD4-206ENST00000562610 HNRNPDQ14103 355 aaKnown RBP16.25■□□□□ 0.19
COMMD4-206ENST00000562610 LLGL1Q15334 1064 aa16.25■□□□□ 0.19
COMMD4-206ENST00000562610 INAVAQ3KP66 663 aa16.25■□□□□ 0.19
COMMD4-206ENST00000562610 TMEM52BQ4KMG9 183 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms