RNA–Protein interactions for RNA: ENST00000562474.1

TSC2-218, Transcript of TSC complex subunit 2, humanhuman

TSL 5

Gene TSC2, Length 589 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-218ENST00000562474 TEX26Q8N6G2 289 aa11.32□□□□□ -0.6
TSC2-218ENST00000562474 ATG4AQ8WYN0 398 aa11.32□□□□□ -0.6
TSC2-218ENST00000562474 FOXJ1Q92949 421 aa11.32□□□□□ -0.6
TSC2-218ENST00000562474 FAM131CQ96AQ9 280 aa11.32□□□□□ -0.6
TSC2-218ENST00000562474 LOXL4Q96JB6 756 aa11.32□□□□□ -0.6
TSC2-218ENST00000562474 TSGA13Q96PP4 275 aa11.32□□□□□ -0.6
TSC2-218ENST00000562474 NUDCD1Q96RS6 583 aa11.32□□□□□ -0.6
TSC2-218ENST00000562474 GTPBP2Q9BX10 602 aaKnown RBP11.32□□□□□ -0.6
TSC2-218ENST00000562474 HDAC8Q9BY41 377 aa11.32□□□□□ -0.6
TSC2-218ENST00000562474 ATP13A3Q9H7F0 1226 aa11.32□□□□□ -0.6
TSC2-218ENST00000562474 TM9SF3Q9HD45 589 aa11.32□□□□□ -0.6
TSC2-218ENST00000562474 PCDH12Q9NPG4 1184 aa11.32□□□□□ -0.6
TSC2-218ENST00000562474 AASDHPPTQ9NRN7 309 aa11.32□□□□□ -0.6
TSC2-218ENST00000562474 SMARCAL1Q9NZC9 954 aa11.32□□□□□ -0.6
TSC2-218ENST00000562474 UBP1Q9NZI7 540 aa11.32□□□□□ -0.6
TSC2-218ENST00000562474 GOLGA4Q13439 2230 aaKnown RBP11.32□□□□□ -0.6
TSC2-218ENST00000562474 ARID1BQ8NFD5 2236 aaPredicted RBP11.31□□□□□ -0.6
TSC2-218ENST00000562474 CNOT1A5YKK6 2376 aaKnown RBP11.31□□□□□ -0.6
TSC2-218ENST00000562474 CXorf51AA0A1B0GTR3 108 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.31□□□□□ -0.6
TSC2-218ENST00000562474 LNP1A1A4G5 178 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 IGLON5A6NGN9 336 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 MIF4GDA9UHW6 222 aaKnown RBP11.31□□□□□ -0.6
TSC2-218ENST00000562474 UPK3BL1B0FP48 263 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 UPK3BL2E5RIL1 263 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 RAD51BO15315 384 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 SLC7A4O43246 635 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 MMP2P08253 660 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 ALPIP09923 528 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 PTPN3P26045 913 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 RBL1P28749 1068 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 HOXD11P31277 338 aaPredicted RBP11.31□□□□□ -0.6
TSC2-218ENST00000562474 CD86P42081 329 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 RENBPP51606 427 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 EIF3EP60228 445 aaKnown RBP11.31□□□□□ -0.6
TSC2-218ENST00000562474 AP1S1P61966 158 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 FAM193AP78312 1265 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 BNC1Q01954 994 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 SFSWAPQ12872 951 aaKnown RBP11.31□□□□□ -0.6
TSC2-218ENST00000562474 HNRNPDQ14103 355 aaKnown RBP11.31□□□□□ -0.6
TSC2-218ENST00000562474 NOMO1Q15155 1222 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 RPS6KA1Q15418 735 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 CSRP2Q16527 193 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 PCSK7Q16549 785 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 WDR45BQ5MNZ6 344 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 SYCP2LQ5T4T6 812 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 SEL1L2Q5TEA6 688 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 DENND2CQ68D51 928 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 HORMAD1Q86X24 394 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 C12orf50Q8NA57 414 aaPredicted RBP11.31□□□□□ -0.6
TSC2-218ENST00000562474 CADM4Q8NFZ8 388 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 SPATA22Q8NHS9 363 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 ARRDC2Q8TBH0 407 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 TFB1MQ8WVM0 346 aaKnown RBP11.31□□□□□ -0.6
TSC2-218ENST00000562474 SERAC1Q96JX3 654 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 QKIQ96PU8 341 aaKnown RBP eCLIP11.31□□□□□ -0.6
TSC2-218ENST00000562474 ALS2CR12Q96Q35 445 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 RBM15Q96T37 977 aaKnown RBP eCLIP11.31□□□□□ -0.6
TSC2-218ENST00000562474 IL12RB2Q99665 862 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 EDEM2Q9BV94 578 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 TLR10Q9BXR5 811 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 OSBPL1AQ9BXW6 950 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 CPEB1Q9BZB8 566 aaKnown RBP11.31□□□□□ -0.6
TSC2-218ENST00000562474 POLR1EQ9GZS1 481 aaKnown RBP11.31□□□□□ -0.6
TSC2-218ENST00000562474 VPS45Q9NRW7 570 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 CHKBQ9Y259 395 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 PCDHB9Q9Y5E1 797 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 PCDHGA5Q9Y5G8 931 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 RAI2Q9Y5P3 530 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.31□□□□□ -0.6
TSC2-218ENST00000562474 PLXNB3Q9ULL4 1909 aa11.31□□□□□ -0.6
TSC2-218ENST00000562474 PCNX2A6NKB5 2137 aa11.3□□□□□ -0.6
TSC2-218ENST00000562474 A0A1W2PPC4 97 aa11.3□□□□□ -0.6
TSC2-218ENST00000562474 APOC4-APOC2K7ER74 178 aa11.3□□□□□ -0.6
TSC2-218ENST00000562474 TRAFD1O14545 582 aaPredicted RBP11.3□□□□□ -0.6
TSC2-218ENST00000562474 AREL1O15033 823 aa11.3□□□□□ -0.6
TSC2-218ENST00000562474 KHNYNO15037 678 aaKnown RBP11.3□□□□□ -0.6
TSC2-218ENST00000562474 BCAT2O15382 392 aaPredicted RBP11.3□□□□□ -0.6
TSC2-218ENST00000562474 MT-CYBP00156 380 aaPredicted RBP11.3□□□□□ -0.6
TSC2-218ENST00000562474 CPP00450 1065 aa11.3□□□□□ -0.6
TSC2-218ENST00000562474 APOC2P02655 101 aa11.3□□□□□ -0.6
TSC2-218ENST00000562474 ZNF806P0C7X5 589 aa11.3□□□□□ -0.6
TSC2-218ENST00000562474 RBP3P10745 1247 aa11.3□□□□□ -0.6
TSC2-218ENST00000562474 ENGP17813 658 aa11.3□□□□□ -0.6
TSC2-218ENST00000562474 NFKB1P19838 968 aa11.3□□□□□ -0.6
TSC2-218ENST00000562474 CD27P26842 260 aa11.3□□□□□ -0.6
TSC2-218ENST00000562474 CSNK1DP48730 415 aa11.3□□□□□ -0.6
TSC2-218ENST00000562474 COPS2P61201 443 aa11.3□□□□□ -0.6
TSC2-218ENST00000562474 IFI35P80217 286 aaPredicted RBP11.3□□□□□ -0.6
TSC2-218ENST00000562474 IL9RQ01113 521 aa11.3□□□□□ -0.6
TSC2-218ENST00000562474 CCDC173Q0VFZ6 552 aa11.3□□□□□ -0.6
TSC2-218ENST00000562474 WASHC5Q12768 1159 aa11.3□□□□□ -0.6
TSC2-218ENST00000562474 RALGDSQ12967 914 aa11.3□□□□□ -0.6
TSC2-218ENST00000562474 OLIG2Q13516 323 aa11.3□□□□□ -0.6
TSC2-218ENST00000562474 GALNT3Q14435 633 aa11.3□□□□□ -0.6
TSC2-218ENST00000562474 UGP2Q16851 508 aa11.3□□□□□ -0.6
TSC2-218ENST00000562474 ZNF284Q2VY69 593 aa11.3□□□□□ -0.6
TSC2-218ENST00000562474 UAP1L1Q3KQV9 507 aa11.3□□□□□ -0.6
TSC2-218ENST00000562474 ZNF569Q5MCW4 686 aa11.3□□□□□ -0.6
TSC2-218ENST00000562474 NYAP1Q6ZVC0 841 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms