RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 UGP2Q16851 508 aa13.54□□□□□ -0.24
CDH1-204ENST00000562118 POM121L1PQ3SYA9 428 aa13.54□□□□□ -0.24
CDH1-204ENST00000562118 TMEM52BQ4KMG9 183 aa13.54□□□□□ -0.24
CDH1-204ENST00000562118 KIAA1161Q6NSJ0 714 aa13.54□□□□□ -0.24
CDH1-204ENST00000562118 PRR23BQ6ZRT6 265 aa13.54□□□□□ -0.24
CDH1-204ENST00000562118 PRPF39Q86UA1 669 aaKnown RBP13.54□□□□□ -0.24
CDH1-204ENST00000562118 FAM124AQ86V42 546 aa13.54□□□□□ -0.24
CDH1-204ENST00000562118 ZC3H18Q86VM9 953 aaKnown RBP13.54□□□□□ -0.24
CDH1-204ENST00000562118 SYT12Q8IV01 421 aa13.54□□□□□ -0.24
CDH1-204ENST00000562118 CDKL3Q8IVW4 592 aaPredicted RBP13.54□□□□□ -0.24
CDH1-204ENST00000562118 CBARPQ8N350 705 aaPredicted RBP13.54□□□□□ -0.24
CDH1-204ENST00000562118 OR14C36Q8NHC7 312 aa13.54□□□□□ -0.24
CDH1-204ENST00000562118 PIH1D2Q8WWB5 315 aa13.54□□□□□ -0.24
CDH1-204ENST00000562118 RUBCNQ92622 972 aa13.54□□□□□ -0.24
CDH1-204ENST00000562118 HAUS1Q96CS2 278 aa13.54□□□□□ -0.24
CDH1-204ENST00000562118 HSPA12BQ96MM6 686 aa13.54□□□□□ -0.24
CDH1-204ENST00000562118 TRIB3Q96RU7 358 aa13.54□□□□□ -0.24
CDH1-204ENST00000562118 GORASP1Q9BQQ3 440 aa13.54□□□□□ -0.24
CDH1-204ENST00000562118 SLC25A51Q9H1U9 297 aa13.54□□□□□ -0.24
CDH1-204ENST00000562118 SCUBE2Q9NQ36 999 aa13.54□□□□□ -0.24
CDH1-204ENST00000562118 DYRK4Q9NR20 520 aa13.54□□□□□ -0.24
CDH1-204ENST00000562118 TRHDEQ9UKU6 1024 aa13.54□□□□□ -0.24
CDH1-204ENST00000562118 RAB23Q9ULC3 237 aa13.54□□□□□ -0.24
CDH1-204ENST00000562118 ZFR2Q9UPR6 939 aaKnown RBP13.54□□□□□ -0.24
CDH1-204ENST00000562118 ZNF106Q9H2Y7 1883 aaKnown RBP13.53□□□□□ -0.24
CDH1-204ENST00000562118 A0A1W2PPC4 97 aa13.53□□□□□ -0.24
CDH1-204ENST00000562118 TTC24A2A3L6 582 aaPredicted RBP13.53□□□□□ -0.24
CDH1-204ENST00000562118 C5orf60A6NFR6 353 aa13.53□□□□□ -0.24
CDH1-204ENST00000562118 RIOK3O14730 519 aaKnown RBP13.53□□□□□ -0.24
CDH1-204ENST00000562118 TSPAN6O43657 245 aa13.53□□□□□ -0.24
CDH1-204ENST00000562118 LIASO43766 372 aa13.53□□□□□ -0.24
CDH1-204ENST00000562118 ATP1A1P05023 1023 aaKnown RBP13.53□□□□□ -0.24
CDH1-204ENST00000562118 PRLRP16471 622 aa13.53□□□□□ -0.24
CDH1-204ENST00000562118 ITPKAP23677 461 aa13.53□□□□□ -0.24
CDH1-204ENST00000562118 MSNP26038 577 aaKnown RBP13.53□□□□□ -0.24
CDH1-204ENST00000562118 CD27P26842 260 aa13.53□□□□□ -0.24
CDH1-204ENST00000562118 RBL1P28749 1068 aa13.53□□□□□ -0.24
CDH1-204ENST00000562118 MPLP40238 635 aa13.53□□□□□ -0.24
CDH1-204ENST00000562118 EIF3EP60228 445 aaKnown RBP13.53□□□□□ -0.24
CDH1-204ENST00000562118 RPL26P61254 145 aaKnown RBP13.53□□□□□ -0.24
CDH1-204ENST00000562118 RALGDSQ12967 914 aa13.53□□□□□ -0.24
CDH1-204ENST00000562118 ZNF284Q2VY69 593 aa13.53□□□□□ -0.24
CDH1-204ENST00000562118 ZNF569Q5MCW4 686 aa13.53□□□□□ -0.24
CDH1-204ENST00000562118 PAPD7Q5XG87 772 aaKnown RBP13.53□□□□□ -0.24
CDH1-204ENST00000562118 HORMAD1Q86X24 394 aa13.53□□□□□ -0.24
CDH1-204ENST00000562118 ZNF567Q8N184 647 aa13.53□□□□□ -0.24
CDH1-204ENST00000562118 RYBPQ8N488 228 aaPredicted RBP13.53□□□□□ -0.24
CDH1-204ENST00000562118 TMEM145Q8NBT3 493 aa13.53□□□□□ -0.24
CDH1-204ENST00000562118 PBKQ96KB5 322 aa13.53□□□□□ -0.24
CDH1-204ENST00000562118 FCRL5Q96RD9 977 aa13.53□□□□□ -0.24
CDH1-204ENST00000562118 LYSMD1Q96S90 227 aa13.53□□□□□ -0.24
CDH1-204ENST00000562118 C1QTNF2Q9BXJ5 285 aa13.53□□□□□ -0.24
CDH1-204ENST00000562118 GLOD4Q9HC38 313 aa13.53□□□□□ -0.24
CDH1-204ENST00000562118 CAPN10Q9HC96 672 aa13.53□□□□□ -0.24
CDH1-204ENST00000562118 TMEM74BQ9NUR3 256 aa13.53□□□□□ -0.24
CDH1-204ENST00000562118 SNX12Q9UMY4 172 aa13.53□□□□□ -0.24
CDH1-204ENST00000562118 RPL26L1Q9UNX3 145 aaKnown RBP13.53□□□□□ -0.24
CDH1-204ENST00000562118 SLCO1B1Q9Y6L6 691 aa13.53□□□□□ -0.24
CDH1-204ENST00000562118 ENC1O14682 589 aa13.52□□□□□ -0.25
CDH1-204ENST00000562118 MAP3K13O43283 966 aa13.52□□□□□ -0.25
CDH1-204ENST00000562118 SERPINF2P08697 491 aa13.52□□□□□ -0.25
CDH1-204ENST00000562118 ZNF806P0C7X5 589 aa13.52□□□□□ -0.25
CDH1-204ENST00000562118 ELP6Q0PNE2 266 aa13.52□□□□□ -0.25
CDH1-204ENST00000562118 FGL2Q14314 439 aa13.52□□□□□ -0.25
CDH1-204ENST00000562118 WDR45BQ5MNZ6 344 aa13.52□□□□□ -0.25
CDH1-204ENST00000562118 FBXL19Q6PCT2 694 aa13.52□□□□□ -0.25
CDH1-204ENST00000562118 SLC23A3Q6PIS1 610 aa13.52□□□□□ -0.25
CDH1-204ENST00000562118 KDELC1Q6UW63 502 aa13.52□□□□□ -0.25
CDH1-204ENST00000562118 B4GALNT4Q76KP1 1039 aa13.52□□□□□ -0.25
CDH1-204ENST00000562118 DPPA4Q7L190 304 aa13.52□□□□□ -0.25
CDH1-204ENST00000562118 CYP2U1Q7Z449 544 aa13.52□□□□□ -0.25
CDH1-204ENST00000562118 RABEPKQ7Z6M1 372 aa13.52□□□□□ -0.25
CDH1-204ENST00000562118 RAVER1Q8IY67 606 aaKnown RBP13.52□□□□□ -0.25
CDH1-204ENST00000562118 SPATA13Q96N96 652 aa13.52□□□□□ -0.25
CDH1-204ENST00000562118 LENG8Q96PV6 779 aaPredicted RBP13.52□□□□□ -0.25
CDH1-204ENST00000562118 WDR24Q96S15 920 aa13.52□□□□□ -0.25
CDH1-204ENST00000562118 OSBPL9Q96SU4 736 aa13.52□□□□□ -0.25
CDH1-204ENST00000562118 GBA3Q9H227 469 aa13.52□□□□□ -0.25
CDH1-204ENST00000562118 PARD6AQ9NPB6 346 aa13.52□□□□□ -0.25
CDH1-204ENST00000562118 PCDH12Q9NPG4 1184 aa13.52□□□□□ -0.25
CDH1-204ENST00000562118 VPS45Q9NRW7 570 aa13.52□□□□□ -0.25
CDH1-204ENST00000562118 GPR27Q9NS67 375 aa13.52□□□□□ -0.25
CDH1-204ENST00000562118 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.52□□□□□ -0.25
CDH1-204ENST00000562118 GGT7Q9UJ14 662 aa13.52□□□□□ -0.25
CDH1-204ENST00000562118 DNPEPQ9ULA0 475 aa13.52□□□□□ -0.25
CDH1-204ENST00000562118 DMTF1Q9Y222 760 aa13.52□□□□□ -0.25
CDH1-204ENST00000562118 PCDHGC4Q9Y5F7 938 aa13.52□□□□□ -0.25
CDH1-204ENST00000562118 RAI2Q9Y5P3 530 aa13.52□□□□□ -0.25
CDH1-204ENST00000562118 TMEM131Q92545 1883 aa13.51□□□□□ -0.25
CDH1-204ENST00000562118 A0A1W2PR77 199 aa13.51□□□□□ -0.25
CDH1-204ENST00000562118 OPHN1O60890 802 aa13.51□□□□□ -0.25
CDH1-204ENST00000562118 RNGTTO60942 597 aaKnown RBP13.51□□□□□ -0.25
CDH1-204ENST00000562118 EPOP01588 193 aa13.51□□□□□ -0.25
CDH1-204ENST00000562118 ITGAVP06756 1048 aa13.51□□□□□ -0.25
CDH1-204ENST00000562118 PDHA1P08559 390 aa13.51□□□□□ -0.25
CDH1-204ENST00000562118 GM2AP17900 193 aa13.51□□□□□ -0.25
CDH1-204ENST00000562118 DHPSP49366 369 aaPredicted RBP13.51□□□□□ -0.25
CDH1-204ENST00000562118 POLR2LP62875 67 aaKnown RBP13.51□□□□□ -0.25
CDH1-204ENST00000562118 RPS21P63220 83 aaKnown RBP13.51□□□□□ -0.25
CDH1-204ENST00000562118 CSRP2Q16527 193 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms