RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 COPG2Q9UBF2 871 aa11.74□□□□□ -0.53
PCAT1-202ENST00000561978 AFF4Q9UHB7 1163 aaKnown RBP11.74□□□□□ -0.53
PCAT1-202ENST00000561978 NUDT5Q9UKK9 219 aa11.74□□□□□ -0.53
PCAT1-202ENST00000561978 TRIM33Q9UPN9 1127 aa11.74□□□□□ -0.53
PCAT1-202ENST00000561978 SORCS3Q9UPU3 1222 aa11.74□□□□□ -0.53
PCAT1-202ENST00000561978 CCL16O15467 120 aa11.73□□□□□ -0.53
PCAT1-202ENST00000561978 GSRP00390 522 aa11.73□□□□□ -0.53
PCAT1-202ENST00000561978 CPA3P15088 417 aa11.73□□□□□ -0.53
PCAT1-202ENST00000561978 NMBRP28336 390 aa11.73□□□□□ -0.53
PCAT1-202ENST00000561978 ADRA1AP35348 466 aa11.73□□□□□ -0.53
PCAT1-202ENST00000561978 PEX19P40855 299 aa11.73□□□□□ -0.53
PCAT1-202ENST00000561978 SLC1A6P48664 564 aa11.73□□□□□ -0.53
PCAT1-202ENST00000561978 RPL10AP62906 217 aaKnown RBP11.73□□□□□ -0.53
PCAT1-202ENST00000561978 EFEMP1Q12805 493 aa11.73□□□□□ -0.53
PCAT1-202ENST00000561978 PIK3R6Q5UE93 754 aa11.73□□□□□ -0.53
PCAT1-202ENST00000561978 TPGS2Q68CL5 300 aa11.73□□□□□ -0.53
PCAT1-202ENST00000561978 C14orf80Q86SX3 495 aa11.73□□□□□ -0.53
PCAT1-202ENST00000561978 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.73□□□□□ -0.53
PCAT1-202ENST00000561978 IPMKQ8NFU5 416 aa11.73□□□□□ -0.53
PCAT1-202ENST00000561978 SPATA22Q8NHS9 363 aa11.73□□□□□ -0.53
PCAT1-202ENST00000561978 PIWIL2Q8TC59 973 aaKnown RBP11.73□□□□□ -0.53
PCAT1-202ENST00000561978 CEP295NLQ96MC4 621 aa11.73□□□□□ -0.53
PCAT1-202ENST00000561978 CDK5RAP1Q96SZ6 601 aaKnown RBP11.73□□□□□ -0.53
PCAT1-202ENST00000561978 AGAP2Q99490 1192 aa11.73□□□□□ -0.53
PCAT1-202ENST00000561978 SEPT5Q99719 369 aaPredicted RBP11.73□□□□□ -0.53
PCAT1-202ENST00000561978 SFXN1Q9H9B4 322 aa11.73□□□□□ -0.53
PCAT1-202ENST00000561978 VPS45Q9NRW7 570 aa11.73□□□□□ -0.53
PCAT1-202ENST00000561978 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.73□□□□□ -0.53
PCAT1-202ENST00000561978 IL1RAPL1Q9NZN1 696 aa11.73□□□□□ -0.53
PCAT1-202ENST00000561978 MPP6Q9NZW5 540 aa11.73□□□□□ -0.53
PCAT1-202ENST00000561978 CD207Q9UJ71 328 aa11.73□□□□□ -0.53
PCAT1-202ENST00000561978 TLK1Q9UKI8 766 aa11.73□□□□□ -0.53
PCAT1-202ENST00000561978 HBS1LQ9Y450 684 aaKnown RBP11.73□□□□□ -0.53
PCAT1-202ENST00000561978 MYO16Q9Y6X6 1858 aa11.73□□□□□ -0.53
PCAT1-202ENST00000561978 IGLV3-10A0A075B6K4 115 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 A0A096LPK6 155 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 CBX6O95503 412 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 MT-CYBP00156 380 aaPredicted RBP11.72□□□□□ -0.53
PCAT1-202ENST00000561978 RALBP11234 206 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 ESRRAP11474 423 aaPredicted RBP11.72□□□□□ -0.53
PCAT1-202ENST00000561978 FGF3P11487 239 aaPredicted RBP11.72□□□□□ -0.53
PCAT1-202ENST00000561978 COL6A2P12110 1019 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 EZRP15311 586 aaKnown RBP11.72□□□□□ -0.53
PCAT1-202ENST00000561978 NAT1P18440 290 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 AQP5P55064 265 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 IRX4P78413 519 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 RING1Q06587 406 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 PCLAFQ15004 111 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 MS4A13Q5J8X5 152 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 PPM1JQ5JR12 505 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 PPM1LQ5SGD2 360 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 ARTNQ5T4W7 220 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 SDHAF4Q5VUM1 108 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 RANBP10Q6VN20 620 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 CNTN4Q8IWV2 1026 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 GPR22Q99680 433 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 BTBD10Q9BSF8 475 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 MCMBPQ9BTE3 642 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 FICDQ9BVA6 458 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 TBC1D10AQ9BXI6 508 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 S1PR5Q9H228 398 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 RHOJQ9H4E5 214 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 RETREG1Q9H6L5 497 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 ARNT2Q9HBZ2 717 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 DZANK1Q9NVP4 752 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 TMEM216Q9P0N5 145 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 MARCH2Q9P0N8 246 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 DPP7Q9UHL4 492 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 FCHO1O14526 889 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 HLA-DQB2P05538 268 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 IL9P15248 144 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 HOXB8P17481 243 aaPredicted RBP11.72□□□□□ -0.53
PCAT1-202ENST00000561978 GPR15P49685 360 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 PRKAA2P54646 552 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 USP46P62068 366 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 MGAT5BQ3V5L5 792 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 MARC1Q5VT66 337 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 DENND5AQ6IQ26 1287 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 PTCRAQ6ISU1 281 aaPredicted RBP11.72□□□□□ -0.53
PCAT1-202ENST00000561978 LONP2Q86WA8 852 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 TCEAL8Q8IYN2 117 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 ZNF683Q8IZ20 524 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 LSM14AQ8ND56 463 aaKnown RBP11.72□□□□□ -0.53
PCAT1-202ENST00000561978 RDH11Q8TC12 318 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 GPR152Q8TDT2 470 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 ZNF707Q96C28 371 aaPredicted RBP11.72□□□□□ -0.53
PCAT1-202ENST00000561978 PTCD3Q96EY7 689 aaKnown RBP11.72□□□□□ -0.53
PCAT1-202ENST00000561978 VPS39Q96JC1 886 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 RILPQ96NA2 401 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 NDFIP2Q9NV92 336 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 MAGED2Q9UNF1 606 aaPredicted RBP11.72□□□□□ -0.53
PCAT1-202ENST00000561978 TCAF1Q9Y4C2 921 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 INSL5Q9Y5Q6 135 aa11.72□□□□□ -0.53
PCAT1-202ENST00000561978 GRXCR2A6NFK2 248 aa11.71□□□□□ -0.53
PCAT1-202ENST00000561978 DRGXA6NNA5 263 aa11.71□□□□□ -0.53
PCAT1-202ENST00000561978 PMPCBO75439 489 aa11.71□□□□□ -0.53
PCAT1-202ENST00000561978 TOP3BO95985 862 aaKnown RBP11.71□□□□□ -0.53
PCAT1-202ENST00000561978 C2P06681 752 aa11.71□□□□□ -0.53
PCAT1-202ENST00000561978 KITP10721 976 aa11.71□□□□□ -0.53
PCAT1-202ENST00000561978 HAPLN1P10915 354 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms