RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 CSRP3P50461 194 aa11.07□□□□□ -0.64
NEIL1-202ENST00000561643 GEMP55040 296 aa11.07□□□□□ -0.64
NEIL1-202ENST00000561643 ZNF33AQ06730 810 aa11.07□□□□□ -0.64
NEIL1-202ENST00000561643 CNGA3Q16281 694 aa11.07□□□□□ -0.64
NEIL1-202ENST00000561643 MORN1Q5T089 497 aa11.07□□□□□ -0.64
NEIL1-202ENST00000561643 ZNF470Q6ECI4 717 aa11.07□□□□□ -0.64
NEIL1-202ENST00000561643 TMEM53Q6P2H8 277 aa11.07□□□□□ -0.64
NEIL1-202ENST00000561643 IYDQ6PHW0 289 aa11.07□□□□□ -0.64
NEIL1-202ENST00000561643 SETD3Q86TU7 594 aaPredicted RBP11.07□□□□□ -0.64
NEIL1-202ENST00000561643 ARHGAP12Q8IWW6 846 aa11.07□□□□□ -0.64
NEIL1-202ENST00000561643 PIP4K2CQ8TBX8 421 aa11.07□□□□□ -0.64
NEIL1-202ENST00000561643 RTP3Q9BQQ7 232 aa11.07□□□□□ -0.64
NEIL1-202ENST00000561643 MRPL1Q9BYD6 325 aaKnown RBP11.07□□□□□ -0.64
NEIL1-202ENST00000561643 TRPV2Q9Y5S1 764 aa11.07□□□□□ -0.64
NEIL1-202ENST00000561643 H3BNX3 289 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 EIF3FO00303 357 aaPredicted RBP11.06□□□□□ -0.64
NEIL1-202ENST00000561643 PAGE1O75459 146 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 JUNP05412 331 aaKnown RBP11.06□□□□□ -0.64
NEIL1-202ENST00000561643 PAMP19021 973 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 CYP2C18P33260 490 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 SLC1A2P43004 574 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 BRCC3P46736 316 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 XIAPP98170 497 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 PURAQ00577 322 aaKnown RBP11.06□□□□□ -0.64
NEIL1-202ENST00000561643 FLOT2Q14254 428 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 GK3PQ14409 553 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 LPIN1Q14693 890 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 BTBD8Q5XKL5 378 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 ICA1LQ8NDH6 482 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 ZNF419Q96HQ0 510 aaPredicted RBP11.06□□□□□ -0.64
NEIL1-202ENST00000561643 SLC39A8Q9C0K1 460 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 RBM38Q9H0Z9 239 aaKnown RBP11.06□□□□□ -0.64
NEIL1-202ENST00000561643 CATSPERBQ9H7T0 1116 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 RBM22Q9NW64 420 aaKnown RBP eCLIP11.06□□□□□ -0.64
NEIL1-202ENST00000561643 TCAF1Q9Y4C2 921 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 H3BSA7 217 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 MSI1O43347 362 aaKnown RBP11.06□□□□□ -0.64
NEIL1-202ENST00000561643 CACNG3O60359 315 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 TRMUO75648 421 aaKnown RBP11.06□□□□□ -0.64
NEIL1-202ENST00000561643 MOCS2O96007 188 aaPredicted RBP11.06□□□□□ -0.64
NEIL1-202ENST00000561643 POMCP01189 267 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 PIM1P11309 404 aaPredicted RBP11.06□□□□□ -0.64
NEIL1-202ENST00000561643 RPL9P32969 192 aaKnown RBP11.06□□□□□ -0.64
NEIL1-202ENST00000561643 PSMD7P51665 324 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 PKNOX1P55347 436 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 NAA20P61599 178 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 ART3Q13508 389 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 UPP1Q16831 310 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 POTEHQ6S545 545 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 AGMOQ6ZNB7 445 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 CNTN4Q8IWV2 1026 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 RAVER1Q8IY67 606 aaKnown RBP11.06□□□□□ -0.64
NEIL1-202ENST00000561643 LSMEM2Q8N112 164 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 NUP93Q8N1F7 819 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 LRRC43Q8N309 656 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 USP13Q92995 863 aaPredicted RBP11.06□□□□□ -0.64
NEIL1-202ENST00000561643 SPATA17Q96L03 361 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 TRIM62Q9BVG3 475 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 TRPV6Q9H1D0 765 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 MRPL46Q9H2W6 279 aaKnown RBP11.06□□□□□ -0.64
NEIL1-202ENST00000561643 TMLHEQ9NVH6 421 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 FAIMQ9NVQ4 179 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 GTSE1Q9NYZ3 720 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 SFMBT1Q9UHJ3 866 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 RABL2BQ9UNT1 228 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 INPP5FQ9Y2H2 1132 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 FIS1Q9Y3D6 152 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 TMEM233B4DJY2 109 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 MATN3O15232 486 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 IRAK2O43187 625 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 MAFKO60675 156 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 HLA-DQB2P05538 268 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 TFPTP0C1Z6 253 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 MSX2P35548 267 aaPredicted RBP11.06□□□□□ -0.64
NEIL1-202ENST00000561643 THOP1P52888 689 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 TAS2R39P59534 338 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 PCSK7Q16549 785 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 ZNF362Q5T0B9 420 aaPredicted RBP11.06□□□□□ -0.64
NEIL1-202ENST00000561643 SPRYD7Q5W111 196 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 DENND5AQ6IQ26 1287 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 MFSD6LQ8IWD5 586 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 RNF148Q8N7C7 305 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 FCRL2Q96LA5 508 aaPredicted RBP11.06□□□□□ -0.64
NEIL1-202ENST00000561643 PRPF18Q99633 342 aaKnown RBP11.06□□□□□ -0.64
NEIL1-202ENST00000561643 IL12RB2Q99665 862 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 ACBD6Q9BR61 282 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 ENTPD7Q9NQZ7 604 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 CHST12Q9NRB3 414 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 NCKIPSDQ9NZQ3 722 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 NUDT5Q9UKK9 219 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 PSMD13Q9UNM6 376 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 GIT1Q9Y2X7 761 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 DTNAQ9Y4J8 743 aa11.06□□□□□ -0.64
NEIL1-202ENST00000561643 IQCA1LA6NCM1 817 aa11.05□□□□□ -0.64
NEIL1-202ENST00000561643 TMEM247A6NEH6 219 aa11.05□□□□□ -0.64
NEIL1-202ENST00000561643 TARM1B6A8C7 271 aa11.05□□□□□ -0.64
NEIL1-202ENST00000561643 ARNTP27540 789 aa11.05□□□□□ -0.64
NEIL1-202ENST00000561643 CCR1P32246 355 aa11.05□□□□□ -0.64
NEIL1-202ENST00000561643 CHRNA4P43681 627 aa11.05□□□□□ -0.64
NEIL1-202ENST00000561643 STT3AP46977 705 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms